We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ZFP36
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ZFP36
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:690.4 nTPM
GTEx:690.4 nTPM
FANTOM5:1018.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006009
Squamous epithelial cells High



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

690.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 690.4
Samples: 156

Max nTPM: 2960.1
Min nTPM: 121.3
Std nTPM: 447.0
Median nTPM: 570.1
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 2960.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 2554.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 2092.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1808.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1724.0
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1711.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1600.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1535.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1521.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1366.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1358.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1349.8
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1292.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1253.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1245.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1222.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1213.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 1189.2
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1177.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1150.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1147.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1144.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1141.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 1138.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1117.1
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1117.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1078.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1045.3
GTEX-11I78-2026-SM-5987C 50-59 years, female 1039.4
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1027.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1025.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 993.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 980.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 970.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 943.5
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 933.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 904.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 903.6
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 901.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 899.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 882.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 879.4
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 873.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 872.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 852.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 838.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 809.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 793.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 778.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 776.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 765.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 765.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 758.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 747.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 718.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 704.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 700.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 681.7
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 680.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 680.4
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 670.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 665.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 654.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 643.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 634.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 633.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 626.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 615.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 609.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 604.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 599.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 595.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 593.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 587.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 584.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 583.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 576.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 573.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 566.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 562.0
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 553.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 548.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 539.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 537.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 533.7
GTEX-16NPV-2526-SM-6M483 50-59 years, female 525.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 522.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 518.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 510.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 506.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 500.5
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 499.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 497.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 494.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 491.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 491.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 480.7
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 480.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 476.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 467.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 462.3
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 458.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 451.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 445.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 436.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 436.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 417.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 416.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 416.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 412.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 405.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 401.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 386.0
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 376.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 375.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 372.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 372.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 360.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 359.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 355.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 351.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 343.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 343.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 340.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 335.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 331.2
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 330.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 320.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 320.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 320.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 318.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 313.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 308.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 307.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 300.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 295.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 292.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 290.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 288.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 278.5
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 276.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 273.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 264.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 251.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 245.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 242.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 235.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 234.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 229.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 224.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 219.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 217.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 180.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 171.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 171.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 121.3
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1018.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1018.0
FF:10204-103F6 68 years, female 1018.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org