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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:565.3 nTPM
HPA Brain:618.3 nTPM
GTEx:565.3 nTPM
FANTOM5:734.1 Scaled Tags Per Million
Pig:407.3 nTPM
Mouse:589.1 nTPM
Allen mouse:10.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007234Antibody CAB002507
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

618.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 428.1
1857 Female, age 85, left hemisphere 502.0
2481 Female, age 94, left hemisphere 498.3
2290 Female, age 72, unknown 453.5
1854 Male, age 80, left hemisphere 450.7
2289 Male, age 61, right hemisphere 428.6
1781 Male, age 74, unknown 380.7
2288 Male, age 75, left hemisphere 379.0
2846 Female, age 79, unknown 331.8
Globus pallidus, externus
nTPM: 618.3
1996 Male, age 80, right hemisphere 850.5
2772 Female, age 79, unknown 676.6
2646 Male, age 61, right hemisphere 604.2
2395 Male, age 75, both hemispheres 502.3
2567 Female, age 72, unknown 458.1
Globus pallidus, internus
nTPM: 579.4
2483 Female, age 94, right hemisphere 748.2
2037 Male, age 80, right hemisphere 674.7
1818 Male, age 74, unknown 590.8
2287 Male, age 75, right hemisphere 528.4
2111 Female, age 85, right hemisphere 527.2
2778 Female, age 91, both hemispheres 520.2
2566 Female, age 72, unknown 465.9
Nucleus accumbens
nTPM: 416.3
1806 Female, age 85, left hemisphere 551.2
2732 Male, age 80, right hemisphere 502.9
2286 Male, age 75, left hemisphere 419.8
2824 Male, age 61, right hemisphere 400.8
2698 Female, age 72, unknown 386.9
1783 Male, age 74, unknown 386.1
1856 Female, age 91, right hemisphere 350.8
2391 Female, age 94, left hemisphere 331.7
Nucleus basalis of Meynert
nTPM: 443.6
2569 Male, age 61, both hemispheres 652.0
2484 Female, age 94, left hemisphere 429.5
2393 Male, age 80, right hemisphere 368.7
2821 Male, age 75, both hemispheres 324.4
Nucleus of the diagonal band
nTPM: 335.7
1812 Female, age 91, both hemispheres 398.9
1979 Male, age 74, unknown 365.8
2029 Male, age 61, right hemisphere 319.0
2775 Male, age 80, right hemisphere 315.3
2195 Female, age 85, both hemispheres 279.4
Putamen
nTPM: 372.7
2482 Female, age 94, left hemisphere 448.4
1829 Male, age 74, unknown 381.6
2466 Female, age 79, unknown 379.3
2489 Female, age 72, unknown 370.9
1937 Female, age 91, right hemisphere 368.9
1838 Male, age 80, right hemisphere 344.5
2647 Male, age 75, left hemisphere 315.0
Septal nuclei
nTPM: 378.9
2199 Male, age 80, right hemisphere 491.0
2059 Female, age 85, both hemispheres 454.7
2394 Male, age 61, left hemisphere 448.6
2009 Female, age 91, both hemispheres 344.8
2031 Female, age 72, unknown 312.9
1960 Male, age 74, unknown 302.6
2629 Female, age 94, right hemisphere 297.8
Stria terminalis, bed nucleus
nTPM: 358.4
2201 Male, age 74, unknown 402.5
1974 Female, age 91, both hemispheres 343.6
2486 Female, age 94, both hemispheres 328.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

565.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 562.6
Samples: 246

Max nTPM: 1378.3
Min nTPM: 219.0
Std nTPM: 164.3
Median nTPM: 536.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1378.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1182.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1099.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1036.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1019.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1000.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 972.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 913.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 900.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 878.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 876.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 873.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 864.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 862.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 859.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 851.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 821.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 799.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 783.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 779.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 776.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 775.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 774.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 766.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 763.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 758.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 752.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 751.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 740.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 737.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 737.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 734.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 731.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 726.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 724.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 721.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 718.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 717.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 716.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 709.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 709.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 706.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 700.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 697.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 692.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 688.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 687.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 684.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 683.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 681.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 679.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 677.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 674.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 674.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 672.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 671.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 668.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 666.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 665.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 662.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 654.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 650.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 650.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 647.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 646.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 642.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 639.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 638.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 637.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 637.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 635.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 633.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 624.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 623.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 622.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 621.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 617.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 616.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 614.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 613.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 610.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 603.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 602.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 597.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 592.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 590.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 589.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 588.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 583.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 582.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 580.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 579.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 578.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 573.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 571.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 570.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 568.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 565.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 565.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 563.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 562.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 557.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 557.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 557.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 557.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 556.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 555.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 554.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 552.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 551.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 546.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 546.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 546.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 545.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 544.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 541.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 541.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 539.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 539.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 537.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 537.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 537.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 536.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 535.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 534.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 534.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 532.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 532.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 531.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 531.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 530.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 527.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 523.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 522.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 521.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 518.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 516.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 514.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 514.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 513.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 513.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 512.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 508.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 507.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 506.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 505.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 504.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 504.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 500.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 499.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 499.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 498.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 498.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 496.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 491.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 488.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 488.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 488.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 482.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 480.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 479.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 477.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 475.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 475.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 474.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 472.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 472.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 471.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 467.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 467.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 466.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 465.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 464.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 464.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 460.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 459.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 458.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 456.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 454.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 454.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 454.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 454.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 453.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 452.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 450.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 449.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 446.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 444.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 443.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 442.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 441.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 441.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 440.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 439.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 434.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 431.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 429.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 428.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 427.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 425.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 425.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 422.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 422.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 421.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 419.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 418.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 416.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 416.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 415.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 415.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 404.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 401.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 400.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 400.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 393.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 393.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 390.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 390.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 387.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 386.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 385.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 382.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 382.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 382.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 381.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 380.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 379.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 376.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 376.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 376.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 373.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 373.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 373.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 369.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 368.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 366.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 365.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 352.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 332.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 331.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 313.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 301.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 271.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 252.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 239.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 219.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 541.7
Samples: 246

Max nTPM: 1602.7
Min nTPM: 297.6
Std nTPM: 185.0
Median nTPM: 495.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1602.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1430.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1219.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1147.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1111.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1076.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1035.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1023.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 992.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 974.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 921.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 900.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 873.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 871.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 863.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 849.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 835.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 829.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 828.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 826.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 823.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 815.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 766.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 763.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 761.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 756.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 745.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 742.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 733.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 716.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 708.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 698.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 692.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 691.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 691.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 688.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 687.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 677.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 675.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 671.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 668.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 664.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 663.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 659.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 656.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 656.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 654.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 654.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 654.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 649.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 647.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 644.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 641.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 639.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 631.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 622.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 618.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 617.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 609.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 606.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 605.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 599.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 597.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 597.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 596.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 595.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 595.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 593.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 592.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 591.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 588.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 587.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 584.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 583.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 577.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 568.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 568.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 564.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 562.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 556.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 556.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 556.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 554.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 553.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 552.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 550.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 545.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 545.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 544.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 542.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 540.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 539.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 539.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 537.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 535.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 534.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 531.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 529.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 529.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 526.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 526.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 525.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 524.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 522.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 520.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 520.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 520.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 519.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 517.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 515.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 512.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 512.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 510.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 510.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 506.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 502.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 501.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 500.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 500.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 500.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 498.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 498.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 495.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 494.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 494.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 493.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 493.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 493.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 493.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 491.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 491.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 486.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 484.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 482.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 481.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 481.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 479.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 478.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 476.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 475.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 473.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 472.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 470.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 469.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 469.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 467.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 466.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 466.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 466.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 465.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 464.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 464.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 464.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 461.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 459.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 454.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 452.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 450.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 449.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 449.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 446.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 446.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 445.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 444.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 444.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 442.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 441.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 440.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 439.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 439.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 438.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 438.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 437.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 435.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 433.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 433.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 432.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 431.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 430.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 430.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 429.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 429.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 428.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 428.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 427.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 426.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 423.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 422.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 421.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 419.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 417.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 408.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 408.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 406.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 405.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 403.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 403.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 395.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 395.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 395.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 394.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 391.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 391.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 390.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 390.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 388.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 387.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 387.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 387.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 386.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 386.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 385.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 385.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 384.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 384.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 383.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 382.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 382.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 381.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 379.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 374.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 371.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 369.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 369.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 368.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 367.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 367.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 364.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 359.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 355.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 355.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 352.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 351.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 350.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 349.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 346.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 343.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 343.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 340.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 334.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 334.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 326.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 325.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 311.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 311.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 297.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 565.3
Samples: 205

Max nTPM: 1317.4
Min nTPM: 233.7
Std nTPM: 177.2
Median nTPM: 528.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1317.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1259.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1227.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1208.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1092.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 987.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 927.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 920.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 869.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 858.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 856.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 853.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 849.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 846.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 842.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 819.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 815.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 813.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 807.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 784.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 782.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 776.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 774.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 774.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 770.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 764.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 763.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 761.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 752.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 739.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 738.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 731.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 724.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 718.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 717.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 715.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 709.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 708.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 705.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 701.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 696.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 694.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 693.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 691.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 688.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 683.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 667.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 662.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 661.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 657.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 652.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 651.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 648.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 641.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 628.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 625.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 624.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 621.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 621.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 621.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 620.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 614.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 614.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 614.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 610.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 609.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 607.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 606.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 595.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 595.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 590.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 590.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 584.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 581.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 580.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 578.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 574.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 574.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 572.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 571.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 570.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 567.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 567.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 565.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 565.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 561.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 559.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 556.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 556.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 554.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 553.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 552.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 551.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 548.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 546.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 542.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 540.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 535.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 532.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 532.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 531.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 528.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 528.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 527.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 526.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 524.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 524.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 523.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 520.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 520.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 519.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 519.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 518.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 518.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 517.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 510.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 506.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 505.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 503.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 502.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 502.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 502.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 500.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 498.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 497.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 486.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 484.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 483.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 481.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 478.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 474.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 473.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 472.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 469.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 467.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 466.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 466.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 463.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 460.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 458.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 455.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 454.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 453.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 453.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 452.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 451.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 451.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 451.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 451.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 451.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 450.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 448.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 447.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 445.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 443.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 443.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 442.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 435.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 434.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 434.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 432.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 428.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 425.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 424.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 423.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 423.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 422.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 416.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 413.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 412.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 411.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 410.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 410.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 410.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 409.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 406.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 406.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 406.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 405.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 403.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 394.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 392.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 392.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 387.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 387.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 384.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 383.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 382.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 374.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 374.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 372.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 369.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 367.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 364.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 359.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 356.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 342.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 342.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 324.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 322.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 316.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 309.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 306.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 259.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 233.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

734.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 563.8
FF:10164-103B2 76 years, female 563.8
Nucleus accumbens
Scaled Tags Per Million: 449.9
FF:10037-101F1 23-56 years, mixed 449.9
Putamen
Scaled Tags Per Million: 498.3
FF:10176-103C5 60 years, female 498.3
Globus pallidus
Scaled Tags Per Million: 734.1
FF:10175-103C4 60 years, female 889.1
FF:10161-103A8 76 years, female 579.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

407.3
Pig sample Sample description nTPM
Caudate
nTPM: 311.7
Samples: 4

Max nTPM: 357.7
Min nTPM: 279.1
Sample A Female 293.4
Sample B Female 316.6
Sample C Male 357.7
Sample D Male 279.1
Putamen
nTPM: 394.0
Samples: 4

Max nTPM: 534.1
Min nTPM: 275.8
Sample A Female 534.1
Sample B Female 275.8
Sample C Male 389.0
Sample D Male 377.2
Septum
nTPM: 407.3
Samples: 4

Max nTPM: 531.0
Min nTPM: 324.3
Sample A Female 422.8
Sample B Female 324.3
Sample C Male 531.0
Sample D Male 351.1
Ventral pallidum
nTPM: 362.1
Samples: 4

Max nTPM: 488.8
Min nTPM: 276.6
Sample A Female 276.6
Sample B Female 347.4
Sample C Male 488.8
Sample D Male 335.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

589.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 482.7
Samples: 4

Max nTPM: 503.8
Min nTPM: 465.8
Sample A Male 469.1
Sample B Male 492.0
Sample C Female 465.8
Sample D Female 503.8
Septum
nTPM: 589.1
Samples: 4

Max nTPM: 657.1
Min nTPM: 503.5
Sample A Male 503.5
Sample B Male 576.5
Sample C Female 619.1
Sample D Female 657.1
Ventral forebrain
nTPM: 420.0
Samples: 4

Max nTPM: 461.5
Min nTPM: 353.3
Sample A Male 353.3
Sample B Male 461.5
Sample C Female 458.8
Sample D Female 406.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.7
227 Antisense, RP_Baylor_102672, Mouse strain C57BL/6J (56 days, male) 7.7
68269526 Antisense, RP_041129_01_G04, Mouse strain C57BL/6J (56 days, male) 7.6
226 Antisense, RP_Baylor_102672, Mouse strain C57BL/6J (56 days, male) 6.2
Pallidum
Expression energy: 10.1
68269526 Antisense, RP_041129_01_G04, Mouse strain C57BL/6J (56 days, male) 10.3
227 Antisense, RP_Baylor_102672, Mouse strain C57BL/6J (56 days, male) 9.9
226 Antisense, RP_Baylor_102672, Mouse strain C57BL/6J (56 days, male) 9.3

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