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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:130.5 nTPM
FANTOM5:251.3 Scaled Tags Per Million
Pig:92.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB037094
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 130.5
Samples: 246

Max nTPM: 315.2
Min nTPM: 85.3
Std nTPM: 32.2
Median nTPM: 122.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 315.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 277.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 261.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 258.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 240.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 232.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 200.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 196.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 195.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 193.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 193.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 193.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 188.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 183.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 180.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 179.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 177.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 175.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 175.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 174.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 173.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 173.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 172.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 170.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 169.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 169.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 168.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 167.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 166.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 165.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 164.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 164.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 162.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 162.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 161.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 157.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 156.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 154.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 154.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 153.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 152.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 152.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 150.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 149.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 149.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 149.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 148.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 148.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 147.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 147.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 147.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 147.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 146.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 146.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 146.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 145.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 144.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 143.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 143.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 142.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 142.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 142.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 141.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 141.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 141.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 141.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 141.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 140.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 140.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 140.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 139.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 139.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 138.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 138.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 137.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 136.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 136.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 136.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 136.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 135.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 135.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 134.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 133.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 132.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 132.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 131.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 131.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 130.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 129.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 129.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 129.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 129.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 128.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 128.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 128.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 128.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 127.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 127.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 126.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 126.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 126.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 126.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 126.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 126.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 125.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 125.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 125.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 125.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 125.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 125.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 124.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 124.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 124.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 123.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 122.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 122.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 122.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 122.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 122.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 122.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 122.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 122.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 122.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 122.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 121.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 121.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 120.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 120.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 120.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 120.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 120.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 120.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 119.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 119.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 119.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 119.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 119.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 118.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 118.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 118.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 118.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 117.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 117.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 117.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 117.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 117.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 117.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 117.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 117.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 117.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 117.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 117.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 117.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 117.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 116.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 116.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 116.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 116.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 116.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 116.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 116.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 115.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 115.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 115.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 115.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 115.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 115.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 114.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 114.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 114.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 114.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 114.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 114.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 114.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 113.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 113.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 113.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 113.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 111.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 111.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 111.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 110.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 109.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 109.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 109.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 109.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 108.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 108.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 108.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 108.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 107.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 107.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 107.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 107.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 107.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 106.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 105.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 105.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 105.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 105.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 105.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 105.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 104.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 103.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 103.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 103.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 102.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 102.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 102.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 102.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 102.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 102.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 102.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 102.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 101.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 101.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 100.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 100.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 100.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 100.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 100.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 100.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 99.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 99.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 99.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 99.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 98.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 97.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 97.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 96.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 96.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 96.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 95.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 95.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 95.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 94.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 94.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 92.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 91.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 91.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 91.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 89.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 87.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 85.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

251.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 251.3
FF:10164-103B2 76 years, female 251.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.2
Pig sample Sample description nTPM
Caudate
nTPM: 92.3
Samples: 4

Max nTPM: 103.9
Min nTPM: 85.1
Sample A Female 93.8
Sample B Female 86.2
Sample C Male 103.9
Sample D Male 85.1

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