Expression of RPS13 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

RPS13 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1048.94

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

966.2

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	4804.5
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	3325.5
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	2739.2
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	2650.0
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	2477.7
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	2401.3
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	2278.5
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	2269.9
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	2114.1
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	1968.3
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	1964.4
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	1937.8
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	1920.0
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	1900.3
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	1882.3
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	1856.7
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	1838.9
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	1838.8
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	1748.5
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	1736.5
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	1722.1
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	1719.1
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	1703.1
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	1701.9
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	1696.9
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	1677.0
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	1672.6
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	1641.5
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	1634.9
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	1624.7
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	1618.9
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	1617.4
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	1596.0
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	1582.1
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	1573.4
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	1571.7
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	1565.2
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	1547.6
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	1529.3
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	1524.7
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	1518.3
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	1514.7
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	1510.6
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	1481.5
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	1479.5
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	1434.0
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	1433.6
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	1405.9
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	1403.6
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	1401.4
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	1395.6
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	1394.6
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	1382.8
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	1369.1
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	1363.5
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	1354.5
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	1353.5
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	1345.8
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	1341.0
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	1327.5
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	1314.5
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	1310.9
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	1309.5
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	1297.3
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	1291.5
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	1285.1
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	1284.7
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	1270.4
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	1267.0
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	1256.6
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	1254.7
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	1249.0
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	1242.3
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	1219.5
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	1217.0
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	1216.6
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	1214.3
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	1208.5
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	1201.3
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	1196.0
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	1185.5
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	1184.6
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	1179.3
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	1178.1
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	1177.3
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	1171.5
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	1170.2
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	1167.6
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	1161.1
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	1158.2
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	1151.4
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	1141.7
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	1136.8
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	1135.5
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	1129.2
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	1126.7
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	1118.1
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	1097.3
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	1093.3
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	1093.3
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	1090.0
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	1081.8
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	1074.1
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	1072.0
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	1071.9
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	1071.2
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	1069.1
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	1062.4
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	1060.2
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	1059.7
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	1054.1
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	1048.9
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	1048.4
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	1044.6
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	1043.7
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	1042.0
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	1041.2
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	1035.6
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	1033.0
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	1019.7
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	1018.3
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	1018.3
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	1011.0
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	1010.7
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	1010.6
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	1005.6
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	1003.2
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	996.0
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	985.0
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	977.9
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	972.2
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	968.4
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	965.4
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	963.6
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	948.2
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	947.2
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	946.4
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	941.5
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	937.8
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	935.0
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	931.1
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	929.7
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	929.5
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	928.9
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	925.6
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	920.9
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	918.2
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	917.7
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	915.9
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	913.8
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	913.8
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	910.6
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	905.5
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	904.8
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	898.2
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	898.1
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	897.7
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	895.0
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	892.1
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	887.3
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	887.3
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	884.7
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	882.8
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	882.6
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	880.5
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	877.7
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	874.1
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	873.8
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	873.5
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	871.7
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	871.5
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	871.0
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	870.2
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	864.9
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	861.9
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	858.2
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	857.7
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	853.9
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	853.1
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	850.6
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	846.4
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	846.3
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	844.7
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	841.5
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	840.7
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	835.6
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	831.5
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	830.0
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	827.5
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	826.5
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	825.7
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	824.8
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	824.7
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	822.4
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	817.1
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	815.8
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	813.9
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	811.2
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	811.0
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	809.1
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	808.4
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	806.8
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	805.3
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	801.6
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	796.2
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	793.1
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	791.8
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	790.9
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	789.2
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	787.5
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	784.7
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	780.6
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	780.1
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	774.0
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	773.0
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	772.5
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	771.9
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	769.5
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	768.7
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	768.2
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	767.5
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	766.4
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	765.2
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	764.0
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	763.9
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	763.9
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	763.8
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	761.2
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	757.9
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	757.8
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	757.7
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	757.6
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	756.7
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	755.4
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	755.3
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	751.0
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	750.9
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	742.8
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	734.4
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	734.2
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	729.7
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	725.2
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	722.9
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	720.8
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	718.8
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	716.3
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	713.9
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	711.2
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	710.9
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	710.5
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	709.9
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	709.4
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	708.2
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	706.8
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	701.6
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	700.8
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	700.2
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	699.8
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	699.1
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	696.7
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	693.9
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	693.1
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	685.2
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	684.0
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	683.7
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	677.0
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	675.7
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	673.7
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	672.9
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	671.5
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	668.2
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	667.2
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	666.4
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	664.5
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	663.9
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	658.2
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	657.6
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	655.6
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	655.1
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	651.3
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	648.9
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	646.9
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	642.4
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	641.9
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	641.1
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	637.1
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	636.1
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	625.0
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	624.1
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	624.1
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	622.4
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	615.0
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	613.1
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	606.2
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	605.7
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	605.2
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	602.3
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	594.3
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	593.2
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	589.6
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	588.5
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	585.6
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	585.0
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	582.7
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	581.2
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	576.8
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	576.2
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	573.6
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	573.1
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	572.5
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	571.2
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	570.7
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	570.2
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	568.0
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	562.6
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	561.2
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	560.6
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	558.8
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	553.2
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	552.6
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	551.0
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	548.5
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	544.9
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	541.9
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	534.2
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	533.2
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	531.4
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	527.4
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	525.4
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	520.7
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	517.4
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	515.9
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	514.6
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	510.1
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	508.7
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	505.4
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	501.5
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	494.9
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	488.3
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	487.9
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	487.5
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	487.2
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	485.5
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	483.3
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	481.9
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	479.8
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	478.3
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	476.1
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	463.2
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	454.3
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	453.9
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	440.7
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	438.5
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	430.0
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	429.6
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	428.3
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	418.3
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	417.2
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	417.1
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	377.2
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	363.9
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	344.1
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

RPS13 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1090.55

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

1094.2

Number of samples

231

Samples

Sample	Description	pTPM
DO45285	59 years, male, NA, stage:3, alive, 480 days	4188.7
DO45303	62 years, female, NA, stage:3, alive, 990 days	2611.5
DO45289	78 years, female, NA, stage:3, alive, 360 days	2591.2
DO45189	85 years, female, NA, stage:2, alive, 1200 days	2515.6
DO50814	83 years, male, NA, stage:3, alive, 420 days	2456.6
DO45307	54 years, female, NA, stage:4, dead, 240 days	2437.6
DO45299	70 years, female, NA, stage:1, alive, 1440 days	2380.1
DO45305	66 years, male, NA, stage:4, alive, 300 days	2297.2
DO23519	65 years, male, NA, stage:3, alive, 630 days	2275.8
DO23515	71 years, male, NA, stage:2, alive, 1230 days	2264.7
DO45259	65 years, male, NA, stage:3, alive, 330 days	2249.1
DO48737	52 years, male, NA, stage:1, alive, 720 days	2186.6
DO45283	60 years, male, NA, stage:3, alive, 510 days	2174.6
DO23530	53 years, male, NA, stage:4, dead, 180 days	2150.7
DO45217	69 years, female, NA, stage:3, dead, 270 days	2129.6
DO48682	72 years, female, NA, stage:3, dead, 120 days	2104.4
DO23508	79 years, female, NA, stage:2, alive, 390 days	2062.2
DO48747	62 years, male, NA, stage:3, alive, 540 days	2059.7
DO45251	57 years, female, NA, stage:2, alive, 900 days	2033.2
DO45297	61 years, female, NA, stage:4, dead, 1260 days	2031.0
DO45211	76 years, male, NA, stage:3, alive, 240 days	1941.9
DO45287	74 years, male, NA, stage:1, alive, 390 days	1933.1
DO45249	57 years, male, NA, stage:1, alive, 630 days	1872.9
DO50839	47 years, female, NA, stage:3, alive, 330 days	1842.0
DO45161	74 years, male, NA, stage:2, dead, 540 days	1840.0
DO50785	37 years, male, NA, stage:4, dead, 90 days	1797.8
DO23545	67 years, male, NA, stage:2, dead, 570 days	1672.2
DO48751	68 years, male, NA, stage:2, dead, 480 days	1668.8
DO45279	67 years, male, NA, stage:3, alive, 1290 days	1643.7
DO45219	78 years, male, NA, stage:2, alive, 1080 days	1642.8
DO50855	47 years, male, NA, stage:2, alive, 570 days	1621.0
DO45097	69 years, male, NA, stage:3, alive, 1620 days	1560.0
DO50799	66 years, female, NA, stage:2, alive, 540 days	1555.2
DO50806	70 years, male, NA, stage:4, alive, 540 days	1550.6
DO48697	64 years, female, NA, stage:2, dead, 810 days	1544.7
DO48715	58 years, female, NA, stage:2, dead, 690 days	1541.6
DO50804	81 years, male, NA, stage:2, alive, 720 days	1528.2
DO45135	77 years, male, NA, stage:1, alive, 1410 days	1478.7
DO45239	42 years, male, NA, stage:2, alive, 870 days	1447.5
DO23523	52 years, male, NA, stage:3, alive, 1080 days	1426.5
DO50793	76 years, male, NA, stage:4, alive, 540 days	1420.5
DO45093	71 years, male, NA, stage:2, dead, 720 days	1409.0
DO45221	75 years, female, NA, stage:4, dead, 390 days	1402.5
DO45273	62 years, male, NA, stage:2, alive, 480 days	1400.2
DO48730	73 years, female, NA, stage:2, alive, 630 days	1390.6
DO23536	56 years, male, NA, stage:2, alive, 930 days	1389.4
DO45095	66 years, male, NA, stage:2, alive, 1620 days	1388.3
DO45269	59 years, male, NA, stage:3, alive, 750 days	1381.4
DO23516	69 years, male, NA, stage:3, dead, 20 days	1369.8
DO48757	68 years, female, NA, stage:3, alive, 480 days	1356.6
DO50778	60 years, male, NA, stage:4, alive, 630 days	1356.4
DO50820	77 years, female, NA, stage:3, alive, 510 days	1354.8
DO48732	73 years, male, NA, stage:3, alive, 630 days	1349.8
DO45173	63 years, male, NA, stage:3, alive, 1170 days	1327.5
DO50815	62 years, male, NA, stage:3, alive, 150 days	1326.8
DO50802	49 years, male, NA, stage:2, alive, 930 days	1325.7
DO45145	78 years, male, NA, stage:3, dead, 60 days	1318.1
DO48720	62 years, female, NA, stage:2, alive, 570 days	1314.0
DO45165	75 years, male, NA, stage:2, alive, 690 days	1313.5
DO50791	79 years, female, NA, stage:1, dead, 480 days	1289.8
DO23526	66 years, male, NA, stage:3, alive, 1050 days	1287.6
DO48741	64 years, male, NA, stage:3, alive, 240 days	1284.7
DO48672	81 years, male, NA, stage:2, alive, 450 days	1270.9
DO50825	70 years, male, NA, stage:2, alive, 390 days	1265.7
DO48736	76 years, female, NA, stage:1, alive, 600 days	1261.8
DO45183	72 years, female, NA, stage:2, dead, 570 days	1250.5
DO45175	74 years, male, NA, stage:2, alive, 1140 days	1248.0
DO45277	64 years, male, NA, stage:3, alive, 600 days	1242.5
DO45127	73 years, male, NA, stage:3, dead, 420 days	1240.6
DO23533	61 years, male, NA, stage:2, alive, 900 days	1240.4
DO45139	63 years, male, NA, stage:3, alive, 1320 days	1215.4
DO45103	47 years, male, NA, stage:3, alive, 450 days	1207.1
DO48723	73 years, male, NA, stage:1, alive, 600 days	1199.4
DO45203	71 years, female, NA, stage:2, alive, 1170 days	1197.5
DO45213	58 years, male, NA, stage:1, alive, 1200 days	1191.6
DO45193	68 years, female, NA, stage:4, dead, 120 days	1183.4
DO45265	73 years, male, NA, stage:3, alive, 1020 days	1182.0
DO48725	66 years, male, NA, stage:1, alive, 780 days	1178.3
DO45227	57 years, female, NA, stage:2, alive, 1020 days	1176.8
DO45185	89 years, male, NA, stage:2, alive, 600 days	1174.6
DO48727	81 years, female, NA, stage:2, dead, 390 days	1170.5
DO45187	32 years, female, NA, stage:1, alive, 1260 days	1167.2
DO48706	72 years, male, NA, stage:2, alive, 870 days	1163.5
DO45179	78 years, female, NA, stage:2, alive, 600 days	1146.2
DO50850	74 years, male, NA, stage:3, alive, 720 days	1139.6
DO45267	73 years, male, NA, stage:3, dead, 570 days	1137.4
DO45231	84 years, male, NA, stage:2, alive, 930 days	1134.7
DO45281	83 years, male, NA, stage:4, alive, 750 days	1132.0
DO45245	75 years, female, NA, stage:2, dead, 240 days	1126.1
DO45247	31 years, female, NA, stage:2, alive, 210 days	1117.8
DO45205	67 years, female, NA, stage:2, dead, 90 days	1117.6
DO45163	76 years, male, NA, stage:2, alive, 960 days	1113.0
DO50800	74 years, male, NA, stage:2, alive, 510 days	1098.0
DO48728	74 years, female, NA, stage:2, alive, 150 days	1091.0
DO45119	74 years, male, NA, stage:3, dead, 510 days	1090.6
DO50822	66 years, male, NA, stage:2, alive, 510 days	1086.6
DO45137	38 years, male, NA, stage:1, alive, 1320 days	1081.8
DO48746	76 years, male, NA, stage:3, alive, 570 days	1077.5
DO48712	50 years, male, NA, stage:2, alive, 810 days	1077.2
DO23525	71 years, male, NA, stage:4, alive, 1050 days	1076.9
DO227643	79 years, male, NA, stage:2, alive, 1260 days	1076.4
DO23528	45 years, female, NA, stage:2, alive, 1020 days	1063.8
DO50809	56 years, male, NA, stage:3, dead, 720 days	1061.9
DO45141	73 years, male, NA, stage:2, alive, 1320 days	1058.2
DO45253	50 years, male, NA, stage:2, alive, 870 days	1048.4
DO45261	74 years, male, NA, stage:3, alive, 990 days	1031.2
DO48759	73 years, male, NA, stage:3, alive, 720 days	1024.1
DO45157	62 years, male, NA, stage:2, alive, 1980 days	1023.6
DO48733	72 years, male, NA, stage:2, alive, 600 days	1023.2
DO23542	66 years, male, NA, stage:3, alive, 960 days	1022.3
DO45201	49 years, male, NA, stage:1, alive, 900 days	1015.4
DO23543	63 years, male, NA, stage:2, alive, 1020 days	994.7
DO50829	78 years, male, NA, stage:3, alive, 570 days	993.9
DO45255	81 years, male, NA, stage:3, alive, 720 days	992.3
DO45191	61 years, female, NA, stage:2, alive, 1200 days	991.6
DO48719	80 years, male, NA, stage:2, alive, 690 days	990.6
DO50811	62 years, male, NA, stage:1, alive, 450 days	985.1
DO48677	58 years, male, NA, stage:3, alive, 1140 days	984.8
DO45092	62 years, male, NA, stage:4, dead, 1200 days	963.3
DO45225	69 years, male, NA, stage:1, alive, 1050 days	958.2
DO45257	46 years, male, NA, stage:3, alive, 810 days	948.0
DO23547	74 years, male, NA, stage:1, alive, 1020 days	941.8
DO45243	74 years, female, NA, stage:3, alive, 930 days	940.2
DO50857	72 years, male, NA, stage:2, alive, 210 days	935.5
DO45229	74 years, male, NA, stage:1, alive, 990 days	925.8
DO50783	62 years, male, NA, stage:3, alive, 480 days	908.3
DO23521	63 years, male, NA, stage:3, alive, 1110 days	908.2
DO50844	75 years, male, NA, stage:4, alive, 300 days	903.6
DO45143	69 years, male, NA, stage:3, alive, 1290 days	902.6
DO45177	81 years, female, NA, stage:3, alive, 1260 days	895.6
DO50805	72 years, male, NA, stage:2, alive, 690 days	895.6
DO45117	73 years, female, NA, stage:2, dead, 1110 days	889.8
DO23510	80 years, female, NA, stage:2, alive, 870 days	884.3
DO50776	75 years, male, NA, stage:1, alive, 690 days	880.8
DO23538	67 years, male, NA, stage:2, alive, 450 days	880.0
DO50787	63 years, male, NA, stage:3, alive, 480 days	879.6
DO45301	56 years, male, NA, stage:2, dead, 1440 days	879.1
DO23529	72 years, male, NA, stage:4, alive, 930 days	877.1
DO50819	72 years, female, NA, stage:2, alive, 510 days	875.4
DO45121	61 years, male, NA, stage:3, alive, 1530 days	875.0
DO48717	54 years, male, NA, stage:4, dead, 180 days	873.0
DO45199	86 years, female, NA, stage:2, alive, 1350 days	872.9
DO45207	68 years, male, NA, stage:1, alive, 1050 days	868.5
DO50813	56 years, male, NA, stage:2, alive, 420 days	856.1
DO48700	78 years, female, NA, stage:2, alive, 810 days	856.1
DO23540	73 years, male, NA, stage:1, alive, 750 days	851.6
DO50808	68 years, male, NA, stage:2, alive, 570 days	849.7
DO23514	64 years, male, NA, stage:2, alive, 1290 days	847.6
DO45109	63 years, male, NA, stage:2, alive, 1590 days	846.4
DO45113	58 years, male, NA, stage:3, alive, 1560 days	835.6
DO45275	65 years, male, NA, stage:3, dead, 10 days	828.2
DO50774	68 years, female, NA, stage:2, alive, 720 days	826.7
DO45241	49 years, male, NA, stage:1, alive, 1080 days	822.6
DO50798	77 years, male, NA, stage:3, dead, 30 days	821.2
DO45233	83 years, male, NA, stage:3, alive, 900 days	819.8
DO50807	67 years, male, NA, stage:1, alive, 540 days	805.7
DO45223	67 years, male, NA, stage:4, alive, 1020 days	803.7
DO45181	84 years, female, NA, stage:2, alive, 1200 days	798.7
DO45171	56 years, male, NA, stage:3, alive, 600 days	788.9
DO45131	53 years, male, NA, stage:4, dead, 360 days	787.1
DO50789	73 years, female, NA, stage:2, alive, 570 days	784.9
DO45159	65 years, male, NA, stage:3, alive, 1470 days	782.1
DO23549	74 years, male, NA, stage:3, alive, 990 days	781.3
DO48679	72 years, male, NA, stage:2, alive, 1200 days	780.7
DO50859	77 years, male, NA, stage:2, alive, 180 days	779.9
DO23537	79 years, male, NA, stage:2, dead, 900 days	777.9
DO45155	69 years, male, NA, stage:2, alive, 2160 days	773.5
DO23513	76 years, male, NA, stage:3, alive, 1200 days	766.6
DO45153	77 years, female, NA, stage:2, alive, 1380 days	763.5
DO45197	51 years, male, NA, stage:2, alive, 1170 days	752.4
DO23546	63 years, male, NA, stage:2, alive, 1050 days	749.4
DO45209	70 years, male, NA, stage:4, alive, 1350 days	744.8
DO23548	78 years, female, NA, stage:1, alive, 840 days	743.8
DO50816	63 years, male, NA, stage:2, alive, 390 days	741.6
DO50818	65 years, male, NA, stage:2, alive, 510 days	732.4
DO227801	77 years, female, NA, stage:1, alive, 660 days	726.1
DO23524	71 years, female, NA, stage:2, alive, 1050 days	720.0
DO23541	65 years, male, NA, stage:2, alive, 930 days	708.8
DO23539	77 years, male, NA, stage:1, alive, 1110 days	708.3
DO48693	71 years, male, NA, stage:2, alive, 900 days	703.1
DO48695	77 years, male, NA, stage:2, alive, 720 days	700.5
DO48674	80 years, male, NA, stage:2, alive, 1260 days	687.0
DO45169	74 years, male, NA, stage:3, alive, 1350 days	678.2
DO50817	75 years, male, NA, stage:2, alive, 390 days	676.3
DO48743	69 years, female, NA, stage:2, alive, 570 days	675.7
DO50832	73 years, male, NA, stage:3, alive, 90 days	673.7
DO45091	56 years, male, NA, stage:2, dead, 1320 days	672.3
DO23535	67 years, male, NA, stage:1, alive, 960 days	668.6
DO50840	49 years, male, NA, stage:2, alive, 330 days	668.3
DO45235	68 years, female, NA, stage:1, alive, 900 days	664.8
DO23544	67 years, male, NA, stage:2, alive, 960 days	651.0
DO23517	62 years, male, NA, stage:2, alive, 1200 days	650.8
DO48704	68 years, female, NA, stage:3, alive, 750 days	643.8
DO45099	46 years, male, NA, stage:3, alive, 1590 days	643.6
DO45096	69 years, male, NA, stage:2, dead, 1290 days	642.8
DO45133	64 years, male, NA, stage:3, dead, 660 days	638.3
DO48761	55 years, male, NA, stage:2, alive, 870 days	630.3
DO45123	78 years, female, NA, stage:2, dead, 570 days	623.3
DO50803	62 years, female, NA, stage:1, alive, 540 days	619.9
DO23531	78 years, female, NA, stage:3, alive, 900 days	599.9
DO48716	71 years, male, NA, stage:2, alive, 720 days	597.2
DO45149	70 years, female, NA, stage:2, alive, 1260 days	592.3
DO23527	72 years, male, NA, stage:1, alive, 1050 days	587.4
DO45115	81 years, male, NA, stage:2, alive, 840 days	587.3
DO23551	73 years, male, NA, stage:3, dead, 150 days	579.0
DO23518	67 years, male, NA, stage:2, alive, 1320 days	572.6
DO45125	58 years, male, NA, stage:3, alive, 1680 days	568.7
DO48742	76 years, male, NA, stage:2, alive, 600 days	557.9
DO45215	65 years, male, NA, stage:2, alive, 1170 days	555.3
DO23511	83 years, female, NA, stage:3, dead, 180 days	541.3
DO45129	61 years, male, NA, stage:3, alive, 1470 days	538.5
DO23550	69 years, male, NA, stage:1, alive, 990 days	537.0
DO45195	62 years, male, NA, stage:1, alive, 390 days	535.3
DO23534	60 years, male, NA, stage:2, alive, 840 days	530.7
DO23512	60 years, male, NA, stage:1, alive, 1260 days	527.6
DO45237	58 years, male, NA, stage:2, alive, 900 days	518.7
DO48760	70 years, female, NA, stage:2, alive, 690 days	516.0
DO48681	57 years, male, NA, stage:2, alive, 900 days	513.2
DO48721	58 years, female, NA, stage:1, alive, 900 days	510.3
DO48701	78 years, male, NA, stage:2, alive, 780 days	508.9
DO50845	72 years, male, NA, stage:3, alive, 210 days	502.8
DO45094	76 years, male, NA, stage:3, alive, 1650 days	499.8
DO45263	67 years, male, NA, stage:3, dead, 270 days	485.2
DO23552	80 years, female, NA, stage:1, alive, 810 days	468.0
DO45111	74 years, male, NA, stage:2, alive, 1590 days	437.8
DO45101	63 years, male, NA, stage:2, alive, 1680 days	403.0
DO45107	63 years, female, NA, stage:2, alive, 1710 days	360.7
DO45105	61 years, male, NA, stage:1, alive, 1680 days	345.2
DO23532	71 years, female, NA, stage:1, alive, 960 days	318.3
DO23509	60 years, male, NA, stage:3, dead, 780 days	292.1
DO45167	67 years, male, NA, stage:2, dead, 1440 days	230.0
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
1021	Tumor	0.6
285	Tumor	0.5
327	Tumor	0.5
743	Tumor	0.4
113	Tumor	0.4
1027	Tumor	0.4
557	Tumor	0.4
727	Tumor	0.4
537	Tumor	0.4
1032	Normal	0.4
367	Tumor	0.4
1022	Normal	0.3
965	Tumor	0.3
135	Tumor	0.3
636	Normal	0.3
353	Tumor	0.3
195	Tumor	0.3
724	Normal	0.3
172	Normal	0.3
685	Tumor	0.3
414	Normal	0.3
815	Tumor	0.3
186	Normal	0.3
721	Tumor	0.3
1031	Tumor	0.3
746	Normal	0.3
964	Normal	0.3
1026	Normal	0.3
558	Normal	0.3
1025	Tumor	0.3
223	Tumor	0.3
446	Normal	0.3
131	Tumor	0.3
723	Tumor	0.3
777	Tumor	0.3
851	Tumor	0.2
938	Normal	0.2
162	Normal	0.2
1041	Tumor	0.2
393	Tumor	0.2
368	Normal	0.2
756	Normal	0.2
983	Tumor	0.2
1028	Normal	0.2
955	Tumor	0.2
466	Normal	0.2
884	Normal	0.2
981	Tumor	0.2
737	Tumor	0.2
395	Tumor	0.2
1014	Normal	0.2
912	Normal	0.2
661	Tumor	0.2
451	Tumor	0.2
862	Normal	0.2
745	Tumor	0.2
432	Normal	0.2
462	Normal	0.2
514	Normal	0.2
567	Tumor	0.2
356	Normal	0.2
187	Tumor	0.2
331	Tumor	0.2
112	Tumor	0.2
926	Normal	0.2
376	Normal	0.2
648	Normal	0.2
145	Tumor	0.2
467	Tumor	0.2
778	Normal	0.2
864	Normal	0.2
523	Tumor	0.2
227	Tumor	0.2
413	Tumor	0.2
478	Normal	0.2
568	Normal	0.2
852	Normal	0.2
385	Tumor	0.2
742	Normal	0.2
481	Tumor	0.2
978	Normal	0.2
572	Normal	0.2
958	Normal	0.2
436	Normal	0.2
148	Normal	0.2
738	Normal	0.2
191	Tumor	0.2
517	Tumor	0.2
922	Normal	0.2
824	Normal	0.2
865	Tumor	0.2
426	Normal	0.2
314	Normal	0.2
443	Tumor	0.2
358	Normal	0.2
617	Tumor	0.2
387	Tumor	0.2
882	Normal	0.2
966	Normal	0.2
422	Normal	0.2
188	Normal	0.2
445	Tumor	0.2
366	Normal	0.2
937	Tumor	0.2
713	Tumor	0.2
728	Normal	0.2
472	Normal	0.2
284	Normal	0.2
431	Tumor	0.2
662	Normal	0.1
1042	Normal	0.1
967	Tumor	0.1
286	Normal	0.1
497	Tumor	0.1
785	Tumor	0.1
696	Normal	0.1
1016	Normal	0.1
571	Tumor	0.1
982	Normal	0.1
428	Normal	0.1
664	Normal	0.1
267	Tumor	0.1
361	Tumor	0.1
171	Tumor	0.1
786	Normal	0.1
342	Normal	0.1
666	Normal	0.1
228	Normal	0.1
434	Normal	0.1
866	Normal	0.1
212	Normal	0.1
384	Normal	0.1
984	Normal	0.1
545	Tumor	0.1
533	Tumor	0.1
573	Tumor	0.1
647	Tumor	0.1
128	Normal	0.1
214	Normal	0.1
564	Normal	0.1
878	Normal	0.1
618	Normal	0.1
124	Normal	0.1
818	Normal	0.1
362	Normal	0.1
918	Normal	0.1
111	Normal	0.1
412	Normal	0.1
394	Normal	0.1
1044	Normal	0.1
616	Normal	0.1
755	Tumor	0.1
528	Normal	0.1
421	Tumor	0.1
114	Normal	0.1
1015	Tumor	0.1
494	Normal	0.1
525	Tumor	0.1
392	Normal	0.1
628	Normal	0.1
132	Normal	0.1
615	Tumor	0.1
663	Tumor	0.1
527	Tumor	0.1
332	Normal	0.1
136	Normal	0.1
424	Normal	0.1
147	Tumor	0.1
665	Tumor	0.1
944	Normal	0.1
917	Tumor	0.1
328	Normal	0.1
671	Tumor	0.1
916	Normal	0.1
396	Normal	0.1
686	Normal	0.1
482	Normal	0.1
138	Normal	0.1
534	Normal	0.1
858	Normal	0.1
355	Tumor	0.1
231	Tumor	0.1
444	Normal	0.1
526	Normal	0.1
968	Normal	0.1
468	Normal	0.1
515	Tumor	0.1
976	Normal	0.1
452	Normal	0.1
365	Tumor	0.1
464	Normal	0.1
1046	Normal	0.1
127	Tumor	0.1
524	Normal	0.1
484	Normal	0.1
232	Normal	0.1
716	Normal	0.1
715	Tumor	0.1
513	Tumor	0.1
278	Normal	0.1
488	Normal	0.1
126	Normal	0.1
635	Tumor	0.1
435	Tumor	0.1
465	Tumor	0.1
672	Normal	0.1
817	Tumor	0.1
722	Normal	0.1
221	Tumor	0.1
137	Tumor	0.1
161	Tumor	0.1
352	Normal	0.0
386	Normal	0.0
448	Normal	0.0
957	Tumor	0.0
642	Normal	0.0
518	Normal	0.0
1043	Tumor	0.0
951	Tumor	0.0
364	Normal	0.0
493	Tumor	0.0
218	Normal	0.0
923	Tumor	0.0
952	Normal	0.0
224	Normal	0.0
433	Tumor	0.0
388	Normal	0.0
142	Normal	0.0
924	Normal	0.0
868	Normal	0.0
474	Normal	0.0
185	Tumor	0.0
351	Tumor	0.0
257	Tumor	0.0
473	Tumor	0.0
196	Normal	0.0
411	Tumor	0.0
427	Tumor	0.0
953	Tumor	0.0
262	Normal	0.0
217	Tumor	0.0
272	Normal	0.0
271	Tumor	0.0
714	Normal	0.0
391	Tumor	0.0
744	Normal	0.0
546	Normal	0.0
258	Normal	0.0
698	Normal	0.0
363	Tumor	N/A
535	Tumor	0.0
695	Tumor	0.0
146	Normal	0.0
554	Normal	0.0
125	Tumor	0.0
574	Normal	0.0
222	Normal	0.0
492	Normal	0.0
344	Normal	0.0
298	Normal	0.0
312	Normal	0.0
416	Normal	0.0
456	Normal	0.0
873	Tumor	0.0
516	Normal	0.0
423	Tumor	0.0
881	Tumor	0.0
867	Tumor	0.0
425	Tumor	0.0
861	Tumor	0.0
211	Tumor	0.0
816	Normal	0.0
697	Tumor	0.0
123	Tumor	0.0
357	Tumor	0.0
213	Tumor	0.0
487	Tumor	0.0
354	Normal	0.0
447	Tumor	0.0
874	Normal	0.0
954	Normal	0.0
536	Normal	0.0
268	Normal	0.0
963	Tumor	0.0
383	Tumor	0.0
857	Tumor	0.0
943	Tumor	0.0
814	Normal	0.0
913	Tumor	0.0
863	Tumor	0.0
627	Tumor	-0.1
471	Tumor	-0.1
277	Tumor	-0.1
283	Tumor	-0.1
915	Tumor	-0.1
375	Tumor	-0.1
141	Tumor	-0.1
483	Tumor	-0.1
261	Tumor	-0.1
914	Normal	-0.1
813	Tumor	-0.1
883	Tumor	-0.1
563	Tumor	-0.1
461	Tumor	-0.1
956	Normal	-0.1
311	Tumor	-0.1
455	Tumor	-0.1
553	Tumor	-0.1
921	Tumor	-0.1
975	Tumor	-0.1
415	Tumor	-0.1
1013	Tumor	-0.1
463	Tumor	-0.1
477	Tumor	-0.1
538	Normal	-0.1
977	Tumor	-0.1
641	Tumor	-0.1
343	Tumor	-0.1
313	Tumor	-0.1
297	Tumor	-0.1
341	Tumor	-0.1
741	Tumor	-0.1
877	Tumor	-0.2
911	Tumor	-0.2
823	Tumor	-0.2
192	Normal	-0.2
498	Normal	-0.2
925	Tumor	-0.2
1045	Tumor	-0.3
491	Tumor	-0.3
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA005985
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS