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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:402.7 nTPM
HPA Brain:610.9 nTPM
GTEx:402.7 nTPM
FANTOM5:962.8 Scaled Tags Per Million
Pig:614.6 nTPM
Mouse:668.5 nTPM
Allen mouse:19.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA023977Antibody CAB005388
Glial cells HighHigh
Neuronal cells Not detectedHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

610.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 452.1
2846 Female, age 79, unknown 530.9
2288 Male, age 75, left hemisphere 528.7
1854 Male, age 80, left hemisphere 454.6
1857 Female, age 85, left hemisphere 453.9
1781 Male, age 74, unknown 453.2
2481 Female, age 94, left hemisphere 438.6
2290 Female, age 72, unknown 417.7
2289 Male, age 61, right hemisphere 338.8
Globus pallidus, externus
nTPM: 584.6
2395 Male, age 75, both hemispheres 698.0
2772 Female, age 79, unknown 650.4
2567 Female, age 72, unknown 535.6
1996 Male, age 80, right hemisphere 535.3
2646 Male, age 61, right hemisphere 503.5
Globus pallidus, internus
nTPM: 610.9
2287 Male, age 75, right hemisphere 791.7
2778 Female, age 91, both hemispheres 672.5
2566 Female, age 72, unknown 587.6
2111 Female, age 85, right hemisphere 587.0
2483 Female, age 94, right hemisphere 569.1
1818 Male, age 74, unknown 554.9
2037 Male, age 80, right hemisphere 513.5
Nucleus accumbens
nTPM: 475.6
2391 Female, age 94, left hemisphere 617.0
2698 Female, age 72, unknown 531.4
2286 Male, age 75, left hemisphere 496.7
1783 Male, age 74, unknown 480.6
1856 Female, age 91, right hemisphere 470.9
1806 Female, age 85, left hemisphere 444.3
2824 Male, age 61, right hemisphere 393.0
2732 Male, age 80, right hemisphere 370.9
Nucleus basalis of Meynert
nTPM: 462.5
2821 Male, age 75, both hemispheres 548.1
2569 Male, age 61, both hemispheres 462.4
2393 Male, age 80, right hemisphere 452.2
2484 Female, age 94, left hemisphere 387.5
Nucleus of the diagonal band
nTPM: 440.2
1812 Female, age 91, both hemispheres 564.9
2775 Male, age 80, right hemisphere 502.4
2029 Male, age 61, right hemisphere 429.3
2195 Female, age 85, both hemispheres 401.9
1979 Male, age 74, unknown 302.5
Putamen
nTPM: 489.4
2647 Male, age 75, left hemisphere 575.7
1829 Male, age 74, unknown 574.2
2466 Female, age 79, unknown 514.6
1937 Female, age 91, right hemisphere 489.1
2482 Female, age 94, left hemisphere 460.7
1838 Male, age 80, right hemisphere 453.1
2489 Female, age 72, unknown 358.6
Septal nuclei
nTPM: 413.3
2031 Female, age 72, unknown 533.5
1960 Male, age 74, unknown 480.0
2009 Female, age 91, both hemispheres 432.1
2394 Male, age 61, left hemisphere 425.8
2629 Female, age 94, right hemisphere 412.8
2199 Male, age 80, right hemisphere 307.5
2059 Female, age 85, both hemispheres 301.3
Stria terminalis, bed nucleus
nTPM: 377.7
1974 Female, age 91, both hemispheres 455.8
2486 Female, age 94, both hemispheres 339.8
2201 Male, age 74, unknown 337.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

402.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 393.3
Samples: 246

Max nTPM: 1015.1
Min nTPM: 159.1
Std nTPM: 140.7
Median nTPM: 356.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1015.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 861.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 843.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 842.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 810.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 771.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 738.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 733.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 664.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 657.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 655.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 654.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 643.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 637.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 626.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 618.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 610.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 606.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 598.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 596.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 589.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 586.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 585.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 579.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 574.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 571.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 571.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 570.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 563.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 559.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 558.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 551.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 549.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 548.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 546.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 543.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 539.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 535.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 533.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 533.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 530.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 524.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 523.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 519.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 515.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 511.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 508.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 505.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 505.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 502.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 498.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 497.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 492.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 491.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 491.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 488.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 487.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 483.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 482.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 482.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 481.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 480.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 480.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 479.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 474.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 468.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 467.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 464.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 460.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 459.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 457.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 454.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 453.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 449.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 446.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 445.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 442.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 439.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 437.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 435.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 433.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 429.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 428.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 425.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 424.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 423.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 422.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 421.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 418.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 417.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 417.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 415.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 414.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 411.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 410.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 410.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 409.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 407.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 404.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 400.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 397.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 396.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 396.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 395.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 395.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 392.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 387.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 387.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 386.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 384.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 384.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 383.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 383.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 382.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 373.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 372.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 371.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 362.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 360.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 358.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 358.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 357.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 356.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 356.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 353.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 352.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 352.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 350.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 350.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 349.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 346.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 343.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 343.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 342.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 341.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 340.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 339.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 338.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 338.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 337.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 336.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 335.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 334.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 334.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 334.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 333.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 333.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 332.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 332.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 332.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 331.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 331.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 330.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 330.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 328.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 327.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 327.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 326.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 325.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 324.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 320.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 320.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 317.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 314.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 313.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 313.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 312.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 311.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 310.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 310.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 309.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 308.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 308.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 307.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 306.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 304.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 303.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 303.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 301.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 300.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 299.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 299.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 296.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 296.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 295.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 294.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 292.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 292.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 291.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 287.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 286.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 285.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 283.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 281.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 281.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 278.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 277.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 276.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 275.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 274.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 274.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 273.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 270.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 267.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 265.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 265.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 263.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 259.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 259.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 258.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 254.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 251.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 245.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 242.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 242.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 239.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 239.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 238.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 237.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 237.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 235.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 235.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 234.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 234.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 233.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 226.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 226.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 226.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 226.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 225.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 223.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 223.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 223.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 219.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 214.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 213.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 212.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 208.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 206.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 204.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 201.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 196.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 194.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 194.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 168.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 159.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 363.5
Samples: 246

Max nTPM: 643.7
Min nTPM: 122.1
Std nTPM: 108.0
Median nTPM: 364.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 643.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 627.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 625.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 622.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 593.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 585.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 577.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 577.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 572.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 570.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 565.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 547.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 545.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 544.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 532.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 529.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 522.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 520.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 520.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 512.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 507.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 506.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 505.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 504.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 504.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 503.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 502.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 497.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 494.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 493.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 493.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 489.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 487.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 487.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 486.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 485.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 485.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 477.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 477.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 476.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 475.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 473.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 471.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 471.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 470.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 469.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 468.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 467.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 466.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 463.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 462.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 460.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 459.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 453.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 452.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 450.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 444.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 444.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 444.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 443.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 442.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 441.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 439.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 438.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 438.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 435.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 434.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 433.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 428.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 428.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 427.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 427.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 426.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 425.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 421.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 421.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 417.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 416.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 415.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 414.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 413.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 410.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 410.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 409.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 406.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 403.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 402.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 402.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 402.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 401.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 401.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 399.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 396.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 396.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 394.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 392.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 391.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 391.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 390.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 388.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 388.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 383.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 380.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 380.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 379.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 378.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 377.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 377.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 374.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 373.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 372.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 371.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 371.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 370.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 370.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 369.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 369.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 368.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 368.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 367.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 367.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 365.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 365.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 364.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 361.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 357.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 355.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 353.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 352.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 352.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 346.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 346.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 346.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 344.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 343.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 340.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 339.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 337.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 335.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 335.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 334.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 334.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 333.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 332.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 331.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 331.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 331.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 331.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 330.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 328.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 328.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 327.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 326.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 324.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 323.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 320.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 320.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 318.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 318.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 317.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 316.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 315.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 314.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 312.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 312.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 311.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 311.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 310.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 310.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 309.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 308.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 307.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 307.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 304.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 303.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 301.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 299.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 298.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 295.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 294.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 294.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 293.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 292.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 291.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 291.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 289.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 286.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 279.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 278.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 277.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 275.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 275.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 272.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 267.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 265.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 262.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 261.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 261.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 259.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 258.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 257.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 256.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 256.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 255.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 248.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 245.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 245.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 244.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 240.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 239.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 234.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 232.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 232.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 231.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 230.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 229.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 227.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 227.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 227.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 223.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 219.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 218.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 216.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 214.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 211.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 209.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 207.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 205.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 201.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 199.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 199.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 197.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 192.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 189.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 185.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 185.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 181.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 179.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 176.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 176.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 176.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 174.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 170.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 167.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 134.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 122.1
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 402.7
Samples: 205

Max nTPM: 994.1
Min nTPM: 192.3
Std nTPM: 128.8
Median nTPM: 370.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 994.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 940.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 758.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 715.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 703.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 682.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 678.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 659.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 648.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 642.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 639.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 635.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 627.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 614.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 612.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 603.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 598.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 569.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 567.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 566.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 558.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 557.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 556.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 553.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 550.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 548.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 548.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 548.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 545.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 539.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 536.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 533.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 524.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 523.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 521.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 518.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 516.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 512.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 508.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 506.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 505.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 499.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 497.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 493.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 486.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 485.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 481.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 480.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 479.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 473.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 472.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 472.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 471.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 468.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 467.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 467.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 458.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 458.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 457.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 457.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 454.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 448.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 448.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 448.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 447.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 445.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 445.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 441.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 438.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 434.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 433.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 431.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 430.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 428.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 427.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 425.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 421.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 420.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 416.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 413.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 413.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 412.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 411.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 409.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 407.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 406.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 406.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 405.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 404.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 402.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 398.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 397.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 390.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 389.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 389.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 386.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 385.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 385.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 384.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 377.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 375.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 373.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 370.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 367.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 367.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 365.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 364.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 363.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 361.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 358.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 358.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 358.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 357.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 357.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 356.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 356.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 355.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 353.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 352.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 351.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 351.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 351.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 349.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 348.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 347.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 346.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 345.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 344.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 343.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 342.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 342.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 342.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 338.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 338.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 338.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 336.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 336.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 336.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 335.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 335.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 333.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 333.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 329.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 325.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 324.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 324.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 321.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 318.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 318.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 317.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 316.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 316.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 316.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 316.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 313.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 312.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 310.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 310.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 308.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 308.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 306.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 305.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 304.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 303.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 300.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 295.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 293.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 293.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 292.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 290.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 289.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 289.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 288.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 287.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 284.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 282.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 279.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 279.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 278.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 269.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 269.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 267.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 266.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 265.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 261.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 257.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 257.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 257.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 255.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 250.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 247.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 247.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 246.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 235.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 234.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 232.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 223.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 221.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 216.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 211.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 210.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 205.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 201.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 194.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 192.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

962.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 662.3
FF:10164-103B2 76 years, female 662.3
Nucleus accumbens
Scaled Tags Per Million: 772.1
FF:10037-101F1 23-56 years, mixed 772.1
Putamen
Scaled Tags Per Million: 962.8
FF:10176-103C5 60 years, female 962.8
Globus pallidus
Scaled Tags Per Million: 620.6
FF:10175-103C4 60 years, female 641.1
FF:10161-103A8 76 years, female 600.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

614.6
Pig sample Sample description nTPM
Caudate
nTPM: 448.3
Samples: 4

Max nTPM: 506.4
Min nTPM: 401.6
Sample A Female 448.5
Sample B Female 401.6
Sample C Male 506.4
Sample D Male 436.6
Putamen
nTPM: 614.6
Samples: 4

Max nTPM: 957.2
Min nTPM: 477.5
Sample A Female 477.5
Sample B Female 481.6
Sample C Male 957.2
Sample D Male 541.9
Septum
nTPM: 448.5
Samples: 4

Max nTPM: 484.6
Min nTPM: 418.3
Sample A Female 468.6
Sample B Female 418.3
Sample C Male 484.6
Sample D Male 422.5
Ventral pallidum
nTPM: 465.6
Samples: 4

Max nTPM: 521.0
Min nTPM: 434.6
Sample A Female 451.7
Sample B Female 434.6
Sample C Male 521.0
Sample D Male 454.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

668.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 668.6
Samples: 4

Max nTPM: 692.5
Min nTPM: 650.7
Sample A Male 676.4
Sample B Male 654.6
Sample C Female 692.5
Sample D Female 650.7
Septum
nTPM: 389.0
Samples: 4

Max nTPM: 412.7
Min nTPM: 351.6
Sample A Male 400.4
Sample B Male 391.4
Sample C Female 412.7
Sample D Female 351.6
Ventral forebrain
nTPM: 566.7
Samples: 4

Max nTPM: 601.0
Min nTPM: 493.0
Sample A Male 594.4
Sample B Male 493.0
Sample C Female 578.2
Sample D Female 601.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.1
68162204 Antisense, RP_041122_01_G02, Mouse strain C57BL/6J (56 days, male) 19.4
70805906 Antisense, RP_050725_02_E03, Mouse strain C57BL/6J (56 days, male) 18.7
Pallidum
Expression energy: 16.6
68162204 Antisense, RP_041122_01_G02, Mouse strain C57BL/6J (56 days, male) 16.6
70805906 Antisense, RP_050725_02_E03, Mouse strain C57BL/6J (56 days, male) 16.5

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