We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
COX6A1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • COX6A1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:922.4 nTPM
HPA Brain:569.5 nTPM
GTEx:922.4 nTPM
FANTOM5:577.3 Scaled Tags Per Million
Pig:101.8 nTPM
Mouse:834.3 nTPM
Allen mouse:6.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA062394
Glial cells Low
Neuronal cells High


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

569.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 435.6
2846 Female, age 79, unknown 468.6
1854 Male, age 80, left hemisphere 461.8
1857 Female, age 85, left hemisphere 456.9
2481 Female, age 94, left hemisphere 455.8
2288 Male, age 75, left hemisphere 443.2
2290 Female, age 72, unknown 442.5
1781 Male, age 74, unknown 436.6
2289 Male, age 61, right hemisphere 319.3
Globus pallidus, externus
nTPM: 544.6
2772 Female, age 79, unknown 733.9
1996 Male, age 80, right hemisphere 667.8
2395 Male, age 75, both hemispheres 532.8
2567 Female, age 72, unknown 404.8
2646 Male, age 61, right hemisphere 383.9
Globus pallidus, internus
nTPM: 569.5
2287 Male, age 75, right hemisphere 720.7
1818 Male, age 74, unknown 621.0
2778 Female, age 91, both hemispheres 612.1
2037 Male, age 80, right hemisphere 611.5
2483 Female, age 94, right hemisphere 556.7
2566 Female, age 72, unknown 493.4
2111 Female, age 85, right hemisphere 370.9
Nucleus accumbens
nTPM: 436.3
1856 Female, age 91, right hemisphere 522.2
2698 Female, age 72, unknown 488.2
2286 Male, age 75, left hemisphere 486.5
1806 Female, age 85, left hemisphere 449.7
1783 Male, age 74, unknown 448.1
2391 Female, age 94, left hemisphere 400.4
2824 Male, age 61, right hemisphere 356.3
2732 Male, age 80, right hemisphere 338.9
Nucleus basalis of Meynert
nTPM: 421.0
2484 Female, age 94, left hemisphere 446.6
2821 Male, age 75, both hemispheres 441.4
2393 Male, age 80, right hemisphere 398.4
2569 Male, age 61, both hemispheres 397.6
Nucleus of the diagonal band
nTPM: 490.8
2775 Male, age 80, right hemisphere 626.5
1812 Female, age 91, both hemispheres 577.2
2195 Female, age 85, both hemispheres 507.5
2029 Male, age 61, right hemisphere 409.6
1979 Male, age 74, unknown 333.1
Putamen
nTPM: 401.0
1838 Male, age 80, right hemisphere 464.1
1937 Female, age 91, right hemisphere 461.3
2466 Female, age 79, unknown 456.9
2482 Female, age 94, left hemisphere 431.2
1829 Male, age 74, unknown 354.2
2489 Female, age 72, unknown 321.7
2647 Male, age 75, left hemisphere 317.3
Septal nuclei
nTPM: 446.0
1960 Male, age 74, unknown 598.9
2031 Female, age 72, unknown 525.6
2009 Female, age 91, both hemispheres 448.2
2059 Female, age 85, both hemispheres 437.1
2629 Female, age 94, right hemisphere 418.6
2394 Male, age 61, left hemisphere 347.8
2199 Male, age 80, right hemisphere 345.8
Stria terminalis, bed nucleus
nTPM: 415.3
1974 Female, age 91, both hemispheres 532.0
2201 Male, age 74, unknown 362.8
2486 Female, age 94, both hemispheres 351.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

922.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 822.2
Samples: 246

Max nTPM: 2511.9
Min nTPM: 361.2
Std nTPM: 273.6
Median nTPM: 775.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2511.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2227.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2053.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2039.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1664.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1644.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1561.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1452.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1395.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1280.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1261.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1257.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1254.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1241.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1212.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1187.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1179.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1161.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1140.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1128.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1101.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1091.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1079.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1079.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1073.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1066.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1054.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1051.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1049.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1049.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1047.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1022.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1020.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1015.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1006.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1005.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1001.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 995.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 995.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 992.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 984.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 979.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 972.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 971.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 970.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 968.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 967.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 966.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 964.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 964.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 955.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 951.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 949.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 947.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 946.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 942.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 939.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 929.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 925.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 923.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 917.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 912.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 908.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 906.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 900.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 899.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 898.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 887.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 884.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 881.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 880.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 878.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 878.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 874.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 873.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 871.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 871.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 868.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 867.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 864.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 861.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 859.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 856.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 856.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 852.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 850.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 849.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 849.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 842.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 839.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 839.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 833.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 831.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 829.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 828.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 827.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 826.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 825.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 824.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 823.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 819.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 816.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 816.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 815.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 813.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 812.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 811.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 809.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 808.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 806.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 799.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 798.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 795.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 788.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 785.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 784.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 782.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 781.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 781.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 780.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 777.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 777.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 776.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 774.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 770.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 768.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 768.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 766.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 764.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 762.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 762.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 759.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 758.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 758.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 756.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 755.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 753.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 752.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 752.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 752.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 747.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 746.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 746.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 745.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 745.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 742.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 741.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 741.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 737.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 736.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 733.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 729.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 728.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 726.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 724.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 718.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 715.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 712.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 707.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 704.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 704.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 702.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 699.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 699.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 698.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 697.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 696.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 696.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 695.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 692.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 692.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 689.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 687.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 681.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 680.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 679.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 678.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 678.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 674.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 674.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 668.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 665.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 663.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 662.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 661.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 659.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 658.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 656.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 655.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 650.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 650.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 644.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 643.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 640.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 640.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 639.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 637.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 636.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 635.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 629.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 629.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 628.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 627.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 624.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 620.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 614.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 612.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 610.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 608.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 607.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 604.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 602.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 601.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 596.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 595.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 593.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 593.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 592.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 591.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 589.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 572.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 571.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 568.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 560.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 559.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 556.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 553.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 544.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 530.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 527.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 523.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 517.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 511.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 510.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 501.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 498.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 497.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 490.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 489.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 476.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 464.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 451.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 442.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 430.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 404.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 361.2
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 892.4
Samples: 246

Max nTPM: 2581.3
Min nTPM: 361.2
Std nTPM: 264.7
Median nTPM: 858.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2581.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1982.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1953.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1640.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1600.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1522.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1401.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1392.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1388.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1378.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1369.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1351.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1305.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1296.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1288.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1265.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1264.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 1259.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1252.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1225.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1219.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1215.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1202.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1186.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1167.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1158.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1155.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1154.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1150.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1147.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1140.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1139.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1135.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1133.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1129.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1129.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1126.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1124.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1118.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1116.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1102.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1099.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1097.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1093.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1089.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1087.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1082.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1074.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1073.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1070.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1061.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1060.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1060.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1059.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1058.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1054.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1051.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1038.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1023.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1021.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1015.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1007.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1005.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1002.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1000.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 997.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 995.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 987.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 979.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 977.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 977.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 976.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 974.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 974.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 971.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 970.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 970.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 970.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 970.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 965.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 963.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 958.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 955.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 954.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 952.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 948.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 946.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 943.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 938.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 935.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 928.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 928.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 928.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 922.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 920.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 917.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 917.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 907.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 907.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 903.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 901.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 900.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 899.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 898.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 896.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 894.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 893.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 892.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 892.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 890.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 887.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 883.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 881.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 880.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 874.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 872.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 868.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 868.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 863.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 862.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 861.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 859.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 858.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 858.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 857.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 855.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 851.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 850.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 847.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 844.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 843.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 842.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 836.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 833.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 832.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 826.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 826.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 825.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 824.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 824.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 821.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 819.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 816.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 812.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 812.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 811.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 809.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 809.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 806.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 805.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 804.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 798.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 794.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 792.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 785.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 783.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 781.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 779.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 776.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 773.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 771.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 770.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 767.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 765.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 765.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 764.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 763.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 761.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 757.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 756.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 756.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 752.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 752.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 752.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 750.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 750.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 747.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 743.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 740.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 739.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 738.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 736.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 735.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 733.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 733.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 732.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 722.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 720.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 720.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 718.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 718.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 716.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 715.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 708.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 699.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 697.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 693.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 692.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 690.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 687.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 686.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 685.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 682.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 679.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 676.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 675.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 673.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 673.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 672.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 670.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 667.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 657.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 654.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 653.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 652.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 645.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 628.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 624.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 623.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 621.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 619.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 615.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 611.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 611.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 608.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 598.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 591.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 585.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 585.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 580.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 566.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 559.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 547.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 543.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 528.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 517.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 516.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 483.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 479.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 465.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 463.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 451.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 445.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 443.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 439.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 361.2
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 922.4
Samples: 205

Max nTPM: 1914.5
Min nTPM: 430.3
Std nTPM: 223.9
Median nTPM: 899.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1914.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1712.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1515.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1486.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1448.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1400.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1357.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1348.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1327.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1320.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1289.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1276.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1271.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1253.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1235.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1235.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1227.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1227.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1213.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1209.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1208.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1206.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1198.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1196.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1189.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1185.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1177.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1172.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 1167.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1161.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1160.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1157.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1151.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1147.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1130.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1130.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1122.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1115.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1115.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1096.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1088.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1085.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1081.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1077.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1075.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1060.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1055.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1052.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1048.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1048.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1044.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1043.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1040.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1039.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1031.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1030.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1026.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1022.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1017.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1015.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1013.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1005.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 999.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 996.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 994.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 993.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 991.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 990.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 988.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 985.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 977.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 967.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 962.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 961.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 959.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 958.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 956.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 953.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 953.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 952.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 950.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 946.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 945.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 944.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 944.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 942.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 941.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 940.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 932.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 929.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 925.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 923.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 922.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 921.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 919.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 916.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 915.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 914.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 913.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 912.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 908.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 905.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 899.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 897.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 897.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 896.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 893.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 893.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 891.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 891.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 890.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 886.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 885.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 884.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 882.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 881.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 879.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 867.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 866.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 864.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 863.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 862.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 860.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 859.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 859.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 857.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 854.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 848.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 847.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 845.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 844.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 843.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 842.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 841.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 840.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 838.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 831.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 827.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 821.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 819.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 815.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 809.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 808.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 807.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 805.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 798.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 796.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 796.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 795.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 793.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 787.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 785.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 778.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 769.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 766.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 765.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 761.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 760.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 755.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 750.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 746.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 743.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 743.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 740.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 740.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 736.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 722.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 722.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 718.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 717.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 709.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 707.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 706.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 697.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 696.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 695.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 693.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 689.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 679.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 679.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 670.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 668.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 663.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 659.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 657.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 650.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 641.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 629.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 624.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 618.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 617.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 606.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 600.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 599.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 586.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 581.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 568.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 565.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 560.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 554.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 537.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 537.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 527.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 462.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 430.3
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

577.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 431.3
FF:10164-103B2 76 years, female 431.3
Nucleus accumbens
Scaled Tags Per Million: 351.1
FF:10037-101F1 23-56 years, mixed 351.1
Putamen
Scaled Tags Per Million: 577.3
FF:10176-103C5 60 years, female 577.3
Globus pallidus
Scaled Tags Per Million: 451.4
FF:10175-103C4 60 years, female 488.1
FF:10161-103A8 76 years, female 414.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.8
Pig sample Sample description nTPM
Caudate
nTPM: 85.7
Samples: 4

Max nTPM: 104.3
Min nTPM: 71.5
Sample A Female 77.1
Sample B Female 90.0
Sample C Male 104.3
Sample D Male 71.5
Putamen
nTPM: 101.8
Samples: 4

Max nTPM: 135.2
Min nTPM: 77.9
Sample A Female 94.4
Sample B Female 77.9
Sample C Male 135.2
Sample D Male 99.8
Septum
nTPM: 82.4
Samples: 4

Max nTPM: 86.4
Min nTPM: 77.8
Sample A Female 86.4
Sample B Female 77.8
Sample C Male 83.9
Sample D Male 81.3
Ventral pallidum
nTPM: 81.9
Samples: 4

Max nTPM: 90.7
Min nTPM: 73.9
Sample A Female 73.9
Sample B Female 90.7
Sample C Male 88.8
Sample D Male 74.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

834.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 766.3
Samples: 4

Max nTPM: 1018.7
Min nTPM: 597.1
Sample A Male 728.8
Sample B Male 1018.7
Sample C Female 597.1
Sample D Female 720.7
Septum
nTPM: 720.5
Samples: 4

Max nTPM: 824.5
Min nTPM: 573.2
Sample A Male 669.0
Sample B Male 824.5
Sample C Female 815.2
Sample D Female 573.2
Ventral forebrain
nTPM: 834.3
Samples: 4

Max nTPM: 1117.7
Min nTPM: 658.5
Sample A Male 876.5
Sample B Male 658.5
Sample C Female 1117.7
Sample D Female 684.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.9
69080022 Antisense, RP_050324_01_D12, Mouse strain C57BL/6J (56 days, male) 5.9
Pallidum
Expression energy: 6.7
69080022 Antisense, RP_050324_01_D12, Mouse strain C57BL/6J (56 days, male) 6.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org