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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
570.0
nTPM
FANTOM5:
21.7
Scaled Tags Per Million
Pig:
689.5
nTPM
Allen mouse:
3.6
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
570.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 514.9
2090
Male, age 80, both hemispheres
629.7
2188
Female, age 91, both hemispheres
543.7
2301
Female, age 85, both hemispheres
449.4
1984
Male, age 76, both hemispheres
436.8
Dorsal cochlear nucleus nTPM: 556.9
2802
Male, age 74, right hemisphere
615.2
2378
Male, age 80, both hemispheres
610.0
2370
Male, age 61, both hemispheres
551.8
2187
Female, age 91, both hemispheres
518.9
2058
Male, age 76, both hemispheres
488.8
Dorsal tegmental nucleus nTPM: 539.5
2358
Male, age 61, both hemispheres
590.7
2326
Male, age 74, both hemispheres
566.6
2083
Male, age 80, both hemispheres
507.7
1936
Male, age 76, left hemisphere
493.0
Dorsolateral tegmental area nTPM: 523.0
2337
Male, age 61, both hemispheres
766.9
2654
Male, age 80, both hemispheres
563.3
2360
Male, age 74, both hemispheres
468.9
2751
Female, age 85, both hemispheres
424.2
2141
Male, age 76, both hemispheres
391.6
Kolliker-Fuse nucleus nTPM: 528.1
2315
Male, age 76, right hemisphere
647.7
2793
Female, age 91, left hemisphere
474.2
2163
Male, age 80, both hemispheres
462.5
Lateral lemniscal nuclei nTPM: 372.6
2746
Female, age 85, left hemisphere
429.9
2320
Female, age 91, left hemisphere
412.9
2453
Male, age 74, right hemisphere
402.2
2169
Male, age 76, both hemispheres
344.2
2036
Male, age 80, both hemispheres
274.0
Lateral parabrachial nucleus nTPM: 570.0
2792
Male, age 76, both hemispheres
646.6
2013
Male, age 80, both hemispheres
602.0
2790
Male, age 61, both hemispheres
568.1
2139
Female, age 85, right hemisphere
463.4
Lateral vestibular nucleus nTPM: 498.7
2311
Male, age 80, both hemispheres
601.3
2184
Male, age 76, both hemispheres
396.0
Locus coeruleus nTPM: 415.8
2123
Female, age 91, both hemispheres
479.6
2162
Male, age 80, both hemispheres
457.6
2720
Male, age 74, both hemispheres
431.7
2317
Female, age 72, unknown
418.8
2014
Male, age 55, unknown
406.7
1980
Male, age 76, both hemispheres
390.1
2788
Male, age 74, unknown
326.5
Medial parabrachial nucleus nTPM: 469.5
2170
Female, age 91, both hemispheres
509.5
2156
Male, age 61, both hemispheres
473.6
2854
Male, age 80, both hemispheres
461.2
2786
Male, age 76, both hemispheres
453.1
2463
Female, age 85, right hemisphere
450.3
Medial periolivary nuclei nTPM: 447.4
2081
Male, age 80, both hemispheres
576.0
2063
Male, age 76, both hemispheres
473.3
2458
Female, age 91, both hemispheres
445.7
2791
Male, age 74, right hemisphere
407.7
2171
Female, age 85, both hemispheres
334.1
Motor facial nucleus nTPM: 412.2
2795
Female, age 91, both hemispheres
462.2
2126
Male, age 61, both hemispheres
454.5
2062
Male, age 76, both hemispheres
450.9
2365
Male, age 74, right hemisphere
426.1
2697
Female, age 85, both hemispheres
377.3
2327
Male, age 80, both hemispheres
302.6
Motor trigeminal nucleus nTPM: 471.8
2335
Male, age 61, both hemispheres
529.9
2560
Male, age 74, both hemispheres
510.9
2321
Female, age 91, both hemispheres
481.7
2309
Male, age 76, both hemispheres
437.0
2079
Male, age 80, both hemispheres
399.5
Nuclei of the trapezoid body nTPM: 419.2
1983
Male, age 76, both hemispheres
534.7
2166
Male, age 80, both hemispheres
456.7
2368
Female, age 91, both hemispheres
411.9
2735
Female, age 85, both hemispheres
373.5
2159
Male, age 61, both hemispheres
319.4
Nucleus raphe magnus nTPM: 394.3
2051
Male, age 76, both hemispheres
524.1
2459
Female, age 91, both hemispheres
440.5
2328
Male, age 80, both hemispheres
365.4
2455
Male, age 74, both hemispheres
365.3
2172
Female, age 85, both hemispheres
361.5
2160
Male, age 61, both hemispheres
309.3
Paramedian reticular nucleus nTPM: 461.4
2052
Male, age 76, both hemispheres
516.8
2057
Male, age 80, both hemispheres
472.2
2050
Female, age 85, both hemispheres
428.8
2313
Male, age 61, both hemispheres
427.6
Pedunculopontine tegmental nucleus nTPM: 476.0
2338
Male, age 61, both hemispheres
607.3
2334
Male, age 80, both hemispheres
472.8
1921
Female, age 85, both hemispheres
347.7
Pontine nuclei nTPM: 440.0
2115
Male, age 80, left hemisphere
536.6
2319
Female, age 91, both hemispheres
488.8
1968
Male, age 76, left hemisphere
461.0
2109
Female, age 72, unknown
452.7
1863
Male, age 55, unknown
448.0
2787
Female, age 85, both hemispheres
413.8
2454
Male, age 74, left hemisphere
395.5
2727
Male, age 61, right hemisphere
323.5
Pontine raphe nucleus nTPM: 415.4
2853
Male, age 76, midline
419.4
2122
Female, age 85, midline
411.3
Posteroventral cochlear nucleus nTPM: 555.8
2341
Male, age 80, both hemispheres
613.9
2371
Male, age 61, both hemispheres
608.4
2135
Female, age 91, both hemispheres
589.3
2070
Male, age 76, both hemispheres
501.3
2752
Female, age 85, both hemispheres
466.3
Principal sensory trigeminal nucleus nTPM: 390.2
2367
Female, age 91, left hemisphere
413.8
2324
Male, age 76, both hemispheres
395.7
2158
Male, age 61, both hemispheres
385.5
2008
Male, age 80, left hemisphere
366.0
Reticular pontine nucleus, caudal nTPM: 450.5
2457
Female, age 91, both hemispheres
495.1
2559
Male, age 74, both hemispheres
493.7
2092
Male, age 76, both hemispheres
464.8
2332
Male, age 80, right hemisphere
348.3
Reticular pontine nucleus, oral nTPM: 430.7
2366
Female, age 91, both hemispheres
458.6
1939
Male, age 80, both hemispheres
443.7
2167
Male, age 76, both hemispheres
437.0
2361
Male, age 74, both hemispheres
428.3
2012
Female, age 85, both hemispheres
385.7
Reticulotegmental nucleus nTPM: 445.5
2452
Male, age 74, both hemispheres
552.4
2333
Male, age 80, both hemispheres
447.8
2322
Female, age 91, both hemispheres
417.4
2325
Male, age 76, both hemispheres
364.3
Spinal trigeminal nucleus, oral nTPM: 435.2
2164
Male, age 80, both hemispheres
477.7
1978
Male, age 76, both hemispheres
450.5
2737
Female, age 85, both hemispheres
377.5
Subcoeruleus area nTPM: 451.8
2451
Male, age 74, both hemispheres
620.1
2369
Female, age 85, left hemisphere
457.3
1958
Male, age 80, both hemispheres
415.8
2089
Male, age 76, left hemisphere
396.0
2323
Female, age 91, left hemisphere
369.7
Superior olive nTPM: 420.5
2020
Male, age 76, both hemispheres
514.5
2561
Female, age 91, both hemispheres
469.7
2364
Male, age 74, right hemisphere
407.8
1875
Female, age 85, both hemispheres
356.6
2329
Male, age 80, right hemisphere
353.9
Ventral periolivary nuclei nTPM: 414.5
2023
Male, age 76, both hemispheres
498.5
2794
Female, age 91, left hemisphere
440.2
2165
Male, age 80, both hemispheres
402.6
2130
Female, age 85, both hemispheres
316.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 445.2
2161
Male, age 80, both hemispheres
535.6
2359
Male, age 61, both hemispheres
494.9
1959
Male, age 76, both hemispheres
436.8
2456
Female, age 91, both hemispheres
433.1
2449
Male, age 74, both hemispheres
416.7
2840
Female, age 85, both hemispheres
354.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
689.5
Pig sample
Sample description
nTPM
Pons nTPM: 689.5
Samples: 4
Max nTPM: 852.8
Min nTPM: 528.1
Sample A
Female
638.6
Sample B
Female
528.1
Sample C
Male
852.8
Sample D
Male
738.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
