HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:3192.0 nTPM
HPA Brain:2928.5 nTPM
GTEx:3192.0 nTPM
FANTOM5:1961.7 Scaled Tags Per Million
Pig:2460.4 nTPM
Mouse:2195.0 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004128
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 2928.5
Sample id Sample description nTPM
Hippocampus
nTPM: 2008.9
1911 Female, age 85, right hemisphere 2521.7
2621 Female, age 67, right hemisphere 2274.3
2529 Female, age 94, left hemisphere 2220.4
1898 Male, age 80, left hemisphere 2043.3
1855 Male, age 76, left hemisphere 1578.3
2148 Female, age 91, left hemisphere 1415.3
Dentate gyrus
nTPM: 2153.1
2530 Female, age 94, left hemisphere 4483.8
2010 Male, age 76, both hemispheres 2220.3
2528 Male, age 74, both hemispheres 2144.0
2531 Female, age 67, both hemispheres 1512.9
2246 Female, age 85, both hemispheres 1486.8
1927 Female, age 91, both hemispheres 1071.1
Entorhinal gyrus
nTPM: 2143.5
2117 Female, age 91, right hemisphere 4384.1
2764 Male, age 80, right hemisphere 2497.6
2686 Male, age 75, right hemisphere 1723.4
1938 Female, age 85, left hemisphere 1697.4
2613 Female, age 94, left hemisphere 1319.2
1787 Male, age 76, left hemisphere 1239.5
Hippocampus, CA1
nTPM: 1405.5
2527 Male, age 74, both hemispheres 2083.9
1873 Female, age 85, both hemispheres 1686.8
2082 Female, age 91, right hemisphere 1494.1
2749 Male, age 80, left hemisphere 1347.3
2045 Male, age 76, both hemispheres 415.2
Hippocampus, CA2
nTPM: 2130.7
2249 Male, age 74, both hemispheres 2981.5
1963 Male, age 80, left hemisphere 2948.3
2437 Female, age 94, left hemisphere 2203.8
1940 Female, age 85, left hemisphere 1937.6
2113 Female, age 91, right hemisphere 1725.1
1892 Male, age 76, both hemispheres 987.6
Hippocampus, CA3
nTPM: 1255.8
1891 Female, age 85, both hemispheres 2864.2
2436 Male, age 74, both hemispheres 1459.9
1867 Male, age 76, both hemispheres 1330.1
2137 Male, age 80, left hemisphere 714.2
2620 Female, age 94, left hemisphere 607.3
2861 Female, age 67, both hemispheres 559.3
Parahippocampal cortex
nTPM: 1435.7
2532 Female, age 72, left hemisphere 2478.8
2692 Male, age 74, both hemispheres 1865.2
1990 Female, age 91, right hemisphere 1846.5
1850 Male, age 80, both hemispheres 1635.1
1933 Female, age 85, both hemispheres 1418.0
2018 Male, age 76, both hemispheres 1399.0
2245 Female, age 91, both hemispheres 1381.6
2250 Female, age 67, right hemisphere 925.5
2693 Female, age 94, both hemispheres 891.9
2622 Female, age 67, right hemisphere 514.9
Perirhinal gyrus
nTPM: 840.2
2521 Female, age 94, right hemisphere 929.2
1794 Male, age 80, right hemisphere 903.4
2848 Male, age 76, right hemisphere 873.6
1847 Female, age 91, left hemisphere 800.8
1841 Female, age 85, right hemisphere 693.7
Subiculum
nTPM: 2928.5
2042 Male, age 76, both hemispheres 4509.1
1901 Male, age 80, both hemispheres 3749.7
1977 Female, age 85, both hemispheres 2722.4
2438 Female, age 94, left hemisphere 2511.7
2619 Male, age 74, both hemispheres 2107.6
2729 Female, age 91, right hemisphere 1970.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3192.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3192.0
Samples: 197

Max nTPM: 9499.9
Min nTPM: 45.4
Std nTPM: 1899.3
Median nTPM: 2607.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 9499.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 8920.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 8214.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 8169.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 7648.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 7364.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 7342.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 6941.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 6725.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 6676.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 6676.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1961.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1961.7
FF:10153-102I9 76 years, female 2526.6
FF:10169-103B7 60 years, female 1396.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 2460.4
Pig sample Sample description nTPM
Subiculum
nTPM: 722.6
Samples: 4

Max nTPM: 915.9
Min nTPM: 490.3
Sample A Female 691.2
Sample B Female 915.9
Sample C Male 490.3
Sample D Male 793.0
Dorsal hippocampus
nTPM: 2460.4
Samples: 4

Max nTPM: 3904.6
Min nTPM: 678.5
Sample A Female 3904.6
Sample B Female 1661.1
Sample C Male 3597.5
Sample D Male 678.5
Entorhinal cortex
nTPM: 629.0
Samples: 4

Max nTPM: 1036.0
Min nTPM: 398.1
Sample A Female 403.4
Sample B Female 1036.0
Sample C Male 398.1
Sample D Male 678.5
Ventral hippocampus
nTPM: 1338.1
Samples: 4

Max nTPM: 2201.0
Min nTPM: 548.2
Sample A Female 1599.3
Sample B Female 548.2
Sample C Male 1003.7
Sample D Male 2201.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2195.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1013.5
Samples: 4

Max nTPM: 1401.9
Min nTPM: 450.6
Sample A Male 1401.9
Sample B Male 1033.5
Sample C Female 1167.9
Sample D Female 450.6
Hippocampal formation
nTPM: 2195.1
Samples: 4

Max nTPM: 3407.1
Min nTPM: 1494.0
Sample A Male 1494.0
Sample B Male 1695.9
Sample C Female 3407.1
Sample D Female 2183.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
75496147 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 15.9
75457514 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 15.5
75496510 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 15.5
75496148 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 15.4
75496146 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 14.6
69117382 Antisense, RP_050330_01_A05, Mouse strain C57BL/6J (56 days, male) 14.5
75457513 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 14.4
75496500 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 14.4
75496145 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 14.3

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