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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:211.1 nTPM
HPA Brain:179.0 nTPM
GTEx:211.1 nTPM
FANTOM5:301.1 Scaled Tags Per Million
Pig:100.3 nTPM
Mouse:71.6 nTPM
Allen mouse:7.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB011596
Glial cells Medium
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

179.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 127.0
2481 Female, age 94, left hemisphere 194.2
1781 Male, age 74, unknown 157.8
2289 Male, age 61, right hemisphere 141.9
2846 Female, age 79, unknown 118.2
2288 Male, age 75, left hemisphere 105.0
1854 Male, age 80, left hemisphere 102.8
2290 Female, age 72, unknown 101.8
1857 Female, age 85, left hemisphere 94.3
Globus pallidus, externus
nTPM: 174.2
2772 Female, age 79, unknown 199.5
2395 Male, age 75, both hemispheres 176.2
2567 Female, age 72, unknown 169.8
1996 Male, age 80, right hemisphere 168.5
2646 Male, age 61, right hemisphere 157.3
Globus pallidus, internus
nTPM: 179.0
2287 Male, age 75, right hemisphere 208.0
2111 Female, age 85, right hemisphere 190.6
2483 Female, age 94, right hemisphere 187.3
1818 Male, age 74, unknown 178.5
2778 Female, age 91, both hemispheres 164.7
2566 Female, age 72, unknown 163.4
2037 Male, age 80, right hemisphere 160.2
Nucleus accumbens
nTPM: 119.1
2391 Female, age 94, left hemisphere 183.7
2698 Female, age 72, unknown 125.2
2732 Male, age 80, right hemisphere 121.4
2286 Male, age 75, left hemisphere 114.9
1806 Female, age 85, left hemisphere 108.1
1783 Male, age 74, unknown 107.1
2824 Male, age 61, right hemisphere 98.7
1856 Female, age 91, right hemisphere 93.4
Nucleus basalis of Meynert
nTPM: 134.3
2569 Male, age 61, both hemispheres 158.1
2821 Male, age 75, both hemispheres 149.9
2484 Female, age 94, left hemisphere 124.8
2393 Male, age 80, right hemisphere 104.6
Nucleus of the diagonal band
nTPM: 113.4
1812 Female, age 91, both hemispheres 140.5
2775 Male, age 80, right hemisphere 119.6
1979 Male, age 74, unknown 106.7
2195 Female, age 85, both hemispheres 102.1
2029 Male, age 61, right hemisphere 98.2
Putamen
nTPM: 117.4
2482 Female, age 94, left hemisphere 175.5
2647 Male, age 75, left hemisphere 125.7
2489 Female, age 72, unknown 119.1
1829 Male, age 74, unknown 118.5
2466 Female, age 79, unknown 101.7
1937 Female, age 91, right hemisphere 95.3
1838 Male, age 80, right hemisphere 85.6
Septal nuclei
nTPM: 125.0
2629 Female, age 94, right hemisphere 149.8
2031 Female, age 72, unknown 128.2
2394 Male, age 61, left hemisphere 123.3
2199 Male, age 80, right hemisphere 122.7
2009 Female, age 91, both hemispheres 121.7
1960 Male, age 74, unknown 118.7
2059 Female, age 85, both hemispheres 110.5
Stria terminalis, bed nucleus
nTPM: 115.0
1974 Female, age 91, both hemispheres 133.5
2486 Female, age 94, both hemispheres 109.7
2201 Male, age 74, unknown 101.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

211.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 190.6
Samples: 246

Max nTPM: 440.6
Min nTPM: 95.0
Std nTPM: 57.4
Median nTPM: 177.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 440.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 428.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 415.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 415.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 375.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 354.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 332.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 319.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 308.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 307.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 306.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 301.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 296.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 295.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 294.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 289.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 288.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 286.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 285.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 280.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 275.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 268.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 268.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 266.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 264.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 264.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 258.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 258.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 256.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 251.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 250.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 250.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 249.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 245.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 245.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 244.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 242.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 241.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 238.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 235.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 232.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 231.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 231.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 230.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 229.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 228.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 227.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 226.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 226.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 225.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 224.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 223.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 222.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 222.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 221.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 221.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 221.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 220.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 219.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 217.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 216.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 216.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 215.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 211.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 211.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 211.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 211.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 210.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 209.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 208.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 208.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 205.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 205.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 204.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 204.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 203.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 203.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 202.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 202.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 201.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 200.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 199.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 199.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 199.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 198.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 197.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 196.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 196.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 196.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 196.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 195.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 194.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 193.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 191.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 191.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 191.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 190.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 188.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 187.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 187.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 187.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 187.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 186.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 186.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 186.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 186.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 185.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 185.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 185.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 185.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 184.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 184.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 184.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 183.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 183.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 179.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 179.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 179.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 179.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 178.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 178.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 178.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 177.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 177.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 177.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 177.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 176.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 176.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 175.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 175.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 174.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 174.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 174.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 174.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 174.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 174.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 174.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 173.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 171.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 171.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 170.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 168.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 168.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 167.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 167.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 166.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 166.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 166.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 166.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 165.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 164.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 164.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 164.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 163.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 163.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 162.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 162.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 162.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 162.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 162.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 161.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 161.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 160.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 160.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 160.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 158.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 158.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 158.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 157.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 157.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 157.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 156.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 156.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 156.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 155.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 155.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 155.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 154.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 154.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 153.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 153.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 153.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 152.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 152.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 151.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 151.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 151.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 151.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 151.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 150.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 150.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 150.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 149.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 149.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 149.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 149.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 148.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 148.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 148.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 147.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 146.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 146.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 145.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 144.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 144.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 144.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 143.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 143.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 142.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 142.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 142.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 139.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 139.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 136.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 136.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 136.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 135.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 134.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 133.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 133.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 133.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 132.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 132.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 132.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 131.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 130.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 130.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 128.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 127.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 126.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 125.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 125.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 124.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 123.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 120.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 120.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 118.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 118.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 116.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 114.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 111.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 110.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 104.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 103.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 95.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 185.2
Samples: 246

Max nTPM: 469.1
Min nTPM: 87.5
Std nTPM: 63.8
Median nTPM: 172.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 469.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 458.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 447.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 407.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 364.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 353.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 341.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 337.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 333.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 330.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 321.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 319.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 311.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 306.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 305.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 301.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 294.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 292.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 287.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 282.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 277.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 273.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 273.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 269.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 265.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 261.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 258.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 258.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 258.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 255.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 253.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 252.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 250.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 248.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 245.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 242.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 238.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 237.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 236.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 235.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 235.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 233.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 231.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 229.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 228.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 225.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 225.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 223.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 222.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 221.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 220.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 220.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 219.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 216.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 216.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 215.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 215.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 214.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 214.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 213.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 212.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 212.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 211.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 211.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 211.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 208.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 206.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 204.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 204.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 202.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 201.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 201.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 201.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 200.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 199.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 198.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 197.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 197.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 196.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 196.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 195.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 195.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 193.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 193.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 191.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 190.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 190.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 189.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 189.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 188.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 188.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 187.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 186.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 185.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 184.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 184.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 184.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 183.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 183.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 183.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 182.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 182.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 180.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 180.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 180.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 179.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 179.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 179.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 179.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 178.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 178.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 177.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 177.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 176.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 176.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 176.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 176.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 175.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 174.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 173.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 173.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 173.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 172.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 172.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 172.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 171.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 171.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 171.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 170.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 170.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 168.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 168.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 166.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 166.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 166.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 166.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 165.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 165.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 165.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 164.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 164.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 164.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 163.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 163.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 162.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 161.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 160.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 160.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 160.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 159.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 158.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 157.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 157.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 156.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 155.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 154.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 154.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 153.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 153.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 153.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 152.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 152.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 152.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 152.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 151.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 151.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 151.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 151.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 150.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 150.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 149.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 148.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 148.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 148.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 147.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 146.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 146.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 145.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 145.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 145.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 145.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 143.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 143.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 142.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 142.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 142.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 141.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 140.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 140.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 140.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 137.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 136.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 136.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 136.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 135.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 135.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 134.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 133.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 133.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 133.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 133.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 130.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 130.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 130.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 129.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 129.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 128.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 128.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 126.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 126.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 125.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 124.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 123.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 122.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 122.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 122.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 121.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 120.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 120.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 120.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 118.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 118.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 118.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 116.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 116.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 116.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 116.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 115.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 115.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 115.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 115.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 115.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 114.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 114.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 114.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 113.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 113.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 112.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 111.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 109.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 106.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 102.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 101.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 100.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 97.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 87.5
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Brain - Putamen (basal ganglia)
Average nTPM: 211.1
Samples: 205

Max nTPM: 579.6
Min nTPM: 107.0
Std nTPM: 60.3
Median nTPM: 197.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 579.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 418.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 406.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 402.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 367.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 359.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 346.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 338.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 320.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 316.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 315.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 313.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 310.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 305.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 303.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 298.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 296.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 295.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 285.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 285.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 285.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 280.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 273.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 272.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 272.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 271.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 271.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 267.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 267.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 265.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 265.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 261.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 260.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 259.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 258.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 258.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 254.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 251.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 250.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 250.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 249.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 247.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 245.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 245.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 243.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 242.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 241.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 241.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 240.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 238.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 238.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 236.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 236.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 234.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 234.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 233.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 232.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 230.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 229.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 228.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 227.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 227.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 225.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 225.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 224.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 223.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 222.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 221.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 219.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 219.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 219.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 217.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 217.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 217.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 215.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 215.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 214.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 214.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 214.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 213.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 213.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 212.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 212.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 211.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 211.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 208.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 207.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 206.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 206.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 205.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 205.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 204.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 204.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 203.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 203.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 202.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 202.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 201.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 200.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 200.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 199.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 198.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 197.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 197.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 196.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 195.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 194.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 194.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 192.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 192.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 192.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 191.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 191.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 191.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 191.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 190.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 190.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 189.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 188.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 188.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 187.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 187.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 187.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 187.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 187.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 186.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 186.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 184.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 184.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 184.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 184.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 184.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 184.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 183.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 183.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 183.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 183.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 182.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 182.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 182.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 181.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 180.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 180.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 180.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 179.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 179.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 179.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 179.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 177.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 176.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 176.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 176.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 174.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 174.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 174.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 173.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 173.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 173.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 173.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 171.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 171.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 170.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 170.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 169.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 169.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 169.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 168.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 165.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 163.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 162.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 161.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 161.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 160.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 160.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 158.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 157.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 156.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 156.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 155.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 154.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 154.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 154.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 153.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 151.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 151.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 150.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 148.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 146.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 143.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 142.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 140.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 140.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 139.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 136.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 136.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 135.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 135.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 134.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 133.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 133.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 133.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 120.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 117.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 107.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 107.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

301.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 195.5
FF:10164-103B2 76 years, female 195.5
Nucleus accumbens
Scaled Tags Per Million: 106.7
FF:10037-101F1 23-56 years, mixed 106.7
Putamen
Scaled Tags Per Million: 126.6
FF:10176-103C5 60 years, female 126.6
Globus pallidus
Scaled Tags Per Million: 301.1
FF:10161-103A8 76 years, female 311.8
FF:10175-103C4 60 years, female 290.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.3
Pig sample Sample description nTPM
Caudate
nTPM: 71.6
Samples: 4

Max nTPM: 80.3
Min nTPM: 65.4
Sample A Female 66.5
Sample B Female 65.4
Sample C Male 80.3
Sample D Male 74.2
Putamen
nTPM: 96.8
Samples: 4

Max nTPM: 108.7
Min nTPM: 69.7
Sample A Female 108.7
Sample B Female 69.7
Sample C Male 104.6
Sample D Male 104.0
Septum
nTPM: 100.3
Samples: 4

Max nTPM: 139.2
Min nTPM: 79.5
Sample A Female 86.5
Sample B Female 79.5
Sample C Male 139.2
Sample D Male 96.0
Ventral pallidum
nTPM: 88.6
Samples: 4

Max nTPM: 114.9
Min nTPM: 64.9
Sample A Female 64.9
Sample B Female 87.6
Sample C Male 114.9
Sample D Male 87.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 55.8
Samples: 4

Max nTPM: 61.6
Min nTPM: 51.4
Sample A Male 54.3
Sample B Male 55.7
Sample C Female 61.6
Sample D Female 51.4
Septum
nTPM: 61.2
Samples: 4

Max nTPM: 67.7
Min nTPM: 52.1
Sample A Male 67.7
Sample B Male 57.4
Sample C Female 52.1
Sample D Female 67.7
Ventral forebrain
nTPM: 71.6
Samples: 4

Max nTPM: 80.5
Min nTPM: 56.7
Sample A Male 79.4
Sample B Male 69.8
Sample C Female 56.7
Sample D Female 80.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.8
69288650 Antisense, RP_050407_01_D10, Mouse strain C57BL/6J (56 days, male) 5.8
Pallidum
Expression energy: 7.2
69288650 Antisense, RP_050407_01_D10, Mouse strain C57BL/6J (56 days, male) 7.2

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