We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
EDF1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • EDF1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:404.0 nTPM
HPA Brain:170.1 nTPM
GTEx:404.0 nTPM
FANTOM5:442.9 Scaled Tags Per Million
Pig:88.1 nTPM
Mouse:189.5 nTPM
Allen mouse:4.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035642
Glial cells Low
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 159.2
1781 Male, age 74, unknown 179.4
2846 Female, age 79, unknown 174.5
2481 Female, age 94, left hemisphere 164.4
2290 Female, age 72, unknown 162.6
1854 Male, age 80, left hemisphere 158.1
1857 Female, age 85, left hemisphere 157.9
2288 Male, age 75, left hemisphere 152.3
2289 Male, age 61, right hemisphere 124.1
Globus pallidus, externus
nTPM: 158.6
2646 Male, age 61, right hemisphere 177.0
2772 Female, age 79, unknown 175.2
1996 Male, age 80, right hemisphere 170.7
2395 Male, age 75, both hemispheres 144.4
2567 Female, age 72, unknown 125.7
Globus pallidus, internus
nTPM: 164.1
2287 Male, age 75, right hemisphere 203.2
2483 Female, age 94, right hemisphere 164.7
2778 Female, age 91, both hemispheres 163.9
2037 Male, age 80, right hemisphere 163.3
1818 Male, age 74, unknown 163.0
2566 Female, age 72, unknown 151.5
2111 Female, age 85, right hemisphere 138.9
Nucleus accumbens
nTPM: 165.6
2698 Female, age 72, unknown 205.0
1856 Female, age 91, right hemisphere 189.9
1783 Male, age 74, unknown 171.8
2391 Female, age 94, left hemisphere 170.8
2286 Male, age 75, left hemisphere 165.0
1806 Female, age 85, left hemisphere 157.9
2824 Male, age 61, right hemisphere 134.8
2732 Male, age 80, right hemisphere 129.5
Nucleus basalis of Meynert
nTPM: 161.7
2821 Male, age 75, both hemispheres 211.0
2569 Male, age 61, both hemispheres 155.6
2484 Female, age 94, left hemisphere 143.5
2393 Male, age 80, right hemisphere 136.8
Nucleus of the diagonal band
nTPM: 170.1
2775 Male, age 80, right hemisphere 183.3
1812 Female, age 91, both hemispheres 180.0
2195 Female, age 85, both hemispheres 176.9
1979 Male, age 74, unknown 159.6
2029 Male, age 61, right hemisphere 150.6
Putamen
nTPM: 152.1
2482 Female, age 94, left hemisphere 175.1
2647 Male, age 75, left hemisphere 169.6
1838 Male, age 80, right hemisphere 153.4
1937 Female, age 91, right hemisphere 148.9
1829 Male, age 74, unknown 144.4
2489 Female, age 72, unknown 137.0
2466 Female, age 79, unknown 136.0
Septal nuclei
nTPM: 158.9
2629 Female, age 94, right hemisphere 198.0
1960 Male, age 74, unknown 191.1
2031 Female, age 72, unknown 167.1
2059 Female, age 85, both hemispheres 151.3
2009 Female, age 91, both hemispheres 149.8
2199 Male, age 80, right hemisphere 144.8
2394 Male, age 61, left hemisphere 110.2
Stria terminalis, bed nucleus
nTPM: 156.2
1974 Female, age 91, both hemispheres 176.9
2201 Male, age 74, unknown 145.9
2486 Female, age 94, both hemispheres 145.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

404.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 361.2
Samples: 246

Max nTPM: 726.0
Min nTPM: 199.3
Std nTPM: 82.3
Median nTPM: 343.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 726.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 695.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 654.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 614.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 607.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 574.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 566.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 554.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 549.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 530.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 525.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 514.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 506.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 504.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 498.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 494.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 494.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 488.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 485.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 484.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 475.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 474.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 473.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 470.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 470.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 467.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 463.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 458.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 457.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 457.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 451.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 450.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 450.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 441.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 440.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 438.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 435.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 432.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 431.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 431.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 426.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 426.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 425.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 424.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 423.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 423.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 420.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 420.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 418.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 417.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 417.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 415.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 410.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 410.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 409.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 407.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 404.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 404.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 404.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 401.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 399.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 398.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 396.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 395.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 394.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 394.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 392.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 390.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 389.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 388.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 388.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 388.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 386.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 386.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 385.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 385.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 384.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 382.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 382.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 381.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 380.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 380.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 375.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 374.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 374.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 373.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 373.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 371.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 368.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 367.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 367.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 367.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 366.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 365.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 361.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 361.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 361.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 360.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 360.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 357.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 357.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 356.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 355.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 355.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 354.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 353.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 351.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 349.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 349.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 349.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 349.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 348.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 348.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 348.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 347.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 347.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 347.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 346.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 346.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 345.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 344.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 344.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 343.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 342.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 342.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 342.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 342.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 341.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 341.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 341.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 341.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 341.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 339.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 339.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 339.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 339.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 338.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 338.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 338.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 337.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 336.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 336.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 335.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 334.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 334.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 334.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 334.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 334.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 333.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 333.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 332.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 332.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 332.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 331.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 331.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 331.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 331.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 331.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 330.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 329.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 325.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 324.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 322.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 322.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 322.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 322.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 321.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 321.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 321.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 320.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 320.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 320.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 319.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 318.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 318.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 316.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 316.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 316.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 316.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 315.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 314.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 314.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 314.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 313.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 312.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 312.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 311.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 308.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 308.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 307.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 307.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 304.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 301.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 301.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 300.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 299.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 298.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 297.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 297.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 297.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 296.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 295.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 294.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 294.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 294.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 293.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 292.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 292.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 291.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 291.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 288.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 287.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 285.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 284.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 281.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 281.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 280.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 280.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 279.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 278.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 277.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 276.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 274.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 273.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 269.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 269.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 268.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 266.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 266.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 263.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 262.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 260.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 257.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 254.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 252.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 247.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 246.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 237.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 234.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 227.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 224.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 221.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 215.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 206.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 203.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 199.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 404.0
Samples: 246

Max nTPM: 853.0
Min nTPM: 217.0
Std nTPM: 100.0
Median nTPM: 391.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 853.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 774.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 732.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 718.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 676.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 656.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 647.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 646.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 643.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 641.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 640.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 628.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 616.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 596.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 567.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 566.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 562.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 561.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 561.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 557.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 548.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 547.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 536.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 533.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 529.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 528.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 524.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 524.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 521.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 515.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 512.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 512.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 511.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 504.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 491.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 491.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 484.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 481.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 480.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 479.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 478.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 476.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 473.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 469.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 468.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 467.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 464.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 463.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 461.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 461.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 458.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 458.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 456.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 453.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 453.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 449.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 446.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 446.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 446.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 446.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 445.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 445.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 445.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 444.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 443.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 443.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 442.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 440.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 440.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 439.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 437.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 436.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 436.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 434.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 433.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 432.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 431.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 431.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 431.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 429.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 429.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 427.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 426.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 424.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 424.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 423.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 422.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 421.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 421.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 419.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 419.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 419.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 417.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 416.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 414.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 413.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 413.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 413.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 410.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 410.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 409.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 408.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 408.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 407.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 407.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 406.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 405.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 405.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 403.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 403.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 402.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 401.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 400.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 398.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 398.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 397.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 397.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 396.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 396.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 395.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 392.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 392.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 392.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 391.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 390.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 390.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 389.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 388.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 387.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 384.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 384.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 384.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 383.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 383.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 382.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 381.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 378.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 378.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 377.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 377.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 376.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 376.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 375.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 375.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 375.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 373.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 370.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 369.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 369.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 369.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 366.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 365.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 364.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 363.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 361.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 360.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 359.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 358.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 358.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 358.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 357.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 357.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 357.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 357.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 356.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 355.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 355.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 354.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 353.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 353.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 351.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 347.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 347.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 344.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 344.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 344.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 344.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 342.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 341.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 341.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 337.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 336.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 335.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 334.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 333.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 332.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 332.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 331.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 330.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 328.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 328.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 327.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 325.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 325.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 325.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 324.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 323.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 322.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 320.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 318.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 317.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 316.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 315.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 315.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 314.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 312.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 312.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 311.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 311.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 311.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 310.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 310.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 308.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 308.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 307.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 304.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 304.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 304.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 303.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 301.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 301.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 298.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 297.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 297.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 294.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 292.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 292.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 289.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 288.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 282.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 282.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 281.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 281.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 279.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 279.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 274.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 270.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 268.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 249.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 245.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 245.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 239.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 239.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 224.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 222.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 217.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 398.6
Samples: 205

Max nTPM: 718.3
Min nTPM: 244.8
Std nTPM: 80.7
Median nTPM: 386.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 718.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 637.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 634.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 591.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 588.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 581.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 579.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 572.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 568.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 561.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 547.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 540.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 530.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 526.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 524.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 524.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 524.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 523.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 519.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 516.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 506.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 505.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 503.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 502.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 502.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 499.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 499.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 494.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 493.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 492.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 489.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 486.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 483.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 477.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 476.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 475.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 472.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 470.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 467.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 467.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 466.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 465.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 463.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 458.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 455.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 449.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 449.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 449.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 448.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 446.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 446.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 441.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 438.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 437.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 435.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 433.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 433.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 430.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 429.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 429.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 428.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 427.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 426.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 421.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 421.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 420.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 419.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 415.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 415.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 415.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 413.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 411.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 410.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 410.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 409.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 409.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 407.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 406.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 406.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 405.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 404.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 404.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 404.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 403.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 400.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 399.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 399.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 398.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 398.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 397.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 396.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 395.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 395.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 392.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 392.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 391.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 390.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 388.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 388.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 388.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 387.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 387.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 386.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 385.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 385.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 385.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 384.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 384.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 383.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 383.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 381.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 381.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 380.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 378.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 377.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 376.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 375.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 374.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 372.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 371.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 371.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 371.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 370.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 370.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 370.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 367.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 366.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 365.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 365.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 364.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 364.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 362.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 361.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 360.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 360.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 360.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 357.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 357.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 356.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 354.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 353.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 352.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 350.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 349.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 349.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 346.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 345.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 344.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 344.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 342.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 342.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 342.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 342.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 341.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 340.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 339.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 339.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 339.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 338.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 337.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 337.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 336.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 334.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 332.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 331.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 327.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 327.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 327.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 326.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 324.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 324.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 324.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 321.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 321.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 320.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 318.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 317.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 317.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 316.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 314.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 314.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 314.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 314.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 312.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 309.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 306.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 304.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 303.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 296.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 294.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 292.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 291.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 290.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 289.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 284.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 283.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 282.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 281.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 276.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 275.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 268.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 265.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 264.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 257.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 244.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

442.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 349.1
FF:10164-103B2 76 years, female 349.1
Nucleus accumbens
Scaled Tags Per Million: 276.6
FF:10037-101F1 23-56 years, mixed 276.6
Putamen
Scaled Tags Per Million: 410.4
FF:10176-103C5 60 years, female 410.4
Globus pallidus
Scaled Tags Per Million: 442.9
FF:10175-103C4 60 years, female 576.8
FF:10161-103A8 76 years, female 309.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.1
Pig sample Sample description nTPM
Caudate
nTPM: 71.4
Samples: 4

Max nTPM: 85.4
Min nTPM: 61.8
Sample A Female 63.1
Sample B Female 75.1
Sample C Male 85.4
Sample D Male 61.8
Putamen
nTPM: 88.1
Samples: 4

Max nTPM: 100.5
Min nTPM: 63.2
Sample A Female 89.0
Sample B Female 63.2
Sample C Male 100.5
Sample D Male 99.6
Septum
nTPM: 70.4
Samples: 4

Max nTPM: 78.2
Min nTPM: 64.5
Sample A Female 73.5
Sample B Female 65.2
Sample C Male 64.5
Sample D Male 78.2
Ventral pallidum
nTPM: 68.3
Samples: 4

Max nTPM: 76.8
Min nTPM: 59.6
Sample A Female 59.6
Sample B Female 70.6
Sample C Male 76.8
Sample D Male 66.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 169.7
Samples: 4

Max nTPM: 195.5
Min nTPM: 154.8
Sample A Male 167.2
Sample B Male 195.5
Sample C Female 154.8
Sample D Female 161.2
Septum
nTPM: 186.4
Samples: 4

Max nTPM: 201.1
Min nTPM: 175.9
Sample A Male 176.1
Sample B Male 192.3
Sample C Female 201.1
Sample D Female 175.9
Ventral forebrain
nTPM: 189.5
Samples: 4

Max nTPM: 209.6
Min nTPM: 168.0
Sample A Male 201.2
Sample B Male 168.0
Sample C Female 209.6
Sample D Female 179.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.5
68117986 Antisense, RP_040929_01_H04, Mouse strain C57BL/6J (56 days, male) 3.5
Pallidum
Expression energy: 4.7
68117986 Antisense, RP_040929_01_H04, Mouse strain C57BL/6J (56 days, male) 4.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org