We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CLIP3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CLIP3
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:132.8 nTPM
HPA Brain:292.0 nTPM
GTEx:132.8 nTPM
FANTOM5:387.2 Scaled Tags Per Million
Pig:201.3 nTPM
Mouse:297.9 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA079430
Glial cells High
Neuronal cells Not detected

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

292.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 199.6
2846 Female, age 79, unknown 241.4
1781 Male, age 74, unknown 239.0
2290 Female, age 72, unknown 220.1
1857 Female, age 85, left hemisphere 206.4
2288 Male, age 75, left hemisphere 187.5
2481 Female, age 94, left hemisphere 171.5
1854 Male, age 80, left hemisphere 171.0
2289 Male, age 61, right hemisphere 159.8
Globus pallidus, externus
nTPM: 174.7
2646 Male, age 61, right hemisphere 248.1
2772 Female, age 79, unknown 169.7
2395 Male, age 75, both hemispheres 166.5
1996 Male, age 80, right hemisphere 153.8
2567 Female, age 72, unknown 135.2
Globus pallidus, internus
nTPM: 169.3
2287 Male, age 75, right hemisphere 217.0
2566 Female, age 72, unknown 180.8
1818 Male, age 74, unknown 176.1
2483 Female, age 94, right hemisphere 172.2
2778 Female, age 91, both hemispheres 157.2
2037 Male, age 80, right hemisphere 149.2
2111 Female, age 85, right hemisphere 132.6
Nucleus accumbens
nTPM: 207.8
1856 Female, age 91, right hemisphere 283.1
2698 Female, age 72, unknown 275.2
1783 Male, age 74, unknown 251.0
2286 Male, age 75, left hemisphere 191.5
1806 Female, age 85, left hemisphere 191.1
2824 Male, age 61, right hemisphere 177.3
2391 Female, age 94, left hemisphere 147.1
2732 Male, age 80, right hemisphere 146.1
Nucleus basalis of Meynert
nTPM: 192.6
2569 Male, age 61, both hemispheres 251.2
2821 Male, age 75, both hemispheres 204.9
2393 Male, age 80, right hemisphere 162.2
2484 Female, age 94, left hemisphere 151.9
Nucleus of the diagonal band
nTPM: 292.0
2195 Female, age 85, both hemispheres 337.1
2775 Male, age 80, right hemisphere 323.4
1812 Female, age 91, both hemispheres 308.5
2029 Male, age 61, right hemisphere 257.8
1979 Male, age 74, unknown 233.0
Putamen
nTPM: 192.0
2647 Male, age 75, left hemisphere 219.7
1937 Female, age 91, right hemisphere 218.7
1838 Male, age 80, right hemisphere 205.9
1829 Male, age 74, unknown 199.7
2466 Female, age 79, unknown 175.4
2482 Female, age 94, left hemisphere 167.9
2489 Female, age 72, unknown 156.9
Septal nuclei
nTPM: 267.8
2629 Female, age 94, right hemisphere 345.8
1960 Male, age 74, unknown 326.1
2031 Female, age 72, unknown 304.8
2009 Female, age 91, both hemispheres 251.5
2059 Female, age 85, both hemispheres 226.9
2394 Male, age 61, left hemisphere 215.8
2199 Male, age 80, right hemisphere 203.8
Stria terminalis, bed nucleus
nTPM: 278.1
1974 Female, age 91, both hemispheres 299.8
2201 Male, age 74, unknown 283.8
2486 Female, age 94, both hemispheres 250.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 115.1
Samples: 246

Max nTPM: 230.6
Min nTPM: 55.4
Std nTPM: 30.7
Median nTPM: 114.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 230.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 193.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 185.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 180.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 180.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 176.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 175.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 175.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 174.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 174.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 172.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 171.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 170.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 170.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 165.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 165.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 164.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 163.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 163.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 163.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 163.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 161.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 161.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 160.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 160.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 157.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 156.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 156.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 156.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 153.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 152.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 149.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 148.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 148.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 148.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 147.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 146.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 146.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 145.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 145.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 143.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 143.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 142.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 142.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 141.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 141.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 141.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 141.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 140.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 140.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 139.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 139.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 139.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 138.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 138.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 137.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 137.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 136.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 136.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 135.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 134.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 134.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 134.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 134.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 133.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 133.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 133.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 132.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 132.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 132.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 131.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 131.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 131.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 131.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 131.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 130.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 130.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 130.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 130.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 129.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 128.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 128.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 127.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 127.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 127.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 126.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 126.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 126.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 125.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 125.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 125.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 125.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 125.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 125.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 124.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 123.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 123.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 123.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 123.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 122.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 121.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 119.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 119.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 119.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 118.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 118.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 117.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 117.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 117.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 117.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 116.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 116.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 116.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 116.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 115.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 115.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 115.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 115.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 114.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 114.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 114.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 114.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 114.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 114.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 114.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 114.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 114.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 113.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 113.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 112.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 111.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 111.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 110.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 110.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 110.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 109.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 108.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 108.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 108.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 107.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 107.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 107.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 107.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 107.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 106.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 106.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 106.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 106.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 106.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 105.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 105.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 103.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 103.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 102.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 102.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 101.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 101.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 101.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 100.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 100.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 99.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 99.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 99.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 98.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 98.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 97.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 97.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 97.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 96.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 95.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 95.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 95.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 94.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 93.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 93.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 93.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 93.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 92.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 91.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 90.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 89.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 88.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 88.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 88.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 87.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 87.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 87.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 86.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 86.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 86.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 85.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 85.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 84.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 84.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 84.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 84.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 84.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 83.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 83.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 83.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 83.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 82.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 82.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 81.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 81.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 81.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 81.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 81.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 81.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 81.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 81.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 80.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 78.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 78.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 78.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 78.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 77.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 77.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 77.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 77.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 77.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 76.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 75.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 75.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 75.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 74.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 73.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 73.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 72.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 70.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 69.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 68.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 68.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 67.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 67.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 67.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 66.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 66.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 64.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 64.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 63.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 57.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 55.4
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 132.8
Samples: 246

Max nTPM: 237.4
Min nTPM: 44.7
Std nTPM: 35.3
Median nTPM: 137.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 237.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 228.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 219.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 215.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 212.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 206.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 204.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 200.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 195.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 195.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 194.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 193.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 186.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 186.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 185.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 185.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 182.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 180.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 179.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 178.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 178.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 177.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 176.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 174.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 174.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 173.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 172.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 171.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 171.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 171.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 169.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 168.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 168.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 167.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 167.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 167.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 166.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 165.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 164.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 164.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 164.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 163.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 162.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 161.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 161.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 161.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 161.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 161.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 160.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 160.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 160.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 160.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 160.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 159.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 159.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 159.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 159.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 158.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 157.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 157.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 157.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 156.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 155.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 155.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 154.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 154.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 154.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 154.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 154.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 153.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 153.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 153.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 152.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 152.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 152.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 152.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 152.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 151.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 151.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 150.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 150.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 150.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 150.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 150.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 149.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 149.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 149.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 149.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 148.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 148.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 147.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 146.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 146.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 146.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 145.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 145.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 145.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 144.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 144.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 144.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 144.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 144.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 144.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 143.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 143.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 143.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 143.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 143.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 142.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 141.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 140.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 140.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 140.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 140.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 140.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 140.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 140.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 139.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 139.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 139.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 138.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 138.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 138.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 136.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 136.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 135.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 135.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 134.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 134.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 134.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 133.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 133.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 133.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 133.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 132.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 132.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 131.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 130.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 130.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 130.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 129.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 129.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 128.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 127.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 126.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 126.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 125.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 125.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 124.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 123.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 122.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 122.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 122.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 120.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 120.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 120.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 120.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 120.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 119.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 118.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 118.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 117.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 117.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 116.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 116.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 115.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 115.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 114.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 114.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 113.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 113.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 112.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 112.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 111.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 111.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 111.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 111.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 110.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 110.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 108.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 107.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 106.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 106.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 106.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 106.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 105.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 104.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 104.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 104.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 102.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 102.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 101.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 101.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 99.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 99.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 98.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 98.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 97.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 97.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 97.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 96.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 96.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 95.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 95.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 95.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 94.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 94.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 94.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 94.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 94.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 93.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 93.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 93.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 92.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 92.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 92.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 92.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 89.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 89.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 88.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 86.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 84.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 82.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 82.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 82.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 81.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 81.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 80.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 79.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 78.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 77.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 75.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 73.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 73.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 70.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 70.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 69.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 69.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 68.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 64.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 64.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 63.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 59.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 58.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 55.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 44.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 114.3
Samples: 205

Max nTPM: 204.7
Min nTPM: 41.7
Std nTPM: 30.5
Median nTPM: 115.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 204.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 189.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 177.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 175.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 173.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 168.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 168.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 166.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 165.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 164.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 164.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 164.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 163.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 162.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 156.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 156.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 156.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 155.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 154.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 154.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 153.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 153.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 152.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 152.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 151.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 150.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 150.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 149.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 148.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 148.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 147.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 146.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 146.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 146.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 145.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 145.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 145.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 144.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 144.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 144.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 144.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 140.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 140.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 140.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 139.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 138.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 138.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 138.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 138.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 137.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 137.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 136.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 136.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 136.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 135.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 135.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 135.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 134.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 133.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 133.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 133.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 132.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 132.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 131.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 131.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 131.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 130.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 129.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 129.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 129.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 129.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 127.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 127.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 127.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 127.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 127.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 127.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 126.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 125.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 125.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 125.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 125.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 124.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 123.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 121.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 121.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 121.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 120.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 120.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 120.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 120.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 120.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 119.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 119.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 119.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 118.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 117.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 117.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 117.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 116.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 116.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 115.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 115.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 113.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 113.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 113.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 113.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 113.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 113.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 111.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 110.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 110.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 109.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 108.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 107.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 106.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 105.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 105.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 105.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 105.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 105.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 105.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 105.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 104.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 104.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 103.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 103.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 102.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 102.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 102.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 101.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 100.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 100.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 99.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 98.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 98.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 97.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 97.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 97.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 97.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 96.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 96.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 96.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 96.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 96.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 95.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 95.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 93.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 91.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 91.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 90.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 90.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 90.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 89.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 89.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 89.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 88.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 87.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 87.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 84.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 84.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 84.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 84.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 83.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 83.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 82.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 82.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 81.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 81.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 81.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 81.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 80.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 80.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 79.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 79.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 79.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 77.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 77.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 77.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 76.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 76.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 75.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 75.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 75.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 75.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 74.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 73.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 72.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 72.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 72.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 72.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 71.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 70.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 66.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 66.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 64.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 62.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 61.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 61.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 60.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 59.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 57.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 54.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 41.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

387.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 355.2
FF:10164-103B2 76 years, female 355.2
Nucleus accumbens
Scaled Tags Per Million: 375.0
FF:10037-101F1 23-56 years, mixed 375.0
Putamen
Scaled Tags Per Million: 387.2
FF:10176-103C5 60 years, female 387.2
Globus pallidus
Scaled Tags Per Million: 144.9
FF:10161-103A8 76 years, female 163.6
FF:10175-103C4 60 years, female 126.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

201.3
Pig sample Sample description nTPM
Caudate
nTPM: 201.3
Samples: 4

Max nTPM: 250.8
Min nTPM: 166.2
Sample A Female 166.2
Sample B Female 203.8
Sample C Male 250.8
Sample D Male 184.4
Putamen
nTPM: 199.9
Samples: 4

Max nTPM: 232.3
Min nTPM: 156.5
Sample A Female 156.5
Sample B Female 180.6
Sample C Male 230.2
Sample D Male 232.3
Septum
nTPM: 170.0
Samples: 4

Max nTPM: 198.8
Min nTPM: 147.1
Sample A Female 168.0
Sample B Female 165.9
Sample C Male 198.8
Sample D Male 147.1
Ventral pallidum
nTPM: 194.2
Samples: 4

Max nTPM: 240.2
Min nTPM: 170.5
Sample A Female 186.8
Sample B Female 170.5
Sample C Male 240.2
Sample D Male 179.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

297.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 258.5
Samples: 4

Max nTPM: 276.6
Min nTPM: 244.6
Sample A Male 244.6
Sample B Male 249.7
Sample C Female 263.1
Sample D Female 276.6
Septum
nTPM: 297.9
Samples: 4

Max nTPM: 327.5
Min nTPM: 270.2
Sample A Male 327.5
Sample B Male 270.2
Sample C Female 299.6
Sample D Female 294.4
Ventral forebrain
nTPM: 284.9
Samples: 4

Max nTPM: 292.2
Min nTPM: 274.1
Sample A Male 274.1
Sample B Male 292.2
Sample C Female 282.7
Sample D Female 290.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org