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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1074.3 nTPM
HPA Brain:838.6 nTPM
GTEx:1074.3 nTPM
FANTOM5:1682.6 Scaled Tags Per Million
Pig:434.8 nTPM
Mouse:3599.7 nTPM
Allen mouse:17.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003819Antibody CAB024907Antibody CAB080183
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

838.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 838.6
2481 Female, age 94, left hemisphere 1314.0
2290 Female, age 72, unknown 961.1
1857 Female, age 85, left hemisphere 912.3
2288 Male, age 75, left hemisphere 890.1
1854 Male, age 80, left hemisphere 819.2
2289 Male, age 61, right hemisphere 712.7
2846 Female, age 79, unknown 573.2
1781 Male, age 74, unknown 525.9
Globus pallidus, externus
nTPM: 619.3
2646 Male, age 61, right hemisphere 902.8
1996 Male, age 80, right hemisphere 817.9
2772 Female, age 79, unknown 640.9
2395 Male, age 75, both hemispheres 462.0
2567 Female, age 72, unknown 273.1
Globus pallidus, internus
nTPM: 537.3
2483 Female, age 94, right hemisphere 980.3
2037 Male, age 80, right hemisphere 707.8
1818 Male, age 74, unknown 605.1
2287 Male, age 75, right hemisphere 569.5
2778 Female, age 91, both hemispheres 417.7
2566 Female, age 72, unknown 248.5
2111 Female, age 85, right hemisphere 232.2
Nucleus accumbens
nTPM: 714.1
2286 Male, age 75, left hemisphere 1024.0
1806 Female, age 85, left hemisphere 845.2
2391 Female, age 94, left hemisphere 713.5
2824 Male, age 61, right hemisphere 686.5
1856 Female, age 91, right hemisphere 681.8
2698 Female, age 72, unknown 628.7
1783 Male, age 74, unknown 617.0
2732 Male, age 80, right hemisphere 516.4
Nucleus basalis of Meynert
nTPM: 624.0
2569 Male, age 61, both hemispheres 943.6
2484 Female, age 94, left hemisphere 583.1
2393 Male, age 80, right hemisphere 537.3
2821 Male, age 75, both hemispheres 432.1
Nucleus of the diagonal band
nTPM: 704.3
1812 Female, age 91, both hemispheres 795.5
2195 Female, age 85, both hemispheres 738.2
1979 Male, age 74, unknown 706.8
2775 Male, age 80, right hemisphere 705.7
2029 Male, age 61, right hemisphere 575.3
Putamen
nTPM: 577.1
2482 Female, age 94, left hemisphere 848.3
1838 Male, age 80, right hemisphere 611.2
1937 Female, age 91, right hemisphere 605.3
2466 Female, age 79, unknown 590.7
1829 Male, age 74, unknown 560.5
2489 Female, age 72, unknown 447.9
2647 Male, age 75, left hemisphere 375.7
Septal nuclei
nTPM: 675.8
2059 Female, age 85, both hemispheres 793.6
2031 Female, age 72, unknown 791.0
1960 Male, age 74, unknown 781.1
2199 Male, age 80, right hemisphere 703.7
2009 Female, age 91, both hemispheres 652.6
2629 Female, age 94, right hemisphere 546.4
2394 Male, age 61, left hemisphere 462.2
Stria terminalis, bed nucleus
nTPM: 554.9
1974 Female, age 91, both hemispheres 591.6
2486 Female, age 94, both hemispheres 561.0
2201 Male, age 74, unknown 512.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1074.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1074.3
Samples: 246

Max nTPM: 2467.3
Min nTPM: 196.1
Std nTPM: 370.5
Median nTPM: 1025.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2467.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 2356.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 2029.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1990.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1970.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1928.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1917.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1904.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1901.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1883.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1862.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1804.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1796.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1773.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1731.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1704.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1689.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1684.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1630.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1618.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1617.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1600.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1575.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1565.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1565.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1517.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1503.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1493.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1481.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1480.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1480.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1471.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1471.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1452.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1441.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1435.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1427.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1406.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1406.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1395.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1391.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1390.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1389.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1389.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1372.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1368.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1366.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1359.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1358.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1354.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1353.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1346.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1334.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1332.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1312.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1306.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1290.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1286.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1279.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1275.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1274.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1273.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1263.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1260.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1259.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1252.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1244.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1241.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1234.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1231.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1226.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1223.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1220.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1215.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1210.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1208.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1208.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1203.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1196.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1186.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1185.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1172.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1169.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1162.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1158.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1155.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1154.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1147.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1146.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1145.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1144.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1141.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1140.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1137.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1125.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1120.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1119.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1117.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1112.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1107.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1105.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1104.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1097.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1096.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1094.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1091.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1091.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 1077.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1074.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1073.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1068.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1063.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1062.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1057.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1053.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1044.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1042.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1041.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1040.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1038.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1033.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1027.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1026.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1024.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1023.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1021.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1019.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1019.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1019.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1017.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1015.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1014.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1012.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1012.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1011.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1011.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1010.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1005.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1001.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1000.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 998.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 997.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 992.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 987.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 986.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 985.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 975.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 975.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 970.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 968.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 967.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 966.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 966.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 958.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 957.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 948.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 940.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 938.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 933.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 932.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 932.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 928.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 922.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 914.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 914.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 914.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 910.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 907.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 884.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 879.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 879.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 877.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 876.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 876.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 870.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 870.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 867.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 866.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 863.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 863.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 862.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 862.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 858.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 854.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 844.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 843.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 839.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 837.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 837.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 825.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 823.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 815.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 812.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 800.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 800.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 794.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 794.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 769.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 769.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 766.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 758.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 758.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 758.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 751.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 743.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 734.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 731.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 731.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 730.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 729.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 708.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 705.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 703.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 683.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 681.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 675.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 669.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 665.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 659.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 658.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 652.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 648.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 644.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 637.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 636.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 622.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 615.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 613.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 613.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 609.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 603.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 595.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 589.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 573.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 571.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 464.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 452.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 402.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 387.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 355.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 324.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 313.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 304.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 290.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 201.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 196.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 916.1
Samples: 246

Max nTPM: 3024.0
Min nTPM: 232.1
Std nTPM: 387.0
Median nTPM: 876.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3024.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2355.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 2315.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1913.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1834.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 1805.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1763.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1734.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1703.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1676.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1662.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1640.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1630.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1538.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1509.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1499.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1464.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1437.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1435.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 1420.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1389.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1386.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1386.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1377.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1372.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1371.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1347.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1334.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1306.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1299.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1298.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1298.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1291.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1290.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1281.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1270.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1261.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1261.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1259.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1251.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1245.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1243.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1236.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1229.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1226.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1205.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1203.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1195.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1180.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1171.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1168.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1165.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1160.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1159.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1155.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 1147.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1145.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1140.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1129.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1125.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1123.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1115.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1109.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 1107.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1102.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 1096.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1093.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 1092.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1092.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1086.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1086.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1082.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 1082.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1068.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1068.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 1053.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1051.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1050.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1048.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1044.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1041.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1037.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1031.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1027.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 1026.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1019.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1019.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1010.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 1009.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1009.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1005.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 993.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 993.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 992.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 992.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 991.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 983.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 978.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 965.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 963.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 954.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 950.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 949.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 948.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 947.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 942.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 940.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 938.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 935.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 934.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 933.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 933.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 931.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 922.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 921.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 913.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 897.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 897.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 893.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 890.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 890.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 888.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 884.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 868.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 864.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 858.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 858.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 856.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 854.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 853.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 852.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 849.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 844.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 842.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 840.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 839.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 837.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 834.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 833.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 826.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 826.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 825.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 824.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 816.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 814.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 814.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 810.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 808.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 797.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 797.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 782.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 782.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 778.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 775.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 773.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 769.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 768.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 765.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 760.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 751.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 746.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 745.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 742.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 741.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 728.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 718.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 703.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 697.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 696.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 695.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 694.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 691.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 687.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 687.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 675.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 671.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 671.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 663.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 663.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 654.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 652.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 649.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 648.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 642.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 640.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 636.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 635.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 630.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 628.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 628.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 628.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 627.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 626.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 610.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 605.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 602.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 594.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 593.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 588.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 577.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 576.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 575.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 562.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 561.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 557.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 555.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 541.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 539.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 538.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 538.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 536.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 533.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 530.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 527.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 522.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 510.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 507.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 505.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 501.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 501.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 498.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 495.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 494.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 490.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 484.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 469.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 468.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 464.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 446.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 421.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 399.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 369.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 356.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 349.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 344.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 335.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 319.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 297.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 290.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 282.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 280.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 276.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 263.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 254.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 240.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 232.1
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Brain - Putamen (basal ganglia)
Average nTPM: 848.9
Samples: 205

Max nTPM: 2252.2
Min nTPM: 260.5
Std nTPM: 304.1
Median nTPM: 857.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2252.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1743.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1507.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1507.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1414.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1409.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1405.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1390.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1388.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1378.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1369.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1353.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1330.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1310.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1303.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1296.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1289.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1283.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1280.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1279.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1254.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1249.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1212.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1205.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1205.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1189.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1168.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1152.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1150.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1146.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1144.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1136.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1129.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1118.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1117.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1116.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1109.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1105.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1103.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1101.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1098.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1096.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1092.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1090.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1079.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1078.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1075.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1065.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1059.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1057.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1054.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1051.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1040.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1025.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1021.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1014.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1011.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1009.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 1007.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1002.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 990.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 985.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 982.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 973.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 968.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 965.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 963.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 961.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 961.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 958.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 956.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 955.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 954.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 954.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 947.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 941.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 938.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 933.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 928.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 925.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 922.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 920.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 917.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 917.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 917.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 914.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 914.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 913.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 911.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 909.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 899.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 899.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 895.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 892.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 887.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 887.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 882.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 875.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 874.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 870.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 870.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 858.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 857.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 839.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 837.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 820.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 810.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 809.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 807.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 805.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 803.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 802.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 801.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 793.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 786.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 773.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 770.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 768.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 766.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 762.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 762.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 761.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 760.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 757.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 748.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 737.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 732.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 731.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 724.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 724.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 722.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 716.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 715.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 715.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 709.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 705.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 697.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 687.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 682.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 676.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 676.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 673.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 673.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 670.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 662.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 657.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 652.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 646.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 644.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 635.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 634.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 632.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 626.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 624.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 621.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 615.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 614.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 603.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 577.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 574.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 572.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 570.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 568.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 563.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 560.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 554.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 545.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 542.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 542.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 541.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 541.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 540.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 538.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 537.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 526.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 526.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 523.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 523.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 519.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 518.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 497.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 497.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 488.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 477.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 460.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 454.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 451.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 448.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 445.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 440.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 437.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 433.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 419.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 413.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 409.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 404.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 360.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 342.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 340.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 328.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 322.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 320.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 290.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 288.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 260.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1682.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1682.6
FF:10164-103B2 76 years, female 1682.6
Nucleus accumbens
Scaled Tags Per Million: 964.2
FF:10037-101F1 23-56 years, mixed 964.2
Putamen
Scaled Tags Per Million: 1404.5
FF:10176-103C5 60 years, female 1404.5
Globus pallidus
Scaled Tags Per Million: 789.2
FF:10161-103A8 76 years, female 803.9
FF:10175-103C4 60 years, female 774.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

434.8
Pig sample Sample description nTPM
Caudate
nTPM: 404.2
Samples: 4

Max nTPM: 497.0
Min nTPM: 355.8
Sample A Female 355.8
Sample B Female 405.8
Sample C Male 497.0
Sample D Male 358.0
Putamen
nTPM: 434.8
Samples: 4

Max nTPM: 538.9
Min nTPM: 355.0
Sample A Female 483.5
Sample B Female 355.0
Sample C Male 538.9
Sample D Male 361.9
Septum
nTPM: 380.3
Samples: 4

Max nTPM: 453.2
Min nTPM: 337.5
Sample A Female 365.7
Sample B Female 337.5
Sample C Male 453.2
Sample D Male 364.8
Ventral pallidum
nTPM: 384.6
Samples: 4

Max nTPM: 499.3
Min nTPM: 317.2
Sample A Female 322.5
Sample B Female 399.2
Sample C Male 499.3
Sample D Male 317.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3599.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2651.8
Samples: 4

Max nTPM: 2900.6
Min nTPM: 2436.2
Sample A Male 2436.2
Sample B Male 2530.4
Sample C Female 2740.0
Sample D Female 2900.6
Septum
nTPM: 3599.7
Samples: 4

Max nTPM: 4207.7
Min nTPM: 2860.3
Sample A Male 2860.3
Sample B Male 4207.7
Sample C Female 3564.5
Sample D Female 3766.4
Ventral forebrain
nTPM: 2636.0
Samples: 4

Max nTPM: 2870.1
Min nTPM: 2494.7
Sample A Male 2511.0
Sample B Male 2494.7
Sample C Female 2870.1
Sample D Female 2668.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 17.3
1692 Antisense, RP_Baylor_102700, Mouse strain C57BL/6J (56 days, male) 17.3
1691 Antisense, RP_Baylor_102700, Mouse strain C57BL/6J (56 days, male) 10.6
Pallidum
Expression energy: 15.5
1692 Antisense, RP_Baylor_102700, Mouse strain C57BL/6J (56 days, male) 15.5
1691 Antisense, RP_Baylor_102700, Mouse strain C57BL/6J (56 days, male) 9.4

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