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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
972.4
nTPM
FANTOM5:
4515.3
Scaled Tags Per Million
Pig:
0.1
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
972.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 461.0
1984
Male, age 76, both hemispheres
552.0
2188
Female, age 91, both hemispheres
456.5
2301
Female, age 85, both hemispheres
439.9
2090
Male, age 80, both hemispheres
395.7
Dorsal cochlear nucleus nTPM: 746.2
2802
Male, age 74, right hemisphere
888.4
2370
Male, age 61, both hemispheres
869.3
2058
Male, age 76, both hemispheres
744.2
2187
Female, age 91, both hemispheres
664.1
2378
Male, age 80, both hemispheres
564.8
Dorsal tegmental nucleus nTPM: 890.3
2083
Male, age 80, both hemispheres
1154.8
2358
Male, age 61, both hemispheres
1012.6
1936
Male, age 76, left hemisphere
795.4
2326
Male, age 74, both hemispheres
598.4
Dorsolateral tegmental area nTPM: 776.1
2654
Male, age 80, both hemispheres
1103.6
2337
Male, age 61, both hemispheres
922.0
2141
Male, age 76, both hemispheres
753.5
2360
Male, age 74, both hemispheres
594.5
2751
Female, age 85, both hemispheres
507.1
Kolliker-Fuse nucleus nTPM: 972.4
2163
Male, age 80, both hemispheres
1235.9
2315
Male, age 76, right hemisphere
1136.8
2793
Female, age 91, left hemisphere
544.6
Lateral lemniscal nuclei nTPM: 471.2
2036
Male, age 80, both hemispheres
559.2
2169
Male, age 76, both hemispheres
518.6
2453
Male, age 74, right hemisphere
487.2
2746
Female, age 85, left hemisphere
411.6
2320
Female, age 91, left hemisphere
379.6
Lateral parabrachial nucleus nTPM: 655.6
2792
Male, age 76, both hemispheres
1012.4
2790
Male, age 61, both hemispheres
607.8
2139
Female, age 85, right hemisphere
531.9
2013
Male, age 80, both hemispheres
470.3
Lateral vestibular nucleus nTPM: 708.2
2184
Male, age 76, both hemispheres
855.7
2311
Male, age 80, both hemispheres
560.6
Locus coeruleus nTPM: 837.0
2014
Male, age 55, unknown
1209.2
2317
Female, age 72, unknown
1134.5
2123
Female, age 91, both hemispheres
761.7
2162
Male, age 80, both hemispheres
732.3
1980
Male, age 76, both hemispheres
715.6
2720
Male, age 74, both hemispheres
687.9
2788
Male, age 74, unknown
618.2
Medial parabrachial nucleus nTPM: 677.8
2156
Male, age 61, both hemispheres
827.8
2786
Male, age 76, both hemispheres
765.7
2854
Male, age 80, both hemispheres
762.1
2170
Female, age 91, both hemispheres
697.5
2463
Female, age 85, right hemisphere
335.9
Medial periolivary nuclei nTPM: 459.9
2791
Male, age 74, right hemisphere
502.6
2458
Female, age 91, both hemispheres
472.7
2171
Female, age 85, both hemispheres
455.6
2063
Male, age 76, both hemispheres
434.6
2081
Male, age 80, both hemispheres
434.0
Motor facial nucleus nTPM: 552.8
2795
Female, age 91, both hemispheres
826.1
2126
Male, age 61, both hemispheres
606.9
2327
Male, age 80, both hemispheres
558.1
2062
Male, age 76, both hemispheres
456.0
2365
Male, age 74, right hemisphere
438.8
2697
Female, age 85, both hemispheres
430.7
Motor trigeminal nucleus nTPM: 627.8
2335
Male, age 61, both hemispheres
869.1
2309
Male, age 76, both hemispheres
709.2
2079
Male, age 80, both hemispheres
577.5
2560
Male, age 74, both hemispheres
501.7
2321
Female, age 91, both hemispheres
481.4
Nuclei of the trapezoid body nTPM: 526.3
1983
Male, age 76, both hemispheres
637.6
2368
Female, age 91, both hemispheres
582.3
2166
Male, age 80, both hemispheres
501.7
2735
Female, age 85, both hemispheres
493.2
2159
Male, age 61, both hemispheres
416.8
Nucleus raphe magnus nTPM: 541.5
2051
Male, age 76, both hemispheres
649.7
2172
Female, age 85, both hemispheres
570.3
2455
Male, age 74, both hemispheres
529.7
2459
Female, age 91, both hemispheres
523.2
2328
Male, age 80, both hemispheres
510.3
2160
Male, age 61, both hemispheres
465.5
Paramedian reticular nucleus nTPM: 642.7
2052
Male, age 76, both hemispheres
832.8
2313
Male, age 61, both hemispheres
620.2
2050
Female, age 85, both hemispheres
595.2
2057
Male, age 80, both hemispheres
522.8
Pedunculopontine tegmental nucleus nTPM: 803.4
2334
Male, age 80, both hemispheres
992.2
2338
Male, age 61, both hemispheres
874.8
1921
Female, age 85, both hemispheres
543.1
Pontine nuclei nTPM: 452.7
2787
Female, age 85, both hemispheres
761.5
2115
Male, age 80, left hemisphere
465.8
2319
Female, age 91, both hemispheres
435.8
1968
Male, age 76, left hemisphere
431.4
1863
Male, age 55, unknown
420.6
2727
Male, age 61, right hemisphere
387.9
2454
Male, age 74, left hemisphere
383.2
2109
Female, age 72, unknown
335.8
Pontine raphe nucleus nTPM: 610.4
2853
Male, age 76, midline
682.9
2122
Female, age 85, midline
538.0
Posteroventral cochlear nucleus nTPM: 596.7
2371
Male, age 61, both hemispheres
948.1
2752
Female, age 85, both hemispheres
665.2
2070
Male, age 76, both hemispheres
608.3
2135
Female, age 91, both hemispheres
386.5
2341
Male, age 80, both hemispheres
375.2
Principal sensory trigeminal nucleus nTPM: 571.0
2324
Male, age 76, both hemispheres
847.6
2008
Male, age 80, left hemisphere
507.1
2158
Male, age 61, both hemispheres
478.0
2367
Female, age 91, left hemisphere
451.2
Reticular pontine nucleus, caudal nTPM: 592.6
2332
Male, age 80, right hemisphere
708.1
2092
Male, age 76, both hemispheres
583.5
2457
Female, age 91, both hemispheres
560.8
2559
Male, age 74, both hemispheres
517.9
Reticular pontine nucleus, oral nTPM: 634.3
1939
Male, age 80, both hemispheres
1183.2
2167
Male, age 76, both hemispheres
803.0
2012
Female, age 85, both hemispheres
453.6
2366
Female, age 91, both hemispheres
405.4
2361
Male, age 74, both hemispheres
326.1
Reticulotegmental nucleus nTPM: 793.9
2333
Male, age 80, both hemispheres
1071.4
2322
Female, age 91, both hemispheres
828.3
2325
Male, age 76, both hemispheres
665.9
2452
Male, age 74, both hemispheres
610.0
Spinal trigeminal nucleus, oral nTPM: 726.3
2164
Male, age 80, both hemispheres
811.9
2737
Female, age 85, both hemispheres
762.9
1978
Male, age 76, both hemispheres
604.1
Subcoeruleus area nTPM: 629.5
2323
Female, age 91, left hemisphere
928.4
1958
Male, age 80, both hemispheres
757.8
2451
Male, age 74, both hemispheres
626.9
2369
Female, age 85, left hemisphere
440.4
2089
Male, age 76, left hemisphere
394.0
Superior olive nTPM: 486.0
2561
Female, age 91, both hemispheres
572.4
2020
Male, age 76, both hemispheres
487.4
2329
Male, age 80, right hemisphere
484.8
2364
Male, age 74, right hemisphere
452.7
1875
Female, age 85, both hemispheres
433.0
Ventral periolivary nuclei nTPM: 493.0
2165
Male, age 80, both hemispheres
590.9
2794
Female, age 91, left hemisphere
562.1
2023
Male, age 76, both hemispheres
426.7
2130
Female, age 85, both hemispheres
392.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 636.6
2359
Male, age 61, both hemispheres
927.7
2840
Female, age 85, both hemispheres
702.3
2456
Female, age 91, both hemispheres
618.2
2161
Male, age 80, both hemispheres
573.0
1959
Male, age 76, both hemispheres
541.8
2449
Male, age 74, both hemispheres
456.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
