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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:243.5 nTPM
HPA Brain:847.9 nTPM
GTEx:243.5 nTPM
FANTOM5:459.1 Scaled Tags Per Million
Pig:212.4 nTPM
Mouse:0.2 nTPM
Allen mouse:14.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012107
Glial cells Medium
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

847.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 254.3
2288 Male, age 75, left hemisphere 367.7
2846 Female, age 79, unknown 283.4
1781 Male, age 74, unknown 265.2
2289 Male, age 61, right hemisphere 238.2
2290 Female, age 72, unknown 236.0
1854 Male, age 80, left hemisphere 233.5
2481 Female, age 94, left hemisphere 228.0
1857 Female, age 85, left hemisphere 182.2
Globus pallidus, externus
nTPM: 798.2
2646 Male, age 61, right hemisphere 988.4
1996 Male, age 80, right hemisphere 938.0
2772 Female, age 79, unknown 791.5
2567 Female, age 72, unknown 695.3
2395 Male, age 75, both hemispheres 577.8
Globus pallidus, internus
nTPM: 847.9
2111 Female, age 85, right hemisphere 1449.1
2778 Female, age 91, both hemispheres 1034.2
2287 Male, age 75, right hemisphere 809.9
2566 Female, age 72, unknown 733.7
2037 Male, age 80, right hemisphere 730.7
1818 Male, age 74, unknown 691.2
2483 Female, age 94, right hemisphere 486.6
Nucleus accumbens
nTPM: 354.8
2391 Female, age 94, left hemisphere 486.3
2732 Male, age 80, right hemisphere 481.3
2698 Female, age 72, unknown 474.8
2286 Male, age 75, left hemisphere 349.3
1806 Female, age 85, left hemisphere 316.8
2824 Male, age 61, right hemisphere 270.7
1783 Male, age 74, unknown 267.7
1856 Female, age 91, right hemisphere 192.0
Nucleus basalis of Meynert
nTPM: 539.7
2569 Male, age 61, both hemispheres 1007.2
2821 Male, age 75, both hemispheres 479.1
2393 Male, age 80, right hemisphere 349.5
2484 Female, age 94, left hemisphere 322.8
Nucleus of the diagonal band
nTPM: 264.2
1812 Female, age 91, both hemispheres 356.4
2775 Male, age 80, right hemisphere 285.1
1979 Male, age 74, unknown 238.6
2029 Male, age 61, right hemisphere 236.9
2195 Female, age 85, both hemispheres 204.2
Putamen
nTPM: 307.1
2647 Male, age 75, left hemisphere 485.4
1829 Male, age 74, unknown 391.7
2489 Female, age 72, unknown 319.9
2482 Female, age 94, left hemisphere 302.8
1937 Female, age 91, right hemisphere 284.8
2466 Female, age 79, unknown 244.6
1838 Male, age 80, right hemisphere 120.4
Septal nuclei
nTPM: 404.6
2394 Male, age 61, left hemisphere 831.7
2199 Male, age 80, right hemisphere 443.5
2059 Female, age 85, both hemispheres 364.0
2629 Female, age 94, right hemisphere 346.2
2031 Female, age 72, unknown 308.3
1960 Male, age 74, unknown 277.2
2009 Female, age 91, both hemispheres 261.2
Stria terminalis, bed nucleus
nTPM: 289.5
2201 Male, age 74, unknown 338.6
1974 Female, age 91, both hemispheres 296.8
2486 Female, age 94, both hemispheres 233.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

243.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 169.0
Samples: 246

Max nTPM: 583.5
Min nTPM: 55.1
Std nTPM: 78.6
Median nTPM: 148.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 583.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 403.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 379.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 371.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 368.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 364.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 360.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 359.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 356.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 339.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 338.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 338.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 332.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 331.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 326.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 311.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 301.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 300.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 293.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 286.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 286.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 282.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 278.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 276.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 275.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 274.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 271.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 270.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 264.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 256.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 255.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 251.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 251.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 251.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 249.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 249.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 248.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 247.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 247.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 247.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 246.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 245.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 241.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 240.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 240.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 239.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 230.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 230.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 227.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 227.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 226.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 225.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 219.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 215.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 215.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 214.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 213.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 212.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 210.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 209.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 208.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 208.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 203.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 203.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 202.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 201.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 201.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 201.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 200.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 200.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 200.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 199.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 198.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 196.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 195.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 193.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 193.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 192.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 190.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 190.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 189.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 189.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 186.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 186.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 186.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 186.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 185.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 185.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 184.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 184.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 182.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 181.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 178.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 177.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 176.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 174.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 173.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 173.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 170.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 164.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 164.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 164.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 163.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 162.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 159.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 158.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 157.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 157.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 157.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 156.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 156.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 156.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 155.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 155.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 153.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 153.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 152.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 152.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 151.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 151.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 150.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 149.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 148.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 147.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 147.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 145.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 145.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 145.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 144.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 144.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 144.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 144.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 143.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 143.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 143.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 142.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 142.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 142.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 141.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 141.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 141.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 140.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 140.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 140.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 139.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 138.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 138.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 137.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 137.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 137.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 135.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 134.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 134.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 134.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 133.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 133.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 133.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 132.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 130.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 130.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 130.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 129.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 129.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 129.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 128.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 126.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 125.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 125.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 124.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 123.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 122.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 122.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 122.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 122.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 121.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 120.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 120.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 119.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 118.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 115.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 115.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 114.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 113.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 110.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 110.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 109.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 108.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 106.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 106.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 106.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 105.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 104.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 103.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 103.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 102.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 102.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 102.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 102.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 102.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 101.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 99.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 97.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 97.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 97.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 96.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 96.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 95.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 95.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 95.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 94.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 93.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 92.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 91.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 91.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 89.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 88.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 87.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 85.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 85.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 84.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 82.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 81.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 80.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 80.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 79.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 79.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 77.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 77.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 76.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 75.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 75.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 74.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 72.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 71.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 71.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 71.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 70.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 69.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 68.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 68.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 65.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 64.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 63.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 55.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 55.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 169.3
Samples: 246

Max nTPM: 947.5
Min nTPM: 35.0
Std nTPM: 118.7
Median nTPM: 135.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 947.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 660.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 641.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 605.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 568.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 548.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 505.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 496.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 487.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 477.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 391.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 389.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 387.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 387.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 357.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 351.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 341.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 340.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 338.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 322.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 311.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 306.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 301.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 294.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 293.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 290.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 289.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 286.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 281.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 281.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 279.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 275.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 274.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 269.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 259.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 254.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 249.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 247.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 245.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 243.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 242.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 237.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 236.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 236.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 234.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 232.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 229.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 227.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 220.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 220.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 219.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 218.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 217.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 217.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 215.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 212.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 212.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 209.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 207.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 206.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 205.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 205.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 204.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 203.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 201.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 200.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 200.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 199.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 199.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 195.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 194.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 194.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 194.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 191.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 191.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 188.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 187.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 186.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 184.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 182.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 182.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 182.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 182.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 178.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 175.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 173.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 172.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 166.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 166.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 165.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 162.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 161.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 161.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 160.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 160.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 160.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 160.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 159.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 155.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 155.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 155.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 154.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 153.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 153.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 152.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 150.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 150.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 149.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 148.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 148.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 147.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 146.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 144.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 143.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 142.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 142.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 141.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 141.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 138.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 137.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 137.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 136.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 136.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 135.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 134.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 132.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 131.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 131.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 130.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 130.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 130.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 130.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 129.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 128.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 128.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 127.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 127.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 127.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 125.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 124.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 124.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 123.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 123.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 123.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 122.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 122.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 122.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 119.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 118.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 117.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 116.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 116.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 116.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 113.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 111.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 111.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 111.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 110.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 110.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 109.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 108.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 107.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 107.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 106.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 105.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 104.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 104.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 103.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 102.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 101.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 100.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 100.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 99.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 99.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 99.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 99.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 99.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 98.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 98.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 97.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 97.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 96.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 96.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 95.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 94.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 94.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 94.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 93.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 93.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 93.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 93.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 92.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 92.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 91.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 91.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 90.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 90.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 89.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 89.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 88.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 87.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 84.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 83.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 83.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 82.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 81.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 80.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 79.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 79.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 78.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 77.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 77.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 76.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 75.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 73.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 73.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 72.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 71.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 71.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 70.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 70.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 70.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 70.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 68.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 67.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 66.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 66.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 65.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 65.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 60.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 60.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 59.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 59.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 59.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 56.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 55.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 55.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 54.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 51.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 50.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 44.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 43.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 42.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 41.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 35.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 35.0
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Brain - Putamen (basal ganglia)
Average nTPM: 243.5
Samples: 205

Max nTPM: 958.0
Min nTPM: 79.9
Std nTPM: 119.3
Median nTPM: 226.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 958.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 781.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 749.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 608.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 604.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 435.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 427.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 425.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 425.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 422.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 421.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 415.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 413.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 413.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 412.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 404.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 394.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 391.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 388.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 386.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 386.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 375.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 372.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 358.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 355.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 352.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 349.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 349.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 347.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 344.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 340.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 339.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 338.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 334.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 333.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 331.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 328.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 327.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 326.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 322.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 321.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 317.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 313.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 309.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 308.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 307.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 304.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 304.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 303.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 302.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 298.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 296.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 296.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 292.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 291.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 291.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 291.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 290.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 286.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 278.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 275.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 275.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 275.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 274.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 271.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 269.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 268.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 267.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 264.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 262.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 260.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 259.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 258.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 258.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 257.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 256.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 255.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 254.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 254.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 254.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 253.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 252.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 248.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 246.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 246.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 246.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 245.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 244.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 241.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 240.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 240.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 239.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 239.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 236.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 233.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 233.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 233.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 231.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 229.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 228.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 228.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 226.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 226.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 225.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 224.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 224.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 220.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 220.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 220.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 218.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 217.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 216.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 214.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 211.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 211.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 209.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 207.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 207.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 206.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 206.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 205.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 205.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 205.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 202.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 200.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 199.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 197.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 197.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 196.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 194.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 193.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 192.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 192.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 191.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 190.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 189.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 189.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 189.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 188.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 187.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 187.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 186.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 181.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 178.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 177.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 176.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 175.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 173.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 173.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 172.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 172.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 170.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 166.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 166.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 161.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 159.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 156.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 155.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 153.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 149.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 149.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 148.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 147.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 145.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 144.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 143.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 143.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 143.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 142.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 139.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 138.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 138.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 137.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 135.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 132.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 128.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 128.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 127.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 126.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 124.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 124.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 122.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 122.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 121.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 120.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 120.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 120.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 116.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 111.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 108.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 107.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 104.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 103.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 103.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 102.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 102.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 101.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 98.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 97.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 95.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 91.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 85.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 82.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 80.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 79.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

459.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 81.4
FF:10164-103B2 76 years, female 81.4
Nucleus accumbens
Scaled Tags Per Million: 266.4
FF:10037-101F1 23-56 years, mixed 266.4
Putamen
Scaled Tags Per Million: 143.3
FF:10176-103C5 60 years, female 143.3
Globus pallidus
Scaled Tags Per Million: 459.1
FF:10175-103C4 60 years, female 522.6
FF:10161-103A8 76 years, female 395.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

212.4
Pig sample Sample description nTPM
Caudate
nTPM: 129.5
Samples: 4

Max nTPM: 142.8
Min nTPM: 103.4
Sample A Female 103.4
Sample B Female 142.8
Sample C Male 142.8
Sample D Male 128.9
Putamen
nTPM: 212.4
Samples: 4

Max nTPM: 238.3
Min nTPM: 144.2
Sample A Female 238.3
Sample B Female 144.2
Sample C Male 230.1
Sample D Male 236.8
Septum
nTPM: 200.2
Samples: 4

Max nTPM: 238.2
Min nTPM: 150.3
Sample A Female 150.3
Sample B Female 187.5
Sample C Male 238.2
Sample D Male 224.9
Ventral pallidum
nTPM: 211.8
Samples: 4

Max nTPM: 297.4
Min nTPM: 123.5
Sample A Female 123.5
Sample B Female 186.4
Sample C Male 297.4
Sample D Male 239.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 931.4
Samples: 4

Max nTPM: 962.2
Min nTPM: 896.4
Sample A Male 936.2
Sample B Male 930.8
Sample C Female 896.4
Sample D Female 962.2
Septum
nTPM: 1020.2
Samples: 4

Max nTPM: 1079.0
Min nTPM: 854.1
Sample A Male 854.1
Sample B Male 1071.5
Sample C Female 1079.0
Sample D Female 1076.0
Ventral forebrain
nTPM: 773.6
Samples: 4

Max nTPM: 857.3
Min nTPM: 697.6
Sample A Male 697.6
Sample B Male 817.6
Sample C Female 857.3
Sample D Female 721.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.7
74819250 Antisense, RP_060315_02_D02, Mouse strain C57BL/6J (56 days, male) 12.1
68633119 Antisense, RP_050125_02_D10, Mouse strain C57BL/6J (56 days, male) 11.3
75863344 Antisense, RP_060601_03_C07, Mouse strain C57BL/6J (56 days, male) 0.2
Striatum
Expression energy: 11.7
74819250 Antisense, RP_060315_02_D02, Mouse strain C57BL/6J (56 days, male) 12.1
68633119 Antisense, RP_050125_02_D10, Mouse strain C57BL/6J (56 days, male) 11.3
75863344 Antisense, RP_060601_03_C07, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 14.7
74819250 Antisense, RP_060315_02_D02, Mouse strain C57BL/6J (56 days, male) 16.0
68633119 Antisense, RP_050125_02_D10, Mouse strain C57BL/6J (56 days, male) 13.3
75863344 Antisense, RP_060601_03_C07, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 14.7
74819250 Antisense, RP_060315_02_D02, Mouse strain C57BL/6J (56 days, male) 16.0
68633119 Antisense, RP_050125_02_D10, Mouse strain C57BL/6J (56 days, male) 13.3
75863344 Antisense, RP_060601_03_C07, Mouse strain C57BL/6J (56 days, male) 0.1

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