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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:372.3 nTPM
HPA Brain:347.4 nTPM
GTEx:372.3 nTPM
FANTOM5:447.2 Scaled Tags Per Million
Pig:103.1 nTPM
Mouse:391.5 nTPM
Allen mouse:3.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007730Antibody CAB004682
Glial cells MediumMedium
Neuronal cells Not detectedLow




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

347.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 252.4
2481 Female, age 94, left hemisphere 466.8
2288 Male, age 75, left hemisphere 269.0
2290 Female, age 72, unknown 231.4
2289 Male, age 61, right hemisphere 227.1
1854 Male, age 80, left hemisphere 224.6
1857 Female, age 85, left hemisphere 223.6
2846 Female, age 79, unknown 190.2
1781 Male, age 74, unknown 186.1
Globus pallidus, externus
nTPM: 327.4
1996 Male, age 80, right hemisphere 466.1
2772 Female, age 79, unknown 431.0
2395 Male, age 75, both hemispheres 344.6
2646 Male, age 61, right hemisphere 245.1
2567 Female, age 72, unknown 150.2
Globus pallidus, internus
nTPM: 347.4
1818 Male, age 74, unknown 402.7
2037 Male, age 80, right hemisphere 376.8
2483 Female, age 94, right hemisphere 375.2
2778 Female, age 91, both hemispheres 374.9
2287 Male, age 75, right hemisphere 354.4
2111 Female, age 85, right hemisphere 335.7
2566 Female, age 72, unknown 212.0
Nucleus accumbens
nTPM: 236.8
2391 Female, age 94, left hemisphere 342.1
2286 Male, age 75, left hemisphere 315.7
2732 Male, age 80, right hemisphere 221.6
1806 Female, age 85, left hemisphere 220.0
2698 Female, age 72, unknown 209.0
1856 Female, age 91, right hemisphere 201.4
2824 Male, age 61, right hemisphere 199.9
1783 Male, age 74, unknown 184.5
Nucleus basalis of Meynert
nTPM: 234.8
2569 Male, age 61, both hemispheres 260.6
2484 Female, age 94, left hemisphere 242.7
2393 Male, age 80, right hemisphere 227.4
2821 Male, age 75, both hemispheres 208.4
Nucleus of the diagonal band
nTPM: 213.4
1812 Female, age 91, both hemispheres 276.5
2775 Male, age 80, right hemisphere 230.5
2029 Male, age 61, right hemisphere 197.6
1979 Male, age 74, unknown 188.9
2195 Female, age 85, both hemispheres 173.6
Putamen
nTPM: 205.3
2482 Female, age 94, left hemisphere 362.2
1937 Female, age 91, right hemisphere 207.5
2466 Female, age 79, unknown 199.6
1829 Male, age 74, unknown 198.6
1838 Male, age 80, right hemisphere 166.7
2489 Female, age 72, unknown 161.5
2647 Male, age 75, left hemisphere 141.4
Septal nuclei
nTPM: 220.6
2199 Male, age 80, right hemisphere 243.3
2394 Male, age 61, left hemisphere 237.8
2009 Female, age 91, both hemispheres 230.9
2031 Female, age 72, unknown 228.6
2059 Female, age 85, both hemispheres 209.9
2629 Female, age 94, right hemisphere 198.0
1960 Male, age 74, unknown 195.9
Stria terminalis, bed nucleus
nTPM: 207.5
2201 Male, age 74, unknown 225.6
1974 Female, age 91, both hemispheres 216.4
2486 Female, age 94, both hemispheres 180.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

372.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 372.3
Samples: 246

Max nTPM: 768.7
Min nTPM: 192.7
Std nTPM: 110.7
Median nTPM: 358.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 768.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 743.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 741.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 700.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 687.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 675.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 622.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 617.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 591.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 573.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 563.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 559.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 559.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 558.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 550.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 549.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 549.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 541.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 540.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 538.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 536.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 528.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 524.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 515.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 512.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 511.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 505.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 505.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 504.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 501.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 500.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 499.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 493.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 489.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 489.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 487.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 486.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 479.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 478.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 478.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 477.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 474.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 473.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 472.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 471.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 471.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 469.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 469.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 468.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 467.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 466.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 458.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 457.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 455.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 446.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 445.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 444.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 444.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 443.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 443.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 442.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 440.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 439.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 439.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 438.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 437.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 436.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 436.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 430.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 430.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 428.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 428.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 427.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 424.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 424.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 420.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 418.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 418.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 417.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 417.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 416.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 416.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 415.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 415.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 414.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 412.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 405.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 404.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 401.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 399.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 399.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 397.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 394.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 394.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 393.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 392.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 388.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 387.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 387.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 387.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 386.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 385.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 385.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 383.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 383.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 378.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 377.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 377.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 376.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 374.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 371.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 369.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 369.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 368.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 368.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 365.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 364.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 363.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 360.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 360.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 360.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 359.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 358.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 357.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 357.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 355.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 353.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 350.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 348.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 347.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 346.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 346.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 344.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 342.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 341.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 341.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 339.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 338.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 335.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 334.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 334.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 333.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 330.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 329.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 329.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 328.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 327.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 326.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 325.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 323.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 321.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 319.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 319.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 317.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 317.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 317.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 317.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 315.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 312.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 311.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 311.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 310.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 310.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 308.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 306.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 304.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 304.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 304.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 303.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 303.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 302.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 300.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 298.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 295.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 292.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 291.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 291.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 289.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 285.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 285.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 285.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 284.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 284.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 283.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 283.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 281.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 280.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 280.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 278.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 277.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 277.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 276.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 276.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 273.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 272.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 269.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 268.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 268.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 267.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 267.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 266.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 264.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 263.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 263.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 262.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 261.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 259.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 258.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 257.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 256.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 254.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 254.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 253.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 251.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 251.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 251.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 251.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 250.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 250.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 249.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 248.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 248.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 244.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 244.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 242.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 241.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 241.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 238.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 238.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 238.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 235.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 234.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 232.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 230.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 230.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 228.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 223.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 222.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 220.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 216.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 215.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 213.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 206.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 202.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 194.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 192.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 347.6
Samples: 246

Max nTPM: 1160.9
Min nTPM: 169.3
Std nTPM: 119.5
Median nTPM: 318.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1160.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 770.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 682.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 657.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 652.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 648.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 631.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 627.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 605.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 591.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 589.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 579.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 578.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 558.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 542.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 539.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 531.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 530.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 518.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 518.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 514.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 512.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 511.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 499.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 489.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 486.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 486.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 480.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 479.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 479.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 476.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 475.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 466.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 464.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 459.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 453.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 452.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 452.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 449.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 446.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 443.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 441.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 440.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 440.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 437.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 434.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 432.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 430.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 428.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 426.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 426.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 425.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 420.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 419.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 418.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 417.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 416.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 414.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 409.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 407.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 403.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 401.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 401.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 400.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 400.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 399.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 396.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 395.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 394.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 394.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 392.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 391.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 390.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 390.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 389.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 388.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 388.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 387.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 386.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 379.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 379.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 378.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 374.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 374.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 370.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 370.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 369.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 368.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 367.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 366.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 358.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 354.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 354.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 353.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 353.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 349.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 349.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 346.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 345.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 345.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 345.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 343.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 340.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 337.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 336.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 336.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 335.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 335.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 332.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 332.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 332.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 329.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 327.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 326.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 326.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 326.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 326.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 325.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 324.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 323.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 319.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 318.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 318.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 317.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 316.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 316.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 314.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 313.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 311.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 311.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 308.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 307.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 306.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 306.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 305.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 305.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 304.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 304.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 303.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 302.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 302.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 301.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 301.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 299.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 299.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 299.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 299.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 297.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 296.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 296.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 294.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 294.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 293.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 293.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 292.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 292.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 291.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 289.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 289.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 289.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 288.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 287.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 285.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 284.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 284.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 281.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 280.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 278.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 278.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 277.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 276.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 274.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 273.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 273.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 272.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 271.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 271.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 270.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 270.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 269.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 268.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 268.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 267.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 266.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 266.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 266.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 265.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 264.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 264.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 262.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 261.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 259.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 259.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 258.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 258.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 257.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 256.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 255.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 255.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 255.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 255.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 254.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 254.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 253.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 252.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 250.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 249.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 248.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 248.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 247.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 246.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 246.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 245.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 242.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 242.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 240.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 238.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 237.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 233.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 227.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 226.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 225.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 224.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 224.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 221.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 217.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 217.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 217.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 213.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 212.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 211.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 210.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 208.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 207.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 206.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 205.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 203.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 201.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 200.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 200.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 194.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 194.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 187.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 181.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 180.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 169.3
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Brain - Putamen (basal ganglia)
Average nTPM: 365.9
Samples: 205

Max nTPM: 754.0
Min nTPM: 177.6
Std nTPM: 112.7
Median nTPM: 341.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 754.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 739.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 693.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 683.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 670.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 667.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 637.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 627.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 613.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 604.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 601.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 597.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 586.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 577.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 553.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 546.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 535.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 530.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 513.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 512.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 506.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 504.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 497.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 496.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 494.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 493.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 493.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 492.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 478.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 477.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 477.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 477.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 475.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 470.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 464.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 461.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 456.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 454.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 452.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 452.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 452.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 451.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 450.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 447.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 446.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 441.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 440.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 439.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 437.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 437.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 434.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 431.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 430.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 429.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 427.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 423.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 421.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 416.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 412.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 411.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 410.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 407.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 405.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 402.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 398.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 397.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 397.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 394.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 386.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 384.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 383.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 383.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 381.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 378.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 378.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 377.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 376.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 376.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 375.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 371.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 368.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 367.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 366.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 365.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 365.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 364.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 364.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 364.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 363.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 362.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 361.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 361.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 360.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 359.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 359.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 353.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 353.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 348.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 345.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 343.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 342.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 341.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 341.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 340.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 340.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 340.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 339.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 338.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 337.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 336.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 334.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 334.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 334.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 334.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 331.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 327.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 325.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 324.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 322.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 320.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 320.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 319.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 317.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 317.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 316.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 316.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 315.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 313.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 310.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 310.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 308.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 307.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 305.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 305.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 304.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 304.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 301.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 298.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 297.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 295.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 295.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 295.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 294.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 293.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 288.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 286.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 285.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 285.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 283.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 282.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 281.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 280.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 280.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 278.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 277.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 276.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 275.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 275.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 274.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 273.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 272.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 272.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 272.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 272.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 270.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 270.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 269.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 269.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 267.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 266.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 266.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 265.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 263.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 261.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 259.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 257.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 257.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 256.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 255.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 253.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 252.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 251.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 249.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 249.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 249.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 248.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 248.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 240.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 240.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 240.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 239.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 238.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 235.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 235.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 234.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 233.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 230.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 229.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 217.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 198.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 191.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 188.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 187.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 187.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 177.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

447.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 333.4
FF:10164-103B2 76 years, female 333.4
Nucleus accumbens
Scaled Tags Per Million: 250.5
FF:10037-101F1 23-56 years, mixed 250.5
Putamen
Scaled Tags Per Million: 262.8
FF:10176-103C5 60 years, female 262.8
Globus pallidus
Scaled Tags Per Million: 447.2
FF:10175-103C4 60 years, female 489.6
FF:10161-103A8 76 years, female 404.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.1
Pig sample Sample description nTPM
Caudate
nTPM: 60.0
Samples: 4

Max nTPM: 68.4
Min nTPM: 52.8
Sample A Female 53.0
Sample B Female 65.7
Sample C Male 68.4
Sample D Male 52.8
Putamen
nTPM: 103.1
Samples: 4

Max nTPM: 131.3
Min nTPM: 72.1
Sample A Female 131.3
Sample B Female 72.1
Sample C Male 115.0
Sample D Male 94.0
Septum
nTPM: 68.2
Samples: 4

Max nTPM: 87.7
Min nTPM: 59.8
Sample A Female 65.1
Sample B Female 59.8
Sample C Male 87.7
Sample D Male 60.3
Ventral pallidum
nTPM: 70.3
Samples: 4

Max nTPM: 87.9
Min nTPM: 47.5
Sample A Female 47.5
Sample B Female 87.9
Sample C Male 79.3
Sample D Male 66.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

391.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 385.2
Samples: 4

Max nTPM: 417.2
Min nTPM: 340.1
Sample A Male 402.6
Sample B Male 381.0
Sample C Female 340.1
Sample D Female 417.2
Septum
nTPM: 391.6
Samples: 4

Max nTPM: 435.9
Min nTPM: 328.6
Sample A Male 328.6
Sample B Male 435.9
Sample C Female 419.6
Sample D Female 382.1
Ventral forebrain
nTPM: 320.5
Samples: 4

Max nTPM: 363.7
Min nTPM: 293.5
Sample A Male 305.0
Sample B Male 319.9
Sample C Female 363.7
Sample D Female 293.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.0
836 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 3.4
837 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 0.8
70795736 Antisense, RP_050712_01_H04, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 3.0
836 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 5.3
837 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 1.2
70795736 Antisense, RP_050712_01_H04, Mouse strain C57BL/6J (56 days, male) 0.6

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