PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:741.7 nTPM
FANTOM5:1118.3 Scaled Tags Per Million
Pig:633.9 nTPM
Mouse:357.1 nTPM
Allen mouse:14.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 741.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 557.8
2188 Female, age 91, both hemispheres 673.3
2301 Female, age 85, both hemispheres 598.1
2090 Male, age 80, both hemispheres 503.2
1984 Male, age 76, both hemispheres 456.5
Area postrema
nTPM: 516.0
2799 Male, age 61, both hemispheres 630.3
2306 Male, age 80, both hemispheres 507.0
2054 Male, age 76, both hemispheres 410.6
Dorsal cochlear nucleus
nTPM: 517.1
2187 Female, age 91, both hemispheres 622.5
2802 Male, age 74, right hemisphere 579.4
2378 Male, age 80, both hemispheres 488.5
2370 Male, age 61, both hemispheres 455.4
2058 Male, age 76, both hemispheres 439.6
Dorsal medullary reticular nucleus
nTPM: 537.3
2040 Female, age 85, both hemispheres 711.9
2373 Male, age 61, both hemispheres 476.8
2088 Male, age 76, both hemispheres 423.2
Dorsal motor vagal complex
nTPM: 482.6
2000 Male, age 74, unknown 597.1
2133 Female, age 91, both hemispheres 596.1
2844 Male, age 55, unknown 506.7
2813 Female, age 72, unknown 495.5
2643 Male, age 74, both hemispheres 473.0
2797 Male, age 61, both hemispheres 423.2
2185 Male, age 76, both hemispheres 407.4
2807 Female, age 85, both hemispheres 362.1
Dorsal tegmental nucleus
nTPM: 537.3
2083 Male, age 80, both hemispheres 579.8
2326 Male, age 74, both hemispheres 568.8
2358 Male, age 61, both hemispheres 538.7
1936 Male, age 76, left hemisphere 461.9
Dorsolateral tegmental area
nTPM: 517.9
2751 Female, age 85, both hemispheres 637.0
2654 Male, age 80, both hemispheres 598.9
2337 Male, age 61, both hemispheres 507.7
2360 Male, age 74, both hemispheres 434.1
2141 Male, age 76, both hemispheres 411.9
Gigantocellular reticular nuclei, medullary
nTPM: 587.7
2314 Male, age 61, both hemispheres 672.7
2387 Female, age 91, both hemispheres 645.6
1876 Female, age 85, both hemispheres 609.4
2310 Male, age 80, both hemispheres 555.5
2462 Male, age 74, both hemispheres 541.2
2022 Male, age 76, right hemisphere 501.8
Gigantocellular reticular nuclei, pars
nTPM: 580.1
2168 Male, age 76, both hemispheres 689.4
2336 Male, age 61, both hemispheres 578.3
2084 Female, age 85, both hemispheres 558.6
2706 Male, age 80, both hemispheres 549.2
2330 Male, age 80, both hemispheres 525.1
Inferior olive
nTPM: 580.9
2563 Male, age 74, both hemispheres 642.4
2628 Female, age 91, both hemispheres 617.5
2178 Male, age 61, both hemispheres 588.5
2085 Female, age 85, both hemispheres 577.9
2379 Male, age 80, both hemispheres 478.3
Kolliker-Fuse nucleus
nTPM: 619.7
2793 Female, age 91, left hemisphere 766.1
2163 Male, age 80, both hemispheres 645.4
2315 Male, age 76, right hemisphere 447.5
Lateral lemniscal nuclei
nTPM: 663.3
2169 Male, age 76, both hemispheres 753.1
2036 Male, age 80, both hemispheres 680.0
2320 Female, age 91, left hemisphere 645.7
2746 Female, age 85, left hemisphere 623.8
2453 Male, age 74, right hemisphere 613.8
Lateral medullary reticular nucleus
nTPM: 623.8
2305 Male, age 74, both hemispheres 736.3
2044 Male, age 76, both hemispheres 698.2
2852 Male, age 80, both hemispheres 607.8
2374 Male, age 61, both hemispheres 601.1
2804 Female, age 91, both hemispheres 565.4
2190 Female, age 85, both hemispheres 534.2
Lateral parabrachial nucleus
nTPM: 567.0
2139 Female, age 85, right hemisphere 605.7
2013 Male, age 80, both hemispheres 598.1
2792 Male, age 76, both hemispheres 538.0
2790 Male, age 61, both hemispheres 526.1
Lateral vestibular nucleus
nTPM: 585.8
2184 Male, age 76, both hemispheres 618.0
2311 Male, age 80, both hemispheres 553.6
Locus coeruleus
nTPM: 562.5
2014 Male, age 55, unknown 639.0
2720 Male, age 74, both hemispheres 620.6
2123 Female, age 91, both hemispheres 600.1
2317 Female, age 72, unknown 551.9
2788 Male, age 74, unknown 517.6
1980 Male, age 76, both hemispheres 510.2
2162 Male, age 80, both hemispheres 497.8
Medial olivary nucleus
nTPM: 558.1
1943 Male, age 61, both hemispheres 637.7
2851 Male, age 80, both hemispheres 565.5
1962 Male, age 76, both hemispheres 539.9
2138 Female, age 91, both hemispheres 489.1
Medial parabrachial nucleus
nTPM: 575.6
2170 Female, age 91, both hemispheres 719.6
2854 Male, age 80, both hemispheres 649.3
2463 Female, age 85, right hemisphere 526.4
2156 Male, age 61, both hemispheres 516.4
2786 Male, age 76, both hemispheres 466.4
Medial periolivary nuclei
nTPM: 636.3
2063 Male, age 76, both hemispheres 722.7
2171 Female, age 85, both hemispheres 711.8
2791 Male, age 74, right hemisphere 629.6
2458 Female, age 91, both hemispheres 563.2
2081 Male, age 80, both hemispheres 554.3
Medial vestibular nucleus
nTPM: 659.1
2801 Male, age 74, both hemispheres 755.3
2624 Male, age 61, both hemispheres 720.7
2803 Female, age 91, both hemispheres 694.5
2134 Male, age 76, both hemispheres 609.3
2093 Male, age 80, both hemispheres 599.1
2743 Female, age 85, both hemispheres 575.5
Motor facial nucleus
nTPM: 627.9
2062 Male, age 76, both hemispheres 760.2
2365 Male, age 74, right hemisphere 672.2
2697 Female, age 85, both hemispheres 669.9
2327 Male, age 80, both hemispheres 571.1
2795 Female, age 91, both hemispheres 566.3
2126 Male, age 61, both hemispheres 527.9
Motor hypoglossal nucleus
nTPM: 587.5
2125 Female, age 91, both hemispheres 719.5
2132 Female, age 85, both hemispheres 630.3
2182 Male, age 80, both hemispheres 625.7
2461 Male, age 61, both hemispheres 583.6
2277 Male, age 76, both hemispheres 378.3
Motor trigeminal nucleus
nTPM: 565.0
2560 Male, age 74, both hemispheres 690.5
2079 Male, age 80, both hemispheres 577.3
2321 Female, age 91, both hemispheres 573.7
2335 Male, age 61, both hemispheres 505.8
2309 Male, age 76, both hemispheres 477.5
Nuclei of the trapezoid body
nTPM: 649.8
2159 Male, age 61, both hemispheres 772.9
1983 Male, age 76, both hemispheres 690.5
2735 Female, age 85, both hemispheres 651.2
2166 Male, age 80, both hemispheres 579.0
2368 Female, age 91, both hemispheres 555.2
Nucleus ambiguus
nTPM: 525.1
2096 Female, age 85, both hemispheres 550.3
2071 Male, age 76, both hemispheres 499.8
Nucleus cuneatus
nTPM: 528.8
2564 Male, age 74, both hemispheres 618.8
2376 Male, age 61, both hemispheres 592.2
2380 Male, age 80, both hemispheres 563.7
2131 Male, age 76, both hemispheres 537.6
2381 Male, age 80, both hemispheres 534.6
2808 Female, age 85, both hemispheres 495.5
2100 Male, age 76, both hemispheres 474.3
2805 Female, age 91, both hemispheres 472.9
2562 Male, age 61, both hemispheres 469.9
Nucleus gracilis
nTPM: 561.3
2627 Male, age 74, both hemispheres 650.9
2382 Male, age 80, both hemispheres 601.6
2299 Female, age 85, both hemispheres 431.3
Nucleus raphe magnus
nTPM: 674.4
2160 Male, age 61, both hemispheres 847.8
2172 Female, age 85, both hemispheres 678.6
2455 Male, age 74, both hemispheres 652.0
2051 Male, age 76, both hemispheres 645.6
2328 Male, age 80, both hemispheres 628.8
2459 Female, age 91, both hemispheres 593.6
Nucleus raphe obscurus
nTPM: 616.2
2845 Female, age 85, midline 727.4
2800 Male, age 61, midline 659.1
2142 Male, age 76, midline 461.9
Nucleus raphe pallidus
nTPM: 638.0
1924 Male, age 61, midline 763.3
2183 Male, age 80, midline 662.1
2145 Male, age 76, midline 488.5
Nucleus tractus solitarii
nTPM: 449.4
2144 Female, age 91, right hemisphere 625.3
2656 Male, age 76, both hemispheres 418.2
2307 Male, age 80, both hemispheres 377.4
2191 Female, age 85, both hemispheres 376.9
Paramedian reticular nucleus
nTPM: 648.9
2050 Female, age 85, both hemispheres 777.4
2057 Male, age 80, both hemispheres 634.1
2052 Male, age 76, both hemispheres 604.0
2313 Male, age 61, both hemispheres 580.3
Parvicellular reticular nuclei
nTPM: 619.9
2558 Male, age 74, both hemispheres 639.3
2119 Male, age 80, both hemispheres 620.5
2095 Male, age 76, both hemispheres 599.8
Parvicellular reticular nuclei, medullary
nTPM: 557.0
2189 Female, age 91, both hemispheres 634.0
2091 Female, age 85, both hemispheres 556.5
2181 Male, age 80, left hemisphere 480.7
Pedunculopontine tegmental nucleus
nTPM: 513.3
2334 Male, age 80, both hemispheres 546.9
2338 Male, age 61, both hemispheres 507.6
1921 Female, age 85, both hemispheres 485.5
Peritrigeminal nucleus
nTPM: 613.0
2179 Male, age 61, both hemispheres 660.1
2136 Male, age 76, both hemispheres 613.2
2067 Female, age 85, both hemispheres 565.7
Pontine nuclei
nTPM: 741.7
1863 Male, age 55, unknown 909.2
2727 Male, age 61, right hemisphere 838.3
2109 Female, age 72, unknown 820.9
2454 Male, age 74, left hemisphere 754.8
2787 Female, age 85, both hemispheres 729.3
1968 Male, age 76, left hemisphere 704.7
2319 Female, age 91, both hemispheres 656.7
2115 Male, age 80, left hemisphere 519.6
Pontine raphe nucleus
nTPM: 577.8
2122 Female, age 85, midline 620.8
2853 Male, age 76, midline 534.8
Posteroventral cochlear nucleus
nTPM: 567.7
2135 Female, age 91, both hemispheres 652.0
2341 Male, age 80, both hemispheres 583.9
2752 Female, age 85, both hemispheres 556.0
2070 Male, age 76, both hemispheres 528.0
2371 Male, age 61, both hemispheres 518.5
Prepositus hypoglossal nucleus
nTPM: 600.1
2855 Female, age 85, right hemisphere 723.7
2086 Male, age 80, both hemispheres 476.5
Principal sensory trigeminal nucleus
nTPM: 643.3
2158 Male, age 61, both hemispheres 730.2
2367 Female, age 91, left hemisphere 657.5
2008 Male, age 80, left hemisphere 631.8
2324 Male, age 76, both hemispheres 553.7
Reticular pontine nucleus, caudal
nTPM: 629.9
2559 Male, age 74, both hemispheres 665.0
2092 Male, age 76, both hemispheres 629.3
2457 Female, age 91, both hemispheres 620.1
2332 Male, age 80, right hemisphere 605.3
Reticular pontine nucleus, oral
nTPM: 611.1
2012 Female, age 85, both hemispheres 671.9
2366 Female, age 91, both hemispheres 651.3
2361 Male, age 74, both hemispheres 628.4
1939 Male, age 80, both hemispheres 611.1
2167 Male, age 76, both hemispheres 492.7
Reticulotegmental nucleus
nTPM: 597.0
2452 Male, age 74, both hemispheres 619.7
2322 Female, age 91, both hemispheres 616.6
2325 Male, age 76, both hemispheres 595.7
2333 Male, age 80, both hemispheres 556.0
Spinal trigeminal nucleus, caudal
nTPM: 600.6
2390 Female, age 91, both hemispheres 780.4
2312 Male, age 61, both hemispheres 567.5
2447 Male, age 76, both hemispheres 565.4
2642 Male, age 74, both hemispheres 560.7
2308 Male, age 80, both hemispheres 528.7
Spinal trigeminal nucleus, interpolar
nTPM: 680.3
2625 Male, age 61, both hemispheres 852.8
2066 Male, age 76, right hemisphere 763.0
2389 Female, age 91, both hemispheres 632.5
2033 Male, age 80, both hemispheres 607.6
2386 Female, age 85, both hemispheres 545.6
Spinal trigeminal nucleus, oral
nTPM: 526.4
2164 Male, age 80, both hemispheres 620.2
2737 Female, age 85, both hemispheres 514.7
1978 Male, age 76, both hemispheres 444.4
Spinal vestibular nucleus
nTPM: 589.9
2806 Female, age 85, both hemispheres 631.1
2384 Male, age 74, both hemispheres 615.8
2186 Female, age 91, both hemispheres 613.0
2780 Male, age 80, both hemispheres 574.4
2748 Male, age 76, both hemispheres 563.4
2796 Male, age 61, both hemispheres 541.4
Subcoeruleus area
nTPM: 553.8
2369 Female, age 85, left hemisphere 625.9
1958 Male, age 80, both hemispheres 605.9
2089 Male, age 76, left hemisphere 539.9
2323 Female, age 91, left hemisphere 520.3
2451 Male, age 74, both hemispheres 476.8
Superior olive
nTPM: 660.6
1875 Female, age 85, both hemispheres 756.4
2020 Male, age 76, both hemispheres 664.7
2364 Male, age 74, right hemisphere 660.2
2561 Female, age 91, both hemispheres 612.5
2329 Male, age 80, right hemisphere 609.2
Superior vestibular nucleus
nTPM: 516.3
2015 Male, age 80, both hemispheres 603.9
2383 Male, age 74, both hemispheres 490.3
2061 Male, age 76, both hemispheres 454.5
Ventral medullary reticular nucleus
nTPM: 527.6
2372 Male, age 61, both hemispheres 565.0
2060 Male, age 76, both hemispheres 490.1
Ventral periolivary nuclei
nTPM: 611.9
2023 Male, age 76, both hemispheres 682.5
2165 Male, age 80, both hemispheres 659.8
2130 Female, age 85, both hemispheres 576.7
2794 Female, age 91, left hemisphere 528.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 596.2
2180 Male, age 61, both hemispheres 633.7
2741 Female, age 85, both hemispheres 621.2
1986 Male, age 76, both hemispheres 618.5
2302 Female, age 91, both hemispheres 554.0
2118 Male, age 80, both hemispheres 553.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 611.8
2840 Female, age 85, both hemispheres 668.1
2449 Male, age 74, both hemispheres 644.9
1959 Male, age 76, both hemispheres 619.2
2161 Male, age 80, both hemispheres 591.7
2359 Male, age 61, both hemispheres 577.1
2456 Female, age 91, both hemispheres 569.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1118.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 790.3
FF:10182-103D2 60 years, female 895.9
FF:10165-103B3 76 years, female 684.8
Medulla oblongata
Scaled Tags Per Million: 541.8
FF:10155-103A2 76 years, female 594.7
FF:10038-101F2 18-64 years, mixed 548.0
FF:10174-103C3 60 years, female 482.8
Pons
Scaled Tags Per Million: 1118.3
FF:10033-101E6 18-54 years, mixed 1118.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 633.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 552.1
Samples: 4

Max nTPM: 716.9
Min nTPM: 460.1
Sample A Female 716.9
Sample B Female 521.0
Sample C Male 510.4
Sample D Male 460.1
Pons
nTPM: 633.9
Samples: 4

Max nTPM: 735.3
Min nTPM: 470.4
Sample A Female 735.3
Sample B Female 470.4
Sample C Male 641.7
Sample D Male 688.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 357.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 357.1
Samples: 4

Max nTPM: 384.8
Min nTPM: 339.1
Sample A Male 340.8
Sample B Male 384.8
Sample C Female 339.1
Sample D Female 363.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 14.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.3
70805906 Antisense, RP_050725_02_E03, Mouse strain C57BL/6J (56 days, male) 15.7
68162204 Antisense, RP_041122_01_G02, Mouse strain C57BL/6J (56 days, male) 12.9
Pons
Expression energy: 14.6
70805906 Antisense, RP_050725_02_E03, Mouse strain C57BL/6J (56 days, male) 15.8
68162204 Antisense, RP_041122_01_G02, Mouse strain C57BL/6J (56 days, male) 13.5

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