PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:913.1 nTPM
FANTOM5:2355.9 Scaled Tags Per Million
Pig:688.5 nTPM
Mouse:1075.7 nTPM
Allen mouse:21.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 913.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 576.4
2188 Female, age 91, both hemispheres 650.4
2090 Male, age 80, both hemispheres 577.2
1984 Male, age 76, both hemispheres 545.2
2301 Female, age 85, both hemispheres 532.9
Area postrema
nTPM: 494.6
2054 Male, age 76, both hemispheres 522.5
2799 Male, age 61, both hemispheres 483.5
2306 Male, age 80, both hemispheres 477.9
Dorsal cochlear nucleus
nTPM: 620.7
2187 Female, age 91, both hemispheres 709.6
2802 Male, age 74, right hemisphere 697.4
2370 Male, age 61, both hemispheres 591.0
2378 Male, age 80, both hemispheres 563.8
2058 Male, age 76, both hemispheres 541.9
Dorsal medullary reticular nucleus
nTPM: 622.7
2040 Female, age 85, both hemispheres 907.7
2373 Male, age 61, both hemispheres 499.3
2088 Male, age 76, both hemispheres 461.1
Dorsal motor vagal complex
nTPM: 571.1
2844 Male, age 55, unknown 766.5
2133 Female, age 91, both hemispheres 758.2
2000 Male, age 74, unknown 711.1
2813 Female, age 72, unknown 637.2
2643 Male, age 74, both hemispheres 484.7
2185 Male, age 76, both hemispheres 415.8
2797 Male, age 61, both hemispheres 409.7
2807 Female, age 85, both hemispheres 385.8
Dorsal tegmental nucleus
nTPM: 638.9
2083 Male, age 80, both hemispheres 729.7
2326 Male, age 74, both hemispheres 675.9
2358 Male, age 61, both hemispheres 621.1
1936 Male, age 76, left hemisphere 528.8
Dorsolateral tegmental area
nTPM: 658.8
2654 Male, age 80, both hemispheres 714.0
2360 Male, age 74, both hemispheres 668.8
2751 Female, age 85, both hemispheres 665.9
2337 Male, age 61, both hemispheres 636.3
2141 Male, age 76, both hemispheres 609.0
Gigantocellular reticular nuclei, medullary
nTPM: 681.6
2462 Male, age 74, both hemispheres 775.7
1876 Female, age 85, both hemispheres 705.9
2314 Male, age 61, both hemispheres 697.5
2387 Female, age 91, both hemispheres 685.8
2022 Male, age 76, right hemisphere 629.8
2310 Male, age 80, both hemispheres 594.7
Gigantocellular reticular nuclei, pars
nTPM: 663.2
2168 Male, age 76, both hemispheres 838.8
2084 Female, age 85, both hemispheres 747.4
2336 Male, age 61, both hemispheres 648.1
2706 Male, age 80, both hemispheres 554.7
2330 Male, age 80, both hemispheres 527.1
Inferior olive
nTPM: 578.9
2563 Male, age 74, both hemispheres 647.4
2178 Male, age 61, both hemispheres 630.4
2628 Female, age 91, both hemispheres 617.0
2379 Male, age 80, both hemispheres 513.2
2085 Female, age 85, both hemispheres 486.4
Kolliker-Fuse nucleus
nTPM: 683.7
2163 Male, age 80, both hemispheres 766.7
2793 Female, age 91, left hemisphere 679.6
2315 Male, age 76, right hemisphere 604.8
Lateral lemniscal nuclei
nTPM: 754.7
2169 Male, age 76, both hemispheres 901.4
2746 Female, age 85, left hemisphere 794.0
2036 Male, age 80, both hemispheres 780.7
2453 Male, age 74, right hemisphere 719.7
2320 Female, age 91, left hemisphere 577.9
Lateral medullary reticular nucleus
nTPM: 623.0
2044 Male, age 76, both hemispheres 766.6
2305 Male, age 74, both hemispheres 658.1
2804 Female, age 91, both hemispheres 633.6
2374 Male, age 61, both hemispheres 593.5
2852 Male, age 80, both hemispheres 575.3
2190 Female, age 85, both hemispheres 511.1
Lateral parabrachial nucleus
nTPM: 649.9
2139 Female, age 85, right hemisphere 859.3
2013 Male, age 80, both hemispheres 691.1
2792 Male, age 76, both hemispheres 542.2
2790 Male, age 61, both hemispheres 507.0
Lateral vestibular nucleus
nTPM: 652.8
2184 Male, age 76, both hemispheres 681.8
2311 Male, age 80, both hemispheres 623.9
Locus coeruleus
nTPM: 913.1
2014 Male, age 55, unknown 1143.7
2123 Female, age 91, both hemispheres 1076.0
2720 Male, age 74, both hemispheres 936.8
2788 Male, age 74, unknown 925.0
2317 Female, age 72, unknown 854.7
1980 Male, age 76, both hemispheres 767.8
2162 Male, age 80, both hemispheres 687.9
Medial olivary nucleus
nTPM: 630.1
1943 Male, age 61, both hemispheres 781.8
2138 Female, age 91, both hemispheres 646.8
2851 Male, age 80, both hemispheres 597.1
1962 Male, age 76, both hemispheres 494.8
Medial parabrachial nucleus
nTPM: 657.5
2170 Female, age 91, both hemispheres 789.5
2854 Male, age 80, both hemispheres 753.7
2463 Female, age 85, right hemisphere 626.8
2786 Male, age 76, both hemispheres 569.0
2156 Male, age 61, both hemispheres 548.4
Medial periolivary nuclei
nTPM: 746.8
2171 Female, age 85, both hemispheres 994.6
2063 Male, age 76, both hemispheres 893.1
2791 Male, age 74, right hemisphere 717.0
2081 Male, age 80, both hemispheres 594.0
2458 Female, age 91, both hemispheres 535.1
Medial vestibular nucleus
nTPM: 747.9
2803 Female, age 91, both hemispheres 795.4
2801 Male, age 74, both hemispheres 784.2
2134 Male, age 76, both hemispheres 758.5
2624 Male, age 61, both hemispheres 734.9
2743 Female, age 85, both hemispheres 725.6
2093 Male, age 80, both hemispheres 688.8
Motor facial nucleus
nTPM: 712.9
2062 Male, age 76, both hemispheres 906.5
2365 Male, age 74, right hemisphere 785.9
2697 Female, age 85, both hemispheres 690.2
2126 Male, age 61, both hemispheres 650.1
2795 Female, age 91, both hemispheres 649.9
2327 Male, age 80, both hemispheres 594.9
Motor hypoglossal nucleus
nTPM: 617.3
2125 Female, age 91, both hemispheres 750.3
2132 Female, age 85, both hemispheres 736.9
2461 Male, age 61, both hemispheres 575.4
2182 Male, age 80, both hemispheres 560.4
2277 Male, age 76, both hemispheres 463.5
Motor trigeminal nucleus
nTPM: 633.0
2079 Male, age 80, both hemispheres 710.6
2560 Male, age 74, both hemispheres 665.2
2335 Male, age 61, both hemispheres 632.9
2309 Male, age 76, both hemispheres 581.2
2321 Female, age 91, both hemispheres 575.3
Nuclei of the trapezoid body
nTPM: 756.8
2735 Female, age 85, both hemispheres 948.0
1983 Male, age 76, both hemispheres 869.1
2159 Male, age 61, both hemispheres 769.4
2166 Male, age 80, both hemispheres 637.5
2368 Female, age 91, both hemispheres 560.1
Nucleus ambiguus
nTPM: 566.4
2096 Female, age 85, both hemispheres 659.2
2071 Male, age 76, both hemispheres 473.6
Nucleus cuneatus
nTPM: 505.0
2376 Male, age 61, both hemispheres 689.8
2564 Male, age 74, both hemispheres 553.7
2131 Male, age 76, both hemispheres 549.9
2380 Male, age 80, both hemispheres 501.1
2381 Male, age 80, both hemispheres 491.1
2562 Male, age 61, both hemispheres 483.4
2805 Female, age 91, both hemispheres 458.1
2100 Male, age 76, both hemispheres 442.3
2808 Female, age 85, both hemispheres 375.6
Nucleus gracilis
nTPM: 473.9
2627 Male, age 74, both hemispheres 576.9
2382 Male, age 80, both hemispheres 495.9
2299 Female, age 85, both hemispheres 349.0
Nucleus raphe magnus
nTPM: 768.1
2172 Female, age 85, both hemispheres 982.9
2160 Male, age 61, both hemispheres 903.2
2455 Male, age 74, both hemispheres 820.5
2051 Male, age 76, both hemispheres 658.2
2328 Male, age 80, both hemispheres 635.6
2459 Female, age 91, both hemispheres 608.1
Nucleus raphe obscurus
nTPM: 569.5
2800 Male, age 61, midline 713.3
2845 Female, age 85, midline 591.3
2142 Male, age 76, midline 403.9
Nucleus raphe pallidus
nTPM: 664.2
1924 Male, age 61, midline 809.7
2183 Male, age 80, midline 779.4
2145 Male, age 76, midline 403.5
Nucleus tractus solitarii
nTPM: 571.0
2144 Female, age 91, right hemisphere 810.2
2656 Male, age 76, both hemispheres 553.3
2191 Female, age 85, both hemispheres 488.0
2307 Male, age 80, both hemispheres 432.6
Paramedian reticular nucleus
nTPM: 752.3
2050 Female, age 85, both hemispheres 945.7
2057 Male, age 80, both hemispheres 748.0
2313 Male, age 61, both hemispheres 719.5
2052 Male, age 76, both hemispheres 595.8
Parvicellular reticular nuclei
nTPM: 672.5
2119 Male, age 80, both hemispheres 726.4
2558 Male, age 74, both hemispheres 657.7
2095 Male, age 76, both hemispheres 633.3
Parvicellular reticular nuclei, medullary
nTPM: 721.4
2189 Female, age 91, both hemispheres 810.0
2091 Female, age 85, both hemispheres 717.8
2181 Male, age 80, left hemisphere 636.5
Pedunculopontine tegmental nucleus
nTPM: 678.7
2334 Male, age 80, both hemispheres 711.1
1921 Female, age 85, both hemispheres 698.3
2338 Male, age 61, both hemispheres 626.9
Peritrigeminal nucleus
nTPM: 671.0
2179 Male, age 61, both hemispheres 680.7
2136 Male, age 76, both hemispheres 677.8
2067 Female, age 85, both hemispheres 654.4
Pontine nuclei
nTPM: 836.1
2787 Female, age 85, both hemispheres 1111.8
1863 Male, age 55, unknown 1080.2
2727 Male, age 61, right hemisphere 908.1
2109 Female, age 72, unknown 906.0
1968 Male, age 76, left hemisphere 747.6
2454 Male, age 74, left hemisphere 723.5
2319 Female, age 91, both hemispheres 642.6
2115 Male, age 80, left hemisphere 569.2
Pontine raphe nucleus
nTPM: 834.6
2122 Female, age 85, midline 950.1
2853 Male, age 76, midline 719.0
Posteroventral cochlear nucleus
nTPM: 636.7
2752 Female, age 85, both hemispheres 764.9
2371 Male, age 61, both hemispheres 637.1
2135 Female, age 91, both hemispheres 604.9
2070 Male, age 76, both hemispheres 595.3
2341 Male, age 80, both hemispheres 581.3
Prepositus hypoglossal nucleus
nTPM: 688.9
2855 Female, age 85, right hemisphere 764.5
2086 Male, age 80, both hemispheres 613.3
Principal sensory trigeminal nucleus
nTPM: 686.1
2008 Male, age 80, left hemisphere 780.9
2158 Male, age 61, both hemispheres 746.6
2367 Female, age 91, left hemisphere 611.5
2324 Male, age 76, both hemispheres 605.3
Reticular pontine nucleus, caudal
nTPM: 648.3
2092 Male, age 76, both hemispheres 751.8
2332 Male, age 80, right hemisphere 641.9
2559 Male, age 74, both hemispheres 636.4
2457 Female, age 91, both hemispheres 563.2
Reticular pontine nucleus, oral
nTPM: 721.2
2012 Female, age 85, both hemispheres 862.3
2361 Male, age 74, both hemispheres 818.5
1939 Male, age 80, both hemispheres 732.6
2167 Male, age 76, both hemispheres 607.7
2366 Female, age 91, both hemispheres 585.2
Reticulotegmental nucleus
nTPM: 688.0
2325 Male, age 76, both hemispheres 791.9
2452 Male, age 74, both hemispheres 690.0
2322 Female, age 91, both hemispheres 646.6
2333 Male, age 80, both hemispheres 623.4
Spinal trigeminal nucleus, caudal
nTPM: 613.2
2390 Female, age 91, both hemispheres 886.1
2312 Male, age 61, both hemispheres 627.2
2447 Male, age 76, both hemispheres 549.6
2308 Male, age 80, both hemispheres 508.3
2642 Male, age 74, both hemispheres 495.0
Spinal trigeminal nucleus, interpolar
nTPM: 751.6
2066 Male, age 76, right hemisphere 910.2
2625 Male, age 61, both hemispheres 797.6
2033 Male, age 80, both hemispheres 718.5
2389 Female, age 91, both hemispheres 716.0
2386 Female, age 85, both hemispheres 615.6
Spinal trigeminal nucleus, oral
nTPM: 619.5
2737 Female, age 85, both hemispheres 682.0
2164 Male, age 80, both hemispheres 670.0
1978 Male, age 76, both hemispheres 506.6
Spinal vestibular nucleus
nTPM: 676.4
2186 Female, age 91, both hemispheres 729.4
2780 Male, age 80, both hemispheres 694.4
2796 Male, age 61, both hemispheres 680.3
2806 Female, age 85, both hemispheres 678.9
2384 Male, age 74, both hemispheres 672.2
2748 Male, age 76, both hemispheres 603.4
Subcoeruleus area
nTPM: 677.0
1958 Male, age 80, both hemispheres 772.5
2323 Female, age 91, left hemisphere 757.4
2089 Male, age 76, left hemisphere 637.3
2451 Male, age 74, both hemispheres 628.1
2369 Female, age 85, left hemisphere 589.5
Superior olive
nTPM: 736.5
1875 Female, age 85, both hemispheres 1020.0
2364 Male, age 74, right hemisphere 770.0
2020 Male, age 76, both hemispheres 734.3
2329 Male, age 80, right hemisphere 602.2
2561 Female, age 91, both hemispheres 555.8
Superior vestibular nucleus
nTPM: 680.2
2383 Male, age 74, both hemispheres 746.4
2015 Male, age 80, both hemispheres 726.7
2061 Male, age 76, both hemispheres 567.5
Ventral medullary reticular nucleus
nTPM: 586.6
2372 Male, age 61, both hemispheres 589.7
2060 Male, age 76, both hemispheres 583.6
Ventral periolivary nuclei
nTPM: 746.2
2130 Female, age 85, both hemispheres 896.6
2165 Male, age 80, both hemispheres 760.4
2023 Male, age 76, both hemispheres 744.8
2794 Female, age 91, left hemisphere 583.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 647.9
1986 Male, age 76, both hemispheres 710.9
2180 Male, age 61, both hemispheres 695.9
2741 Female, age 85, both hemispheres 675.4
2302 Female, age 91, both hemispheres 618.3
2118 Male, age 80, both hemispheres 539.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 715.6
2359 Male, age 61, both hemispheres 843.1
2840 Female, age 85, both hemispheres 785.4
2449 Male, age 74, both hemispheres 763.6
1959 Male, age 76, both hemispheres 696.9
2161 Male, age 80, both hemispheres 648.3
2456 Female, age 91, both hemispheres 556.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 2355.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1779.6
FF:10165-103B3 76 years, female 1948.4
FF:10182-103D2 60 years, female 1610.8
Medulla oblongata
Scaled Tags Per Million: 1597.1
FF:10155-103A2 76 years, female 1751.6
FF:10174-103C3 60 years, female 1604.3
FF:10038-101F2 18-64 years, mixed 1435.6
Pons
Scaled Tags Per Million: 2355.9
FF:10033-101E6 18-54 years, mixed 2355.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 688.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 549.4
Samples: 4

Max nTPM: 627.0
Min nTPM: 457.4
Sample A Female 550.8
Sample B Female 562.4
Sample C Male 627.0
Sample D Male 457.4
Pons
nTPM: 688.5
Samples: 4

Max nTPM: 760.4
Min nTPM: 607.1
Sample A Female 742.9
Sample B Female 607.1
Sample C Male 760.4
Sample D Male 643.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1075.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1075.7
Samples: 4

Max nTPM: 1104.8
Min nTPM: 1028.2
Sample A Male 1028.2
Sample B Male 1068.3
Sample C Female 1104.8
Sample D Female 1101.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 21.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 21.8
69735168 Antisense, RP_050503_02_C01, Mouse strain C57BL/6J (56 days, male) 21.8
Pons
Expression energy: 20.9
69735168 Antisense, RP_050503_02_C01, Mouse strain C57BL/6J (56 days, male) 20.9

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