PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:463.1 nTPM
FANTOM5:633.7 Scaled Tags Per Million
Pig:167.9 nTPM
Mouse:515.5 nTPM
Allen mouse:4.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 463.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 307.1
2301 Female, age 85, both hemispheres 330.8
2090 Male, age 80, both hemispheres 329.1
2188 Female, age 91, both hemispheres 311.7
1984 Male, age 76, both hemispheres 256.9
Area postrema
nTPM: 328.5
2306 Male, age 80, both hemispheres 370.3
2799 Male, age 61, both hemispheres 339.2
2054 Male, age 76, both hemispheres 275.9
Dorsal cochlear nucleus
nTPM: 327.8
2187 Female, age 91, both hemispheres 350.8
2058 Male, age 76, both hemispheres 332.0
2370 Male, age 61, both hemispheres 330.8
2378 Male, age 80, both hemispheres 322.4
2802 Male, age 74, right hemisphere 302.8
Dorsal medullary reticular nucleus
nTPM: 302.4
2040 Female, age 85, both hemispheres 400.9
2088 Male, age 76, both hemispheres 260.8
2373 Male, age 61, both hemispheres 245.4
Dorsal motor vagal complex
nTPM: 276.2
2000 Male, age 74, unknown 383.3
2844 Male, age 55, unknown 336.5
2133 Female, age 91, both hemispheres 311.9
2185 Male, age 76, both hemispheres 295.7
2813 Female, age 72, unknown 268.3
2643 Male, age 74, both hemispheres 213.2
2797 Male, age 61, both hemispheres 208.9
2807 Female, age 85, both hemispheres 192.0
Dorsal tegmental nucleus
nTPM: 356.7
2083 Male, age 80, both hemispheres 392.7
2326 Male, age 74, both hemispheres 367.3
1936 Male, age 76, left hemisphere 354.0
2358 Male, age 61, both hemispheres 312.8
Dorsolateral tegmental area
nTPM: 392.6
2751 Female, age 85, both hemispheres 447.6
2654 Male, age 80, both hemispheres 401.5
2360 Male, age 74, both hemispheres 394.4
2337 Male, age 61, both hemispheres 390.9
2141 Male, age 76, both hemispheres 328.4
Gigantocellular reticular nuclei, medullary
nTPM: 321.8
1876 Female, age 85, both hemispheres 413.2
2314 Male, age 61, both hemispheres 338.4
2462 Male, age 74, both hemispheres 321.2
2387 Female, age 91, both hemispheres 306.7
2022 Male, age 76, right hemisphere 290.4
2310 Male, age 80, both hemispheres 261.0
Gigantocellular reticular nuclei, pars
nTPM: 276.8
2084 Female, age 85, both hemispheres 376.4
2168 Male, age 76, both hemispheres 282.1
2336 Male, age 61, both hemispheres 265.3
2706 Male, age 80, both hemispheres 233.3
2330 Male, age 80, both hemispheres 227.1
Inferior olive
nTPM: 392.5
2563 Male, age 74, both hemispheres 491.4
2085 Female, age 85, both hemispheres 452.8
2379 Male, age 80, both hemispheres 376.9
2178 Male, age 61, both hemispheres 362.2
2628 Female, age 91, both hemispheres 279.1
Kolliker-Fuse nucleus
nTPM: 393.4
2315 Male, age 76, right hemisphere 549.9
2163 Male, age 80, both hemispheres 364.2
2793 Female, age 91, left hemisphere 266.2
Lateral lemniscal nuclei
nTPM: 284.2
2746 Female, age 85, left hemisphere 349.6
2169 Male, age 76, both hemispheres 305.5
2036 Male, age 80, both hemispheres 299.1
2320 Female, age 91, left hemisphere 236.0
2453 Male, age 74, right hemisphere 230.7
Lateral medullary reticular nucleus
nTPM: 384.7
2305 Male, age 74, both hemispheres 523.2
2190 Female, age 85, both hemispheres 393.9
2852 Male, age 80, both hemispheres 385.6
2044 Male, age 76, both hemispheres 350.7
2804 Female, age 91, both hemispheres 339.6
2374 Male, age 61, both hemispheres 315.3
Lateral parabrachial nucleus
nTPM: 371.6
2139 Female, age 85, right hemisphere 420.1
2792 Male, age 76, both hemispheres 413.5
2013 Male, age 80, both hemispheres 372.9
2790 Male, age 61, both hemispheres 279.9
Lateral vestibular nucleus
nTPM: 350.5
2184 Male, age 76, both hemispheres 354.1
2311 Male, age 80, both hemispheres 347.0
Locus coeruleus
nTPM: 393.4
2014 Male, age 55, unknown 491.3
2123 Female, age 91, both hemispheres 429.4
2788 Male, age 74, unknown 422.3
2317 Female, age 72, unknown 405.9
1980 Male, age 76, both hemispheres 396.0
2162 Male, age 80, both hemispheres 324.4
2720 Male, age 74, both hemispheres 284.2
Medial olivary nucleus
nTPM: 446.1
2138 Female, age 91, both hemispheres 488.9
1962 Male, age 76, both hemispheres 487.4
1943 Male, age 61, both hemispheres 474.9
2851 Male, age 80, both hemispheres 333.4
Medial parabrachial nucleus
nTPM: 341.7
2170 Female, age 91, both hemispheres 403.8
2463 Female, age 85, right hemisphere 347.8
2854 Male, age 80, both hemispheres 320.5
2156 Male, age 61, both hemispheres 318.3
2786 Male, age 76, both hemispheres 318.3
Medial periolivary nuclei
nTPM: 323.4
2791 Male, age 74, right hemisphere 443.7
2063 Male, age 76, both hemispheres 357.3
2171 Female, age 85, both hemispheres 298.7
2081 Male, age 80, both hemispheres 292.6
2458 Female, age 91, both hemispheres 224.9
Medial vestibular nucleus
nTPM: 364.7
2743 Female, age 85, both hemispheres 407.3
2801 Male, age 74, both hemispheres 405.3
2134 Male, age 76, both hemispheres 366.8
2093 Male, age 80, both hemispheres 358.7
2803 Female, age 91, both hemispheres 344.0
2624 Male, age 61, both hemispheres 306.1
Motor facial nucleus
nTPM: 293.0
2365 Male, age 74, right hemisphere 383.0
2062 Male, age 76, both hemispheres 355.4
2126 Male, age 61, both hemispheres 298.5
2795 Female, age 91, both hemispheres 267.4
2697 Female, age 85, both hemispheres 257.4
2327 Male, age 80, both hemispheres 196.5
Motor hypoglossal nucleus
nTPM: 293.6
2125 Female, age 91, both hemispheres 357.7
2132 Female, age 85, both hemispheres 325.2
2182 Male, age 80, both hemispheres 296.1
2277 Male, age 76, both hemispheres 264.2
2461 Male, age 61, both hemispheres 224.6
Motor trigeminal nucleus
nTPM: 277.2
2309 Male, age 76, both hemispheres 328.9
2335 Male, age 61, both hemispheres 301.7
2079 Male, age 80, both hemispheres 263.6
2560 Male, age 74, both hemispheres 257.7
2321 Female, age 91, both hemispheres 234.1
Nuclei of the trapezoid body
nTPM: 294.8
1983 Male, age 76, both hemispheres 358.6
2735 Female, age 85, both hemispheres 306.3
2159 Male, age 61, both hemispheres 277.0
2166 Male, age 80, both hemispheres 273.6
2368 Female, age 91, both hemispheres 258.6
Nucleus ambiguus
nTPM: 350.9
2071 Male, age 76, both hemispheres 460.4
2096 Female, age 85, both hemispheres 241.5
Nucleus cuneatus
nTPM: 284.6
2380 Male, age 80, both hemispheres 389.2
2564 Male, age 74, both hemispheres 351.8
2808 Female, age 85, both hemispheres 341.8
2376 Male, age 61, both hemispheres 293.3
2381 Male, age 80, both hemispheres 280.0
2100 Male, age 76, both hemispheres 260.8
2562 Male, age 61, both hemispheres 230.6
2131 Male, age 76, both hemispheres 225.4
2805 Female, age 91, both hemispheres 188.5
Nucleus gracilis
nTPM: 326.9
2627 Male, age 74, both hemispheres 409.3
2382 Male, age 80, both hemispheres 312.1
2299 Female, age 85, both hemispheres 259.3
Nucleus raphe magnus
nTPM: 281.8
2455 Male, age 74, both hemispheres 337.6
2160 Male, age 61, both hemispheres 319.0
2051 Male, age 76, both hemispheres 318.5
2328 Male, age 80, both hemispheres 256.1
2459 Female, age 91, both hemispheres 233.7
2172 Female, age 85, both hemispheres 225.7
Nucleus raphe obscurus
nTPM: 394.7
2845 Female, age 85, midline 431.0
2142 Male, age 76, midline 404.3
2800 Male, age 61, midline 348.7
Nucleus raphe pallidus
nTPM: 463.1
1924 Male, age 61, midline 593.2
2145 Male, age 76, midline 408.5
2183 Male, age 80, midline 387.6
Nucleus tractus solitarii
nTPM: 294.0
2144 Female, age 91, right hemisphere 444.2
2656 Male, age 76, both hemispheres 278.6
2191 Female, age 85, both hemispheres 263.9
2307 Male, age 80, both hemispheres 189.3
Paramedian reticular nucleus
nTPM: 356.0
2057 Male, age 80, both hemispheres 397.7
2052 Male, age 76, both hemispheres 350.6
2050 Female, age 85, both hemispheres 346.5
2313 Male, age 61, both hemispheres 329.2
Parvicellular reticular nuclei
nTPM: 316.0
2119 Male, age 80, both hemispheres 400.3
2095 Male, age 76, both hemispheres 361.8
2558 Male, age 74, both hemispheres 186.1
Parvicellular reticular nuclei, medullary
nTPM: 325.8
2091 Female, age 85, both hemispheres 362.7
2189 Female, age 91, both hemispheres 342.0
2181 Male, age 80, left hemisphere 272.7
Pedunculopontine tegmental nucleus
nTPM: 366.5
2334 Male, age 80, both hemispheres 383.3
2338 Male, age 61, both hemispheres 361.5
1921 Female, age 85, both hemispheres 354.7
Peritrigeminal nucleus
nTPM: 391.4
2067 Female, age 85, both hemispheres 460.9
2136 Male, age 76, both hemispheres 384.3
2179 Male, age 61, both hemispheres 329.1
Pontine nuclei
nTPM: 314.6
1863 Male, age 55, unknown 373.7
2109 Female, age 72, unknown 352.2
2454 Male, age 74, left hemisphere 335.9
2727 Male, age 61, right hemisphere 315.0
1968 Male, age 76, left hemisphere 306.8
2115 Male, age 80, left hemisphere 296.6
2319 Female, age 91, both hemispheres 276.7
2787 Female, age 85, both hemispheres 259.8
Pontine raphe nucleus
nTPM: 339.1
2853 Male, age 76, midline 360.8
2122 Female, age 85, midline 317.4
Posteroventral cochlear nucleus
nTPM: 342.1
2341 Male, age 80, both hemispheres 373.1
2752 Female, age 85, both hemispheres 359.2
2070 Male, age 76, both hemispheres 334.5
2371 Male, age 61, both hemispheres 330.0
2135 Female, age 91, both hemispheres 313.9
Prepositus hypoglossal nucleus
nTPM: 388.8
2855 Female, age 85, right hemisphere 431.8
2086 Male, age 80, both hemispheres 345.7
Principal sensory trigeminal nucleus
nTPM: 299.9
2324 Male, age 76, both hemispheres 350.4
2158 Male, age 61, both hemispheres 301.1
2008 Male, age 80, left hemisphere 283.1
2367 Female, age 91, left hemisphere 264.7
Reticular pontine nucleus, caudal
nTPM: 279.5
2092 Male, age 76, both hemispheres 365.0
2559 Male, age 74, both hemispheres 302.9
2457 Female, age 91, both hemispheres 239.4
2332 Male, age 80, right hemisphere 210.7
Reticular pontine nucleus, oral
nTPM: 352.5
1939 Male, age 80, both hemispheres 404.6
2361 Male, age 74, both hemispheres 396.1
2167 Male, age 76, both hemispheres 357.7
2012 Female, age 85, both hemispheres 354.8
2366 Female, age 91, both hemispheres 249.2
Reticulotegmental nucleus
nTPM: 291.9
2325 Male, age 76, both hemispheres 324.5
2333 Male, age 80, both hemispheres 302.7
2322 Female, age 91, both hemispheres 283.7
2452 Male, age 74, both hemispheres 256.9
Spinal trigeminal nucleus, caudal
nTPM: 290.5
2390 Female, age 91, both hemispheres 330.7
2312 Male, age 61, both hemispheres 298.2
2308 Male, age 80, both hemispheres 286.6
2447 Male, age 76, both hemispheres 282.4
2642 Male, age 74, both hemispheres 254.6
Spinal trigeminal nucleus, interpolar
nTPM: 331.4
2066 Male, age 76, right hemisphere 385.6
2625 Male, age 61, both hemispheres 358.7
2033 Male, age 80, both hemispheres 326.2
2386 Female, age 85, both hemispheres 303.2
2389 Female, age 91, both hemispheres 283.3
Spinal trigeminal nucleus, oral
nTPM: 302.6
2737 Female, age 85, both hemispheres 318.6
2164 Male, age 80, both hemispheres 298.3
1978 Male, age 76, both hemispheres 290.8
Spinal vestibular nucleus
nTPM: 332.3
2806 Female, age 85, both hemispheres 387.7
2748 Male, age 76, both hemispheres 369.9
2186 Female, age 91, both hemispheres 335.5
2780 Male, age 80, both hemispheres 329.2
2384 Male, age 74, both hemispheres 300.4
2796 Male, age 61, both hemispheres 271.2
Subcoeruleus area
nTPM: 330.8
2369 Female, age 85, left hemisphere 438.0
1958 Male, age 80, both hemispheres 341.0
2451 Male, age 74, both hemispheres 302.2
2323 Female, age 91, left hemisphere 301.7
2089 Male, age 76, left hemisphere 271.0
Superior olive
nTPM: 314.2
2364 Male, age 74, right hemisphere 467.4
1875 Female, age 85, both hemispheres 326.2
2020 Male, age 76, both hemispheres 320.8
2329 Male, age 80, right hemisphere 243.2
2561 Female, age 91, both hemispheres 213.2
Superior vestibular nucleus
nTPM: 446.7
2383 Male, age 74, both hemispheres 546.9
2061 Male, age 76, both hemispheres 402.8
2015 Male, age 80, both hemispheres 390.3
Ventral medullary reticular nucleus
nTPM: 311.4
2372 Male, age 61, both hemispheres 313.3
2060 Male, age 76, both hemispheres 309.6
Ventral periolivary nuclei
nTPM: 287.6
2023 Male, age 76, both hemispheres 362.3
2130 Female, age 85, both hemispheres 304.1
2165 Male, age 80, both hemispheres 282.9
2794 Female, age 91, left hemisphere 201.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 350.7
1986 Male, age 76, both hemispheres 384.1
2741 Female, age 85, both hemispheres 360.5
2180 Male, age 61, both hemispheres 344.2
2118 Male, age 80, both hemispheres 338.0
2302 Female, age 91, both hemispheres 326.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 307.3
2359 Male, age 61, both hemispheres 390.2
2840 Female, age 85, both hemispheres 314.0
1959 Male, age 76, both hemispheres 306.7
2161 Male, age 80, both hemispheres 285.1
2449 Male, age 74, both hemispheres 281.9
2456 Female, age 91, both hemispheres 266.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 633.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 633.7
FF:10182-103D2 60 years, female 636.2
FF:10165-103B3 76 years, female 631.3
Medulla oblongata
Scaled Tags Per Million: 546.8
FF:10174-103C3 60 years, female 666.7
FF:10038-101F2 18-64 years, mixed 500.0
FF:10155-103A2 76 years, female 473.6
Pons
Scaled Tags Per Million: 467.9
FF:10033-101E6 18-54 years, mixed 467.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 167.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 167.9
Samples: 4

Max nTPM: 244.1
Min nTPM: 118.4
Sample A Female 118.4
Sample B Female 138.3
Sample C Male 170.7
Sample D Male 244.1
Pons
nTPM: 128.2
Samples: 4

Max nTPM: 160.2
Min nTPM: 88.6
Sample A Female 88.6
Sample B Female 108.6
Sample C Male 155.2
Sample D Male 160.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 515.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 515.5
Samples: 4

Max nTPM: 557.0
Min nTPM: 485.9
Sample A Male 485.9
Sample B Male 511.4
Sample C Female 507.7
Sample D Female 557.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.2
836 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 7.0
837 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 3.4
70795736 Antisense, RP_050712_01_H04, Mouse strain C57BL/6J (56 days, male) 1.4
Pons
Expression energy: 4.8
836 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 8.9
837 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 2.9
70795736 Antisense, RP_050712_01_H04, Mouse strain C57BL/6J (56 days, male) 0.8

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