We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
913.1
nTPM
FANTOM5:
2355.9
Scaled Tags Per Million
Pig:
688.5
nTPM
Allen mouse:
20.9
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
913.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 576.4
2188
Female, age 91, both hemispheres
650.4
2090
Male, age 80, both hemispheres
577.2
1984
Male, age 76, both hemispheres
545.2
2301
Female, age 85, both hemispheres
532.9
Dorsal cochlear nucleus nTPM: 620.7
2187
Female, age 91, both hemispheres
709.6
2802
Male, age 74, right hemisphere
697.4
2370
Male, age 61, both hemispheres
591.0
2378
Male, age 80, both hemispheres
563.8
2058
Male, age 76, both hemispheres
541.9
Dorsal tegmental nucleus nTPM: 638.9
2083
Male, age 80, both hemispheres
729.7
2326
Male, age 74, both hemispheres
675.9
2358
Male, age 61, both hemispheres
621.1
1936
Male, age 76, left hemisphere
528.8
Dorsolateral tegmental area nTPM: 658.8
2654
Male, age 80, both hemispheres
714.0
2360
Male, age 74, both hemispheres
668.8
2751
Female, age 85, both hemispheres
665.9
2337
Male, age 61, both hemispheres
636.3
2141
Male, age 76, both hemispheres
609.0
Kolliker-Fuse nucleus nTPM: 683.7
2163
Male, age 80, both hemispheres
766.7
2793
Female, age 91, left hemisphere
679.6
2315
Male, age 76, right hemisphere
604.8
Lateral lemniscal nuclei nTPM: 754.7
2169
Male, age 76, both hemispheres
901.4
2746
Female, age 85, left hemisphere
794.0
2036
Male, age 80, both hemispheres
780.7
2453
Male, age 74, right hemisphere
719.7
2320
Female, age 91, left hemisphere
577.9
Lateral parabrachial nucleus nTPM: 649.9
2139
Female, age 85, right hemisphere
859.3
2013
Male, age 80, both hemispheres
691.1
2792
Male, age 76, both hemispheres
542.2
2790
Male, age 61, both hemispheres
507.0
Lateral vestibular nucleus nTPM: 652.8
2184
Male, age 76, both hemispheres
681.8
2311
Male, age 80, both hemispheres
623.9
Locus coeruleus nTPM: 913.1
2014
Male, age 55, unknown
1143.7
2123
Female, age 91, both hemispheres
1076.0
2720
Male, age 74, both hemispheres
936.8
2788
Male, age 74, unknown
925.0
2317
Female, age 72, unknown
854.7
1980
Male, age 76, both hemispheres
767.8
2162
Male, age 80, both hemispheres
687.9
Medial parabrachial nucleus nTPM: 657.5
2170
Female, age 91, both hemispheres
789.5
2854
Male, age 80, both hemispheres
753.7
2463
Female, age 85, right hemisphere
626.8
2786
Male, age 76, both hemispheres
569.0
2156
Male, age 61, both hemispheres
548.4
Medial periolivary nuclei nTPM: 746.8
2171
Female, age 85, both hemispheres
994.6
2063
Male, age 76, both hemispheres
893.1
2791
Male, age 74, right hemisphere
717.0
2081
Male, age 80, both hemispheres
594.0
2458
Female, age 91, both hemispheres
535.1
Motor facial nucleus nTPM: 712.9
2062
Male, age 76, both hemispheres
906.5
2365
Male, age 74, right hemisphere
785.9
2697
Female, age 85, both hemispheres
690.2
2126
Male, age 61, both hemispheres
650.1
2795
Female, age 91, both hemispheres
649.9
2327
Male, age 80, both hemispheres
594.9
Motor trigeminal nucleus nTPM: 633.0
2079
Male, age 80, both hemispheres
710.6
2560
Male, age 74, both hemispheres
665.2
2335
Male, age 61, both hemispheres
632.9
2309
Male, age 76, both hemispheres
581.2
2321
Female, age 91, both hemispheres
575.3
Nuclei of the trapezoid body nTPM: 756.8
2735
Female, age 85, both hemispheres
948.0
1983
Male, age 76, both hemispheres
869.1
2159
Male, age 61, both hemispheres
769.4
2166
Male, age 80, both hemispheres
637.5
2368
Female, age 91, both hemispheres
560.1
Nucleus raphe magnus nTPM: 768.1
2172
Female, age 85, both hemispheres
982.9
2160
Male, age 61, both hemispheres
903.2
2455
Male, age 74, both hemispheres
820.5
2051
Male, age 76, both hemispheres
658.2
2328
Male, age 80, both hemispheres
635.6
2459
Female, age 91, both hemispheres
608.1
Paramedian reticular nucleus nTPM: 752.3
2050
Female, age 85, both hemispheres
945.7
2057
Male, age 80, both hemispheres
748.0
2313
Male, age 61, both hemispheres
719.5
2052
Male, age 76, both hemispheres
595.8
Pedunculopontine tegmental nucleus nTPM: 678.7
2334
Male, age 80, both hemispheres
711.1
1921
Female, age 85, both hemispheres
698.3
2338
Male, age 61, both hemispheres
626.9
Pontine nuclei nTPM: 836.1
2787
Female, age 85, both hemispheres
1111.8
1863
Male, age 55, unknown
1080.2
2727
Male, age 61, right hemisphere
908.1
2109
Female, age 72, unknown
906.0
1968
Male, age 76, left hemisphere
747.6
2454
Male, age 74, left hemisphere
723.5
2319
Female, age 91, both hemispheres
642.6
2115
Male, age 80, left hemisphere
569.2
Pontine raphe nucleus nTPM: 834.6
2122
Female, age 85, midline
950.1
2853
Male, age 76, midline
719.0
Posteroventral cochlear nucleus nTPM: 636.7
2752
Female, age 85, both hemispheres
764.9
2371
Male, age 61, both hemispheres
637.1
2135
Female, age 91, both hemispheres
604.9
2070
Male, age 76, both hemispheres
595.3
2341
Male, age 80, both hemispheres
581.3
Principal sensory trigeminal nucleus nTPM: 686.1
2008
Male, age 80, left hemisphere
780.9
2158
Male, age 61, both hemispheres
746.6
2367
Female, age 91, left hemisphere
611.5
2324
Male, age 76, both hemispheres
605.3
Reticular pontine nucleus, caudal nTPM: 648.3
2092
Male, age 76, both hemispheres
751.8
2332
Male, age 80, right hemisphere
641.9
2559
Male, age 74, both hemispheres
636.4
2457
Female, age 91, both hemispheres
563.2
Reticular pontine nucleus, oral nTPM: 721.2
2012
Female, age 85, both hemispheres
862.3
2361
Male, age 74, both hemispheres
818.5
1939
Male, age 80, both hemispheres
732.6
2167
Male, age 76, both hemispheres
607.7
2366
Female, age 91, both hemispheres
585.2
Reticulotegmental nucleus nTPM: 688.0
2325
Male, age 76, both hemispheres
791.9
2452
Male, age 74, both hemispheres
690.0
2322
Female, age 91, both hemispheres
646.6
2333
Male, age 80, both hemispheres
623.4
Spinal trigeminal nucleus, oral nTPM: 619.5
2737
Female, age 85, both hemispheres
682.0
2164
Male, age 80, both hemispheres
670.0
1978
Male, age 76, both hemispheres
506.6
Subcoeruleus area nTPM: 677.0
1958
Male, age 80, both hemispheres
772.5
2323
Female, age 91, left hemisphere
757.4
2089
Male, age 76, left hemisphere
637.3
2451
Male, age 74, both hemispheres
628.1
2369
Female, age 85, left hemisphere
589.5
Superior olive nTPM: 736.5
1875
Female, age 85, both hemispheres
1020.0
2364
Male, age 74, right hemisphere
770.0
2020
Male, age 76, both hemispheres
734.3
2329
Male, age 80, right hemisphere
602.2
2561
Female, age 91, both hemispheres
555.8
Ventral periolivary nuclei nTPM: 746.2
2130
Female, age 85, both hemispheres
896.6
2165
Male, age 80, both hemispheres
760.4
2023
Male, age 76, both hemispheres
744.8
2794
Female, age 91, left hemisphere
583.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 715.6
2359
Male, age 61, both hemispheres
843.1
2840
Female, age 85, both hemispheres
785.4
2449
Male, age 74, both hemispheres
763.6
1959
Male, age 76, both hemispheres
696.9
2161
Male, age 80, both hemispheres
648.3
2456
Female, age 91, both hemispheres
556.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
688.5
Pig sample
Sample description
nTPM
Pons nTPM: 688.5
Samples: 4
Max nTPM: 760.4
Min nTPM: 607.1
Sample A
Female
742.9
Sample B
Female
607.1
Sample C
Male
760.4
Sample D
Male
643.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
