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  • RPL3
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1349.9 nTPM
HPA Brain:806.8 nTPM
GTEx:1349.9 nTPM
FANTOM5:86.7 Scaled Tags Per Million
Pig:371.5 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

806.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 633.0
2565 Male, age 75, midline 732.6
1981 Female, age 72, midline 697.6
2194 Female, age 79, both hemispheres 642.6
2816 Male, age 47, midline 557.0
2048 Male, age 55, midline 535.0
Cervical spinal cord, dorsal horn
nTPM: 550.2
2173 Female, age 72, unknown 752.6
2296 Male, age 66, both hemispheres 612.2
2069 Male, age 47, both hemispheres 610.5
1877 Male, age 55, unknown 541.0
2721 Male, age 90, both hemispheres 417.1
2297 Male, age 75, both hemispheres 367.8
Cervical spinal cord, ventral horn
nTPM: 806.8
2480 Male, age 75, both hemispheres 1081.1
2809 Male, age 90, both hemispheres 1015.7
2098 Female, age 72, unknown 795.6
2295 Male, age 66, both hemispheres 772.9
2068 Male, age 55, unknown 655.9
2820 Female, age 79, both hemispheres 519.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1349.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1349.9
Samples: 159

Max nTPM: 2409.2
Min nTPM: 619.2
Std nTPM: 350.5
Median nTPM: 1301.7
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2409.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2263.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2260.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2161.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2090.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2040.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2027.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1980.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1973.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1956.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1951.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1948.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1937.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1914.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1898.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1841.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1810.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1809.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1808.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1791.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1788.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1782.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1776.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1773.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1764.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1732.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1726.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1725.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1714.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1684.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1660.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1653.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1644.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1615.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1606.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1593.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1589.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1587.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1553.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1550.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1537.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1536.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1533.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1530.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1505.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1493.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1486.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1486.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1484.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1476.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1474.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1466.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1447.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1446.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1443.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1442.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1417.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1416.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1416.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1411.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1408.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1403.4
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1400.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1398.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1392.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1375.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1375.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1375.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1372.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1350.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1345.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1341.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1320.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1319.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1310.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1309.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1309.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1307.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1302.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1301.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1298.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1288.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1284.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1283.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1282.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1279.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1276.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1273.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1260.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1255.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1254.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1254.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1253.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1249.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1240.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1237.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1226.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1224.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1214.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1206.5
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1206.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1195.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1193.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1187.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1174.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1162.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1141.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1137.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1132.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1132.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1132.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1131.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1129.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1128.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1122.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1114.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1093.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1090.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1089.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1088.7
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1087.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1068.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1067.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1062.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1060.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1057.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1055.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1048.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1045.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1040.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1035.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1031.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1025.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1025.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1017.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1013.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1010.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1007.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1007.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1001.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 986.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 953.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 947.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 924.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 920.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 908.9
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 905.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 902.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 891.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 889.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 835.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 835.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 832.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 827.9
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 774.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 748.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 700.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 658.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 619.2
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

86.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 86.7
FF:10159-103A6 76 years, female 91.0
FF:10181-103D1 60 years, female 82.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

371.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 371.5
Samples: 4

Max nTPM: 543.7
Min nTPM: 248.8
Sample A Female 248.8
Sample B Female 403.1
Sample C Male 543.7
Sample D Male 290.3
Ventral spinal cord
nTPM: 345.9
Samples: 4

Max nTPM: 393.2
Min nTPM: 266.2
Sample A Female 266.2
Sample B Female 393.2
Sample C Male 393.0
Sample D Male 331.0

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