PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:599.1 nTPM
FANTOM5:391.4 Scaled Tags Per Million
Pig:273.9 nTPM
Mouse:351.5 nTPM
Allen mouse:15.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 599.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 355.1
2188 Female, age 91, both hemispheres 402.4
2301 Female, age 85, both hemispheres 344.3
1984 Male, age 76, both hemispheres 342.7
2090 Male, age 80, both hemispheres 330.9
Area postrema
nTPM: 274.3
2799 Male, age 61, both hemispheres 290.6
2054 Male, age 76, both hemispheres 280.0
2306 Male, age 80, both hemispheres 252.2
Dorsal cochlear nucleus
nTPM: 330.8
2802 Male, age 74, right hemisphere 409.6
2187 Female, age 91, both hemispheres 360.1
2370 Male, age 61, both hemispheres 300.7
2058 Male, age 76, both hemispheres 298.5
2378 Male, age 80, both hemispheres 284.9
Dorsal medullary reticular nucleus
nTPM: 370.7
2040 Female, age 85, both hemispheres 464.4
2088 Male, age 76, both hemispheres 325.3
2373 Male, age 61, both hemispheres 322.5
Dorsal motor vagal complex
nTPM: 344.8
2133 Female, age 91, both hemispheres 443.0
2000 Male, age 74, unknown 420.9
2844 Male, age 55, unknown 396.3
2797 Male, age 61, both hemispheres 354.4
2643 Male, age 74, both hemispheres 332.8
2813 Female, age 72, unknown 305.2
2185 Male, age 76, both hemispheres 263.5
2807 Female, age 85, both hemispheres 242.0
Dorsal tegmental nucleus
nTPM: 328.2
2326 Male, age 74, both hemispheres 349.4
2083 Male, age 80, both hemispheres 349.1
1936 Male, age 76, left hemisphere 317.4
2358 Male, age 61, both hemispheres 296.9
Dorsolateral tegmental area
nTPM: 311.1
2654 Male, age 80, both hemispheres 349.9
2751 Female, age 85, both hemispheres 321.6
2360 Male, age 74, both hemispheres 317.2
2141 Male, age 76, both hemispheres 291.1
2337 Male, age 61, both hemispheres 275.6
Gigantocellular reticular nuclei, medullary
nTPM: 363.0
2462 Male, age 74, both hemispheres 456.5
2310 Male, age 80, both hemispheres 382.3
2387 Female, age 91, both hemispheres 368.4
2314 Male, age 61, both hemispheres 338.0
1876 Female, age 85, both hemispheres 335.9
2022 Male, age 76, right hemisphere 296.9
Gigantocellular reticular nuclei, pars
nTPM: 429.4
2168 Male, age 76, both hemispheres 605.4
2084 Female, age 85, both hemispheres 406.0
2706 Male, age 80, both hemispheres 395.1
2330 Male, age 80, both hemispheres 385.1
2336 Male, age 61, both hemispheres 355.1
Inferior olive
nTPM: 317.1
2563 Male, age 74, both hemispheres 348.8
2628 Female, age 91, both hemispheres 342.7
2085 Female, age 85, both hemispheres 307.3
2178 Male, age 61, both hemispheres 295.1
2379 Male, age 80, both hemispheres 291.6
Kolliker-Fuse nucleus
nTPM: 380.1
2163 Male, age 80, both hemispheres 455.1
2793 Female, age 91, left hemisphere 409.1
2315 Male, age 76, right hemisphere 276.0
Lateral lemniscal nuclei
nTPM: 480.0
2169 Male, age 76, both hemispheres 601.5
2746 Female, age 85, left hemisphere 504.2
2453 Male, age 74, right hemisphere 462.0
2036 Male, age 80, both hemispheres 449.5
2320 Female, age 91, left hemisphere 382.9
Lateral medullary reticular nucleus
nTPM: 359.9
2044 Male, age 76, both hemispheres 445.2
2305 Male, age 74, both hemispheres 415.1
2804 Female, age 91, both hemispheres 345.4
2852 Male, age 80, both hemispheres 332.3
2374 Male, age 61, both hemispheres 316.9
2190 Female, age 85, both hemispheres 304.5
Lateral parabrachial nucleus
nTPM: 403.7
2139 Female, age 85, right hemisphere 552.1
2790 Male, age 61, both hemispheres 388.5
2013 Male, age 80, both hemispheres 381.7
2792 Male, age 76, both hemispheres 292.6
Lateral vestibular nucleus
nTPM: 377.8
2184 Male, age 76, both hemispheres 443.4
2311 Male, age 80, both hemispheres 312.2
Locus coeruleus
nTPM: 446.3
2014 Male, age 55, unknown 542.3
2123 Female, age 91, both hemispheres 494.5
2720 Male, age 74, both hemispheres 451.4
2788 Male, age 74, unknown 440.9
2317 Female, age 72, unknown 424.6
1980 Male, age 76, both hemispheres 409.3
2162 Male, age 80, both hemispheres 360.8
Medial olivary nucleus
nTPM: 295.1
2138 Female, age 91, both hemispheres 312.9
2851 Male, age 80, both hemispheres 312.0
1962 Male, age 76, both hemispheres 280.0
1943 Male, age 61, both hemispheres 275.6
Medial parabrachial nucleus
nTPM: 359.6
2854 Male, age 80, both hemispheres 400.0
2170 Female, age 91, both hemispheres 381.5
2156 Male, age 61, both hemispheres 370.9
2786 Male, age 76, both hemispheres 322.8
2463 Female, age 85, right hemisphere 322.7
Medial periolivary nuclei
nTPM: 497.2
2171 Female, age 85, both hemispheres 698.3
2063 Male, age 76, both hemispheres 633.8
2081 Male, age 80, both hemispheres 391.5
2791 Male, age 74, right hemisphere 384.1
2458 Female, age 91, both hemispheres 378.5
Medial vestibular nucleus
nTPM: 404.2
2134 Male, age 76, both hemispheres 473.1
2801 Male, age 74, both hemispheres 414.3
2743 Female, age 85, both hemispheres 394.7
2093 Male, age 80, both hemispheres 390.2
2624 Male, age 61, both hemispheres 384.8
2803 Female, age 91, both hemispheres 368.1
Motor facial nucleus
nTPM: 461.4
2062 Male, age 76, both hemispheres 665.7
2697 Female, age 85, both hemispheres 461.2
2327 Male, age 80, both hemispheres 443.2
2365 Male, age 74, right hemisphere 420.3
2126 Male, age 61, both hemispheres 411.4
2795 Female, age 91, both hemispheres 366.6
Motor hypoglossal nucleus
nTPM: 382.4
2125 Female, age 91, both hemispheres 432.4
2132 Female, age 85, both hemispheres 425.0
2461 Male, age 61, both hemispheres 401.9
2182 Male, age 80, both hemispheres 360.2
2277 Male, age 76, both hemispheres 292.6
Motor trigeminal nucleus
nTPM: 395.6
2079 Male, age 80, both hemispheres 507.7
2560 Male, age 74, both hemispheres 420.5
2321 Female, age 91, both hemispheres 391.7
2309 Male, age 76, both hemispheres 336.8
2335 Male, age 61, both hemispheres 321.2
Nuclei of the trapezoid body
nTPM: 582.0
2159 Male, age 61, both hemispheres 766.7
2735 Female, age 85, both hemispheres 689.9
1983 Male, age 76, both hemispheres 616.1
2166 Male, age 80, both hemispheres 466.2
2368 Female, age 91, both hemispheres 371.2
Nucleus ambiguus
nTPM: 373.4
2096 Female, age 85, both hemispheres 467.2
2071 Male, age 76, both hemispheres 279.7
Nucleus cuneatus
nTPM: 352.1
2564 Male, age 74, both hemispheres 422.5
2131 Male, age 76, both hemispheres 419.0
2100 Male, age 76, both hemispheres 377.7
2805 Female, age 91, both hemispheres 372.6
2376 Male, age 61, both hemispheres 370.6
2562 Male, age 61, both hemispheres 319.6
2380 Male, age 80, both hemispheres 314.5
2381 Male, age 80, both hemispheres 312.5
2808 Female, age 85, both hemispheres 259.5
Nucleus gracilis
nTPM: 309.5
2627 Male, age 74, both hemispheres 395.0
2382 Male, age 80, both hemispheres 299.9
2299 Female, age 85, both hemispheres 233.5
Nucleus raphe magnus
nTPM: 558.8
2160 Male, age 61, both hemispheres 926.0
2172 Female, age 85, both hemispheres 674.6
2455 Male, age 74, both hemispheres 469.3
2328 Male, age 80, both hemispheres 460.3
2051 Male, age 76, both hemispheres 439.3
2459 Female, age 91, both hemispheres 383.6
Nucleus raphe obscurus
nTPM: 339.0
2800 Male, age 61, midline 390.7
2845 Female, age 85, midline 353.1
2142 Male, age 76, midline 273.2
Nucleus raphe pallidus
nTPM: 357.5
2183 Male, age 80, midline 402.8
1924 Male, age 61, midline 381.7
2145 Male, age 76, midline 287.9
Nucleus tractus solitarii
nTPM: 303.8
2144 Female, age 91, right hemisphere 370.1
2656 Male, age 76, both hemispheres 291.8
2191 Female, age 85, both hemispheres 280.8
2307 Male, age 80, both hemispheres 272.6
Paramedian reticular nucleus
nTPM: 432.1
2050 Female, age 85, both hemispheres 539.3
2057 Male, age 80, both hemispheres 457.7
2313 Male, age 61, both hemispheres 415.7
2052 Male, age 76, both hemispheres 315.5
Parvicellular reticular nuclei
nTPM: 439.3
2558 Male, age 74, both hemispheres 455.4
2095 Male, age 76, both hemispheres 443.2
2119 Male, age 80, both hemispheres 419.2
Parvicellular reticular nuclei, medullary
nTPM: 375.1
2091 Female, age 85, both hemispheres 417.5
2189 Female, age 91, both hemispheres 391.0
2181 Male, age 80, left hemisphere 316.7
Pedunculopontine tegmental nucleus
nTPM: 341.7
2338 Male, age 61, both hemispheres 348.2
2334 Male, age 80, both hemispheres 345.7
1921 Female, age 85, both hemispheres 331.2
Peritrigeminal nucleus
nTPM: 423.4
2179 Male, age 61, both hemispheres 462.5
2136 Male, age 76, both hemispheres 422.8
2067 Female, age 85, both hemispheres 384.9
Pontine nuclei
nTPM: 599.1
2727 Male, age 61, right hemisphere 894.2
1863 Male, age 55, unknown 745.1
2787 Female, age 85, both hemispheres 710.1
2109 Female, age 72, unknown 617.5
1968 Male, age 76, left hemisphere 594.7
2115 Male, age 80, left hemisphere 427.1
2454 Male, age 74, left hemisphere 423.2
2319 Female, age 91, both hemispheres 380.5
Pontine raphe nucleus
nTPM: 434.8
2122 Female, age 85, midline 555.3
2853 Male, age 76, midline 314.3
Posteroventral cochlear nucleus
nTPM: 364.8
2135 Female, age 91, both hemispheres 411.0
2752 Female, age 85, both hemispheres 410.8
2341 Male, age 80, both hemispheres 341.6
2070 Male, age 76, both hemispheres 341.2
2371 Male, age 61, both hemispheres 319.5
Prepositus hypoglossal nucleus
nTPM: 357.1
2855 Female, age 85, right hemisphere 404.7
2086 Male, age 80, both hemispheres 309.5
Principal sensory trigeminal nucleus
nTPM: 526.0
2158 Male, age 61, both hemispheres 780.1
2008 Male, age 80, left hemisphere 560.6
2324 Male, age 76, both hemispheres 385.4
2367 Female, age 91, left hemisphere 378.1
Reticular pontine nucleus, caudal
nTPM: 443.7
2092 Male, age 76, both hemispheres 482.5
2332 Male, age 80, right hemisphere 478.2
2559 Male, age 74, both hemispheres 424.5
2457 Female, age 91, both hemispheres 389.6
Reticular pontine nucleus, oral
nTPM: 395.7
2012 Female, age 85, both hemispheres 499.5
2361 Male, age 74, both hemispheres 488.4
2366 Female, age 91, both hemispheres 371.0
1939 Male, age 80, both hemispheres 324.0
2167 Male, age 76, both hemispheres 295.4
Reticulotegmental nucleus
nTPM: 405.5
2325 Male, age 76, both hemispheres 458.9
2452 Male, age 74, both hemispheres 426.0
2333 Male, age 80, both hemispheres 375.1
2322 Female, age 91, both hemispheres 362.0
Spinal trigeminal nucleus, caudal
nTPM: 376.8
2390 Female, age 91, both hemispheres 518.4
2447 Male, age 76, both hemispheres 390.4
2642 Male, age 74, both hemispheres 356.6
2308 Male, age 80, both hemispheres 314.0
2312 Male, age 61, both hemispheres 304.7
Spinal trigeminal nucleus, interpolar
nTPM: 449.9
2625 Male, age 61, both hemispheres 605.9
2066 Male, age 76, right hemisphere 566.2
2389 Female, age 91, both hemispheres 384.2
2033 Male, age 80, both hemispheres 376.7
2386 Female, age 85, both hemispheres 316.6
Spinal trigeminal nucleus, oral
nTPM: 368.3
2164 Male, age 80, both hemispheres 411.3
2737 Female, age 85, both hemispheres 400.5
1978 Male, age 76, both hemispheres 293.2
Spinal vestibular nucleus
nTPM: 369.7
2384 Male, age 74, both hemispheres 460.5
2780 Male, age 80, both hemispheres 372.6
2186 Female, age 91, both hemispheres 372.4
2748 Male, age 76, both hemispheres 348.9
2806 Female, age 85, both hemispheres 340.5
2796 Male, age 61, both hemispheres 323.0
Subcoeruleus area
nTPM: 385.9
2089 Male, age 76, left hemisphere 492.1
1958 Male, age 80, both hemispheres 428.3
2451 Male, age 74, both hemispheres 366.7
2323 Female, age 91, left hemisphere 342.6
2369 Female, age 85, left hemisphere 299.6
Superior olive
nTPM: 459.8
1875 Female, age 85, both hemispheres 615.8
2020 Male, age 76, both hemispheres 490.1
2329 Male, age 80, right hemisphere 429.4
2364 Male, age 74, right hemisphere 384.7
2561 Female, age 91, both hemispheres 378.8
Superior vestibular nucleus
nTPM: 321.0
2015 Male, age 80, both hemispheres 348.5
2061 Male, age 76, both hemispheres 308.5
2383 Male, age 74, both hemispheres 306.0
Ventral medullary reticular nucleus
nTPM: 345.6
2372 Male, age 61, both hemispheres 345.9
2060 Male, age 76, both hemispheres 345.3
Ventral periolivary nuclei
nTPM: 494.5
2130 Female, age 85, both hemispheres 580.0
2165 Male, age 80, both hemispheres 539.3
2023 Male, age 76, both hemispheres 442.1
2794 Female, age 91, left hemisphere 416.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 380.2
1986 Male, age 76, both hemispheres 451.1
2741 Female, age 85, both hemispheres 415.4
2180 Male, age 61, both hemispheres 355.1
2302 Female, age 91, both hemispheres 339.8
2118 Male, age 80, both hemispheres 339.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 404.9
1959 Male, age 76, both hemispheres 474.8
2449 Male, age 74, both hemispheres 435.4
2161 Male, age 80, both hemispheres 424.9
2840 Female, age 85, both hemispheres 402.8
2456 Female, age 91, both hemispheres 358.2
2359 Male, age 61, both hemispheres 333.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 391.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 320.1
FF:10182-103D2 60 years, female 381.5
FF:10165-103B3 76 years, female 258.8
Medulla oblongata
Scaled Tags Per Million: 242.6
FF:10174-103C3 60 years, female 273.0
FF:10038-101F2 18-64 years, mixed 238.8
FF:10155-103A2 76 years, female 216.1
Pons
Scaled Tags Per Million: 391.4
FF:10033-101E6 18-54 years, mixed 391.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 273.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 216.4
Samples: 4

Max nTPM: 242.5
Min nTPM: 180.1
Sample A Female 223.2
Sample B Female 219.6
Sample C Male 242.5
Sample D Male 180.1
Pons
nTPM: 274.0
Samples: 4

Max nTPM: 322.8
Min nTPM: 201.4
Sample A Female 313.2
Sample B Female 201.4
Sample C Male 258.4
Sample D Male 322.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 351.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 351.5
Samples: 4

Max nTPM: 366.4
Min nTPM: 337.9
Sample A Male 359.9
Sample B Male 341.9
Sample C Female 366.4
Sample D Female 337.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 15.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 15.2
68844845 Antisense, RP_050222_02_E10, Mouse strain C57BL/6J (56 days, male) 15.2
Pons
Expression energy: 15.9
68844845 Antisense, RP_050222_02_E10, Mouse strain C57BL/6J (56 days, male) 15.9

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