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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:65.3 nTPM
HPA Brain:72.1 nTPM
GTEx:65.3 nTPM
FANTOM5:970.3 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:2.3 nTPM
Allen mouse:0.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006009
Glial cells Low
Neuronal cells High


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 70.2
1781 Male, age 74, unknown 252.6
1854 Male, age 80, left hemisphere 71.0
2289 Male, age 61, right hemisphere 61.5
2846 Female, age 79, unknown 50.3
2481 Female, age 94, left hemisphere 47.6
2290 Female, age 72, unknown 34.4
1857 Female, age 85, left hemisphere 32.5
2288 Male, age 75, left hemisphere 11.9
Globus pallidus, externus
nTPM: 60.1
1996 Male, age 80, right hemisphere 73.9
2567 Female, age 72, unknown 68.6
2395 Male, age 75, both hemispheres 57.8
2772 Female, age 79, unknown 55.0
2646 Male, age 61, right hemisphere 45.3
Globus pallidus, internus
nTPM: 72.1
2111 Female, age 85, right hemisphere 105.8
2566 Female, age 72, unknown 91.4
2037 Male, age 80, right hemisphere 86.6
2778 Female, age 91, both hemispheres 69.5
1818 Male, age 74, unknown 67.2
2483 Female, age 94, right hemisphere 45.5
2287 Male, age 75, right hemisphere 38.7
Nucleus accumbens
nTPM: 38.4
2732 Male, age 80, right hemisphere 87.5
1783 Male, age 74, unknown 51.4
2698 Female, age 72, unknown 43.7
2391 Female, age 94, left hemisphere 36.9
1806 Female, age 85, left hemisphere 31.8
1856 Female, age 91, right hemisphere 27.2
2824 Male, age 61, right hemisphere 16.6
2286 Male, age 75, left hemisphere 12.0
Nucleus basalis of Meynert
nTPM: 55.4
2393 Male, age 80, right hemisphere 64.8
2569 Male, age 61, both hemispheres 54.4
2484 Female, age 94, left hemisphere 52.4
2821 Male, age 75, both hemispheres 49.9
Nucleus of the diagonal band
nTPM: 45.2
1812 Female, age 91, both hemispheres 89.7
1979 Male, age 74, unknown 38.4
2029 Male, age 61, right hemisphere 36.7
2775 Male, age 80, right hemisphere 36.4
2195 Female, age 85, both hemispheres 25.0
Putamen
nTPM: 44.5
2489 Female, age 72, unknown 68.1
2482 Female, age 94, left hemisphere 53.4
2647 Male, age 75, left hemisphere 41.5
1829 Male, age 74, unknown 39.8
2466 Female, age 79, unknown 38.1
1838 Male, age 80, right hemisphere 36.7
1937 Female, age 91, right hemisphere 33.8
Septal nuclei
nTPM: 54.8
2199 Male, age 80, right hemisphere 101.1
2394 Male, age 61, left hemisphere 84.0
2009 Female, age 91, both hemispheres 68.7
2059 Female, age 85, both hemispheres 43.1
2629 Female, age 94, right hemisphere 40.8
2031 Female, age 72, unknown 27.1
1960 Male, age 74, unknown 19.0
Stria terminalis, bed nucleus
nTPM: 23.8
1974 Female, age 91, both hemispheres 29.9
2201 Male, age 74, unknown 21.2
2486 Female, age 94, both hemispheres 20.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 65.3
Samples: 246

Max nTPM: 396.0
Min nTPM: 4.8
Std nTPM: 64.9
Median nTPM: 42.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 396.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 382.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 323.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 306.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 304.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 260.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 228.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 219.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 219.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 217.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 210.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 194.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 191.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 188.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 186.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 183.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 183.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 181.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 180.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 171.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 162.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 162.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 159.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 151.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 150.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 146.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 143.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 141.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 138.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 136.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 129.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 124.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 123.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 115.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 112.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 109.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 109.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 108.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 106.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 105.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 103.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 100.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 99.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 99.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 98.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 98.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 97.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 96.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 93.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 92.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 92.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 90.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 88.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 88.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 88.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 87.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 87.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 87.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 86.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 86.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 85.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 84.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 82.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 82.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 82.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 82.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 78.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 78.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 78.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 77.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 77.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 77.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 77.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 76.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 75.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 74.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 73.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 72.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 71.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 71.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 70.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 70.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 69.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 68.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 68.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 68.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 67.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 66.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 65.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 65.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 65.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 65.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 64.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 64.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 63.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 63.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 63.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 61.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 60.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 60.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 59.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 59.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 57.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 56.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 56.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 55.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 55.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 51.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 51.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 48.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 48.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 48.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 47.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 46.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 45.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 45.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 45.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 44.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 44.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 43.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 43.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 42.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 42.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 42.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 40.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 40.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 40.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 39.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 38.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 38.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 38.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 38.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 37.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 37.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 37.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 36.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 36.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 36.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 36.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 35.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 35.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 35.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 35.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 35.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 35.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 32.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 31.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 31.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 31.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 31.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 31.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 31.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 29.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 29.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 29.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 28.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 28.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 28.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 28.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 28.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 27.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 27.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 27.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 27.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 26.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 25.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 25.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 25.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 25.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 25.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 25.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 25.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 24.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 24.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 24.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 24.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 23.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 23.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 23.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 23.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 22.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 22.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 22.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 21.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 21.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 21.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 21.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 21.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 21.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 21.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 20.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 20.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 20.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 18.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 18.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 18.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 18.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 17.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 17.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 17.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 17.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 16.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 16.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 16.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 16.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 15.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 15.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 15.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 15.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 15.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 15.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 15.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 15.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 15.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 14.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 14.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 14.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 13.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 13.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 13.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 12.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 12.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 12.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 11.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 11.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 11.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 11.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 11.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 10.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 10.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 10.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 10.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 10.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 9.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 9.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 9.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 9.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 9.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 8.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 8.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 7.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 7.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 5.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 5.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 4.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 53.4
Samples: 246

Max nTPM: 589.3
Min nTPM: 3.6
Std nTPM: 64.3
Median nTPM: 31.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 589.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 302.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 300.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 283.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 267.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 245.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 237.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 207.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 183.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 183.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 180.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 179.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 164.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 161.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 159.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 158.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 153.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 152.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 151.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 149.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 139.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 139.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 137.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 131.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 131.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 126.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 124.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 121.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 115.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 110.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 110.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 106.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 104.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 103.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 102.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 101.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 101.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 100.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 98.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 96.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 91.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 87.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 84.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 83.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 81.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 81.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 77.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 77.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 76.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 73.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 72.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 72.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 71.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 69.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 67.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 66.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 64.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 64.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 63.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 61.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 60.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 60.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 58.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 58.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 56.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 54.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 54.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 53.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 53.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 51.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 50.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 50.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 50.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 50.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 50.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 49.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 48.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 48.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 48.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 47.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 46.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 45.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 44.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 44.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 44.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 44.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 43.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 43.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 43.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 43.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 42.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 42.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 42.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 41.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 40.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 40.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 40.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 39.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 39.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 39.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 39.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 39.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 39.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 38.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 38.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 37.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 37.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 37.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 36.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 36.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 36.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 36.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 36.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 35.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 35.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 34.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 34.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 33.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 32.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 32.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 32.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 31.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 31.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 31.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 31.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 31.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 30.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 30.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 30.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 30.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 30.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 30.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 30.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 29.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 29.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 28.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 28.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 28.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 28.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 28.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 28.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 28.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 28.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 27.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 26.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 25.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 25.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 25.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 25.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 24.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 24.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 24.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 24.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 24.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 24.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 24.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 24.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 23.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 23.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 23.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 23.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 22.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 22.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 22.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 22.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 21.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 21.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 20.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 20.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 19.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 19.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 19.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 19.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 19.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 19.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 19.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 19.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 18.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 18.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 18.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 18.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 18.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 17.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 17.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 17.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 17.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 17.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 17.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 17.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 16.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 16.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 16.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 16.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 15.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 15.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 15.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 14.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 14.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 14.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 13.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 13.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 13.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 13.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 13.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 13.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 13.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 13.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 12.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 12.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 12.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 12.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 12.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 12.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 12.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 12.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 11.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 11.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 11.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 10.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 10.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 10.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 10.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 10.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 10.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 10.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 9.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 9.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 8.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 8.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 7.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 7.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 7.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 7.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 7.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 7.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 7.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 6.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 6.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 6.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 6.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 6.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 6.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 5.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 4.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 3.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 3.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 63.2
Samples: 205

Max nTPM: 343.3
Min nTPM: 7.6
Std nTPM: 58.6
Median nTPM: 43.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 343.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 335.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 272.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 236.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 232.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 229.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 224.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 217.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 211.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 195.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 179.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 170.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 168.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 162.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 159.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 158.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 152.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 150.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 146.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 146.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 145.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 132.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 124.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 122.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 120.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 118.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 118.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 115.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 113.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 110.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 107.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 107.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 107.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 106.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 102.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 100.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 99.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 98.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 97.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 94.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 93.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 92.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 92.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 92.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 91.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 88.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 88.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 88.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 86.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 85.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 82.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 82.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 80.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 80.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 78.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 77.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 76.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 76.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 75.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 74.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 74.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 74.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 74.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 72.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 70.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 70.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 69.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 69.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 68.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 67.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 66.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 66.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 65.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 65.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 64.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 61.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 60.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 60.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 59.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 58.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 58.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 58.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 58.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 58.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 57.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 56.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 56.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 56.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 55.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 55.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 55.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 55.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 54.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 54.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 53.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 53.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 53.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 50.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 46.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 45.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 45.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 44.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 43.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 43.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 43.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 43.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 42.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 42.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 41.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 40.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 40.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 40.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 39.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 39.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 38.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 38.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 36.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 35.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 34.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 34.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 34.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 33.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 33.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 33.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 33.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 32.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 32.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 32.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 31.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 31.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 30.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 30.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 30.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 29.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 29.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 29.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 28.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 28.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 26.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 26.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 25.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 25.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 24.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 24.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 24.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 23.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 23.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 23.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 22.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 22.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 21.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 21.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 21.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 20.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 20.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 20.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 20.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 19.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 19.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 19.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 19.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 19.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 18.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 18.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 17.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 17.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 17.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 16.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 15.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 15.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 15.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 15.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 15.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 15.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 15.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 14.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 14.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 14.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 14.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 14.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 13.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 13.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 12.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 12.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 11.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 11.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 10.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 10.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 10.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 10.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 10.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 10.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 9.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 9.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 8.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 8.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 8.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 8.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 8.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 8.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 7.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

970.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 232.9
FF:10164-103B2 76 years, female 232.9
Nucleus accumbens
Scaled Tags Per Million: 210.1
FF:10037-101F1 23-56 years, mixed 210.1
Putamen
Scaled Tags Per Million: 947.3
FF:10176-103C5 60 years, female 947.3
Globus pallidus
Scaled Tags Per Million: 970.3
FF:10175-103C4 60 years, female 1674.7
FF:10161-103A8 76 years, female 265.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.1
Pig sample Sample description nTPM
Caudate
nTPM: 9.7
Samples: 4

Max nTPM: 12.6
Min nTPM: 7.5
Sample A Female 9.6
Sample B Female 7.5
Sample C Male 12.6
Sample D Male 9.0
Putamen
nTPM: 7.4
Samples: 4

Max nTPM: 8.9
Min nTPM: 4.9
Sample A Female 8.9
Sample B Female 4.9
Sample C Male 7.8
Sample D Male 7.8
Septum
nTPM: 16.1
Samples: 4

Max nTPM: 26.2
Min nTPM: 8.2
Sample A Female 13.9
Sample B Female 8.2
Sample C Male 26.2
Sample D Male 16.0
Ventral pallidum
nTPM: 9.3
Samples: 4

Max nTPM: 12.8
Min nTPM: 7.1
Sample A Female 7.1
Sample B Female 9.3
Sample C Male 12.8
Sample D Male 8.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2.0
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.6
Sample A Male 2.0
Sample B Male 2.4
Sample C Female 2.0
Sample D Female 1.6
Septum
nTPM: 2.0
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.5
Sample A Male 2.1
Sample B Male 1.5
Sample C Female 2.4
Sample D Female 1.9
Ventral forebrain
nTPM: 2.3
Samples: 4

Max nTPM: 2.4
Min nTPM: 2.2
Sample A Male 2.2
Sample B Male 2.3
Sample C Female 2.4
Sample D Female 2.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.4
68445925 Antisense, RP_050113_01_B11, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.6
68445925 Antisense, RP_050113_01_B11, Mouse strain C57BL/6J (56 days, male) 0.6

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