HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:307.0 nTPM
HPA Brain:413.1 nTPM
GTEx:307.0 nTPM
FANTOM5:303.2 Scaled Tags Per Million
Pig:233.7 nTPM
Mouse:393.7 nTPM
Allen mouse:23.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044617Antibody HPA052450Antibody CAB009798
Glial cells MediumHighNot detected
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 413.1
Sample id Sample description nTPM
Hippocampus
nTPM: 316.8
1898 Male, age 80, left hemisphere 400.5
1855 Male, age 76, left hemisphere 329.5
2621 Female, age 67, right hemisphere 304.7
2529 Female, age 94, left hemisphere 304.6
2148 Female, age 91, left hemisphere 303.8
1911 Female, age 85, right hemisphere 257.6
Dentate gyrus
nTPM: 329.3
2530 Female, age 94, left hemisphere 375.1
1927 Female, age 91, both hemispheres 361.5
2010 Male, age 76, both hemispheres 358.8
2246 Female, age 85, both hemispheres 307.2
2531 Female, age 67, both hemispheres 287.1
2528 Male, age 74, both hemispheres 285.9
Entorhinal gyrus
nTPM: 348.3
2764 Male, age 80, right hemisphere 426.8
1787 Male, age 76, left hemisphere 363.2
1938 Female, age 85, left hemisphere 361.9
2613 Female, age 94, left hemisphere 342.5
2686 Male, age 75, right hemisphere 324.8
2117 Female, age 91, right hemisphere 270.9
Hippocampus, CA1
nTPM: 371.0
2749 Male, age 80, left hemisphere 570.3
1873 Female, age 85, both hemispheres 353.1
2082 Female, age 91, right hemisphere 326.8
2045 Male, age 76, both hemispheres 310.5
2527 Male, age 74, both hemispheres 294.1
Hippocampus, CA2
nTPM: 343.6
1963 Male, age 80, left hemisphere 437.9
1892 Male, age 76, both hemispheres 420.2
1940 Female, age 85, left hemisphere 327.3
2437 Female, age 94, left hemisphere 301.9
2113 Female, age 91, right hemisphere 301.4
2249 Male, age 74, both hemispheres 272.7
Hippocampus, CA3
nTPM: 330.5
2137 Male, age 80, left hemisphere 453.7
1867 Male, age 76, both hemispheres 354.4
2620 Female, age 94, left hemisphere 320.0
2436 Male, age 74, both hemispheres 295.0
2861 Female, age 67, both hemispheres 284.5
1891 Female, age 85, both hemispheres 275.3
Parahippocampal cortex
nTPM: 341.2
1850 Male, age 80, both hemispheres 432.0
1990 Female, age 91, right hemisphere 363.3
1933 Female, age 85, both hemispheres 363.1
2532 Female, age 72, left hemisphere 355.5
2245 Female, age 91, both hemispheres 353.8
2693 Female, age 94, both hemispheres 343.8
2692 Male, age 74, both hemispheres 324.0
2018 Male, age 76, both hemispheres 307.7
2250 Female, age 67, right hemisphere 289.2
2622 Female, age 67, right hemisphere 279.4
Perirhinal gyrus
nTPM: 413.1
1794 Male, age 80, right hemisphere 466.9
1847 Female, age 91, left hemisphere 463.5
1841 Female, age 85, right hemisphere 399.1
2521 Female, age 94, right hemisphere 381.7
2848 Male, age 76, right hemisphere 354.2
Subiculum
nTPM: 306.0
1977 Female, age 85, both hemispheres 358.3
1901 Male, age 80, both hemispheres 341.5
2438 Female, age 94, left hemisphere 294.5
2619 Male, age 74, both hemispheres 294.2
2729 Female, age 91, right hemisphere 275.4
2042 Male, age 76, both hemispheres 272.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 307.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 307.0
Samples: 197

Max nTPM: 685.5
Min nTPM: 81.0
Std nTPM: 112.8
Median nTPM: 284.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 685.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 595.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 575.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 552.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 537.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 520.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 513.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 512.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 511.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 504.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 502.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 303.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 303.2
FF:10169-103B7 60 years, female 378.0
FF:10153-102I9 76 years, female 228.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 233.7
Pig sample Sample description nTPM
Subiculum
nTPM: 203.0
Samples: 4

Max nTPM: 254.8
Min nTPM: 183.3
Sample A Female 254.8
Sample B Female 184.1
Sample C Male 189.8
Sample D Male 183.3
Dorsal hippocampus
nTPM: 233.7
Samples: 4

Max nTPM: 289.9
Min nTPM: 194.9
Sample A Female 289.9
Sample B Female 239.2
Sample C Male 210.6
Sample D Male 194.9
Entorhinal cortex
nTPM: 228.0
Samples: 4

Max nTPM: 247.0
Min nTPM: 214.8
Sample A Female 229.8
Sample B Female 247.0
Sample C Male 220.5
Sample D Male 214.8
Ventral hippocampus
nTPM: 205.0
Samples: 4

Max nTPM: 226.1
Min nTPM: 151.2
Sample A Female 226.1
Sample B Female 151.2
Sample C Male 218.5
Sample D Male 224.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 393.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 393.7
Samples: 4

Max nTPM: 433.9
Min nTPM: 358.3
Sample A Male 380.8
Sample B Male 433.9
Sample C Female 358.3
Sample D Female 401.7
Hippocampal formation
nTPM: 388.7
Samples: 4

Max nTPM: 394.0
Min nTPM: 383.8
Sample A Male 386.4
Sample B Male 383.8
Sample C Female 390.7
Sample D Female 394.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 23.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.6
68844845 Antisense, RP_050222_02_E10, Mouse strain C57BL/6J (56 days, male) 23.6

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