We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CLU
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CLU
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:716.7 nTPM
GTEx:716.7 nTPM
FANTOM5:1826.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000572Antibody CAB016253Antibody CAB080180
Squamous epithelial cells Not detectedNot detectedMedium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

716.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 716.7
Samples: 156

Max nTPM: 3933.2
Min nTPM: 82.5
Std nTPM: 555.4
Median nTPM: 587.1
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 3933.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 2728.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 2311.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 2144.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1886.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1836.7
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1815.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1774.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1759.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1754.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1663.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1595.2
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1541.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1532.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1497.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1434.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1432.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1397.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1363.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1271.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1224.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1205.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 1153.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1153.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1121.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1110.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1108.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1098.1
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1091.0
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1052.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1042.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1039.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1033.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1026.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1024.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1020.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1018.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1008.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 956.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 948.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 943.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 914.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 906.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 898.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 890.6
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 877.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 852.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 840.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 836.2
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 804.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 791.3
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 782.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 776.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 771.1
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 756.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 754.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 748.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 734.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 732.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 721.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 712.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 711.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 693.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 685.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 673.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 663.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 660.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 658.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 656.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 652.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 620.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 620.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 616.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 609.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 597.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 597.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 592.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 592.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 582.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 572.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 568.3
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 560.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 560.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 550.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 539.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 523.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 514.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 511.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 501.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 499.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 487.2
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 472.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 471.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 463.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 461.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 460.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 457.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 444.7
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 444.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 413.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 409.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 401.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 397.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 394.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 393.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 389.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 386.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 384.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 380.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 380.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 378.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 373.8
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 372.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 371.2
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 370.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 361.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 329.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 320.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 316.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 315.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 308.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 308.4
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 301.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 291.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 289.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 271.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 263.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 258.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 256.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 244.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 241.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 238.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 235.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 234.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 233.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 230.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 213.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 213.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 205.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 202.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 202.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 190.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 183.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 171.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 167.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 153.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 136.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 130.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 130.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 128.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 127.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 121.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 108.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 102.3
GTEX-11I78-2026-SM-5987C 50-59 years, female 88.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 82.5
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1826.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1826.6
FF:10204-103F6 68 years, female 1826.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org