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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:363.7 nTPM
GTEx:363.7 nTPM
FANTOM5:421.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB004682
Squamous epithelial cells Not detected



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

363.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 363.7
Samples: 156

Max nTPM: 1028.8
Min nTPM: 130.9
Std nTPM: 172.6
Median nTPM: 315.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 1028.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 919.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 803.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 789.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 764.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 758.8
GTEX-S341-1226-SM-4AD5S 40-49 years, female 739.9
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 717.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 696.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 693.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 690.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 653.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 645.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 621.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 611.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 597.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 594.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 581.6
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 576.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 572.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 568.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 560.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 557.9
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 554.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 544.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 542.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 539.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 538.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 524.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 521.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 519.1
GTEX-1C475-0526-SM-793AC 40-49 years, female 514.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 503.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 503.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 502.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 478.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 477.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 476.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 473.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 462.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 458.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 454.2
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 447.1
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 438.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 436.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 434.1
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 431.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 425.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 410.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 408.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 400.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 392.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 385.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 384.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 379.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 376.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 368.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 362.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 355.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 352.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 350.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 347.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 347.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 345.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 342.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 342.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 335.7
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 335.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 335.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 334.0
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 330.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 327.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 319.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 317.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 317.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 316.4
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 316.1
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 315.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 315.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 314.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 312.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 308.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 308.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 307.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 305.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 303.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 300.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 300.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 298.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 293.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 292.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 290.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 288.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 286.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 277.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 276.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 273.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 272.7
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 270.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 265.4
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 265.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 264.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 263.4
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 260.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 257.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 257.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 256.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 255.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 253.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 252.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 252.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 248.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 246.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 246.7
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 242.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 242.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 239.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 232.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 232.0
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 228.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 226.2
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 224.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 224.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 222.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 219.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 217.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 215.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 212.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 209.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 206.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 204.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 202.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 202.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 201.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 201.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 198.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 197.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 193.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 192.4
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 188.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 187.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 181.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 180.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 177.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 174.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 173.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 171.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 166.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 164.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 157.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 157.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 156.8
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 154.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 150.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 132.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 130.9
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

421.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 421.8
FF:10204-103F6 68 years, female 421.8

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