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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
732.9
nTPM
FANTOM5:
917.3
Scaled Tags Per Million
Pig:
270.9
nTPM
Allen mouse:
9.1
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
732.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 546.3
2301
Female, age 85, both hemispheres
647.9
2188
Female, age 91, both hemispheres
581.5
1984
Male, age 76, both hemispheres
496.5
2090
Male, age 80, both hemispheres
459.4
Dorsal cochlear nucleus nTPM: 494.0
2187
Female, age 91, both hemispheres
616.7
2802
Male, age 74, right hemisphere
488.9
2370
Male, age 61, both hemispheres
486.6
2058
Male, age 76, both hemispheres
475.5
2378
Male, age 80, both hemispheres
402.4
Dorsal tegmental nucleus nTPM: 512.5
2083
Male, age 80, both hemispheres
581.2
2358
Male, age 61, both hemispheres
513.2
2326
Male, age 74, both hemispheres
490.8
1936
Male, age 76, left hemisphere
464.8
Dorsolateral tegmental area nTPM: 455.7
2654
Male, age 80, both hemispheres
536.7
2751
Female, age 85, both hemispheres
532.2
2141
Male, age 76, both hemispheres
515.2
2360
Male, age 74, both hemispheres
373.9
2337
Male, age 61, both hemispheres
320.5
Kolliker-Fuse nucleus nTPM: 582.1
2793
Female, age 91, left hemisphere
718.6
2163
Male, age 80, both hemispheres
627.8
2315
Male, age 76, right hemisphere
399.7
Lateral lemniscal nuclei nTPM: 717.2
2036
Male, age 80, both hemispheres
831.5
2169
Male, age 76, both hemispheres
743.3
2453
Male, age 74, right hemisphere
715.3
2320
Female, age 91, left hemisphere
668.5
2746
Female, age 85, left hemisphere
627.5
Lateral parabrachial nucleus nTPM: 555.9
2139
Female, age 85, right hemisphere
706.4
2013
Male, age 80, both hemispheres
542.1
2790
Male, age 61, both hemispheres
540.3
2792
Male, age 76, both hemispheres
434.7
Lateral vestibular nucleus nTPM: 588.8
2184
Male, age 76, both hemispheres
659.0
2311
Male, age 80, both hemispheres
518.7
Locus coeruleus nTPM: 668.2
2123
Female, age 91, both hemispheres
796.5
2014
Male, age 55, unknown
743.3
2720
Male, age 74, both hemispheres
670.9
1980
Male, age 76, both hemispheres
637.7
2162
Male, age 80, both hemispheres
616.5
2317
Female, age 72, unknown
610.0
2788
Male, age 74, unknown
602.4
Medial parabrachial nucleus nTPM: 605.4
2170
Female, age 91, both hemispheres
701.3
2854
Male, age 80, both hemispheres
621.8
2156
Male, age 61, both hemispheres
621.1
2463
Female, age 85, right hemisphere
543.6
2786
Male, age 76, both hemispheres
539.3
Medial periolivary nuclei nTPM: 640.1
2171
Female, age 85, both hemispheres
847.7
2063
Male, age 76, both hemispheres
696.7
2458
Female, age 91, both hemispheres
584.8
2791
Male, age 74, right hemisphere
546.5
2081
Male, age 80, both hemispheres
525.0
Motor facial nucleus nTPM: 657.1
2327
Male, age 80, both hemispheres
753.5
2062
Male, age 76, both hemispheres
726.5
2365
Male, age 74, right hemisphere
647.0
2795
Female, age 91, both hemispheres
635.5
2697
Female, age 85, both hemispheres
633.1
2126
Male, age 61, both hemispheres
546.9
Motor trigeminal nucleus nTPM: 587.1
2079
Male, age 80, both hemispheres
676.6
2560
Male, age 74, both hemispheres
660.6
2321
Female, age 91, both hemispheres
579.3
2335
Male, age 61, both hemispheres
541.7
2309
Male, age 76, both hemispheres
477.2
Nuclei of the trapezoid body nTPM: 713.2
2159
Male, age 61, both hemispheres
845.3
2735
Female, age 85, both hemispheres
778.7
1983
Male, age 76, both hemispheres
687.8
2166
Male, age 80, both hemispheres
636.1
2368
Female, age 91, both hemispheres
618.1
Nucleus raphe magnus nTPM: 732.9
2172
Female, age 85, both hemispheres
904.0
2160
Male, age 61, both hemispheres
874.4
2455
Male, age 74, both hemispheres
711.3
2328
Male, age 80, both hemispheres
694.3
2051
Male, age 76, both hemispheres
634.4
2459
Female, age 91, both hemispheres
579.1
Paramedian reticular nucleus nTPM: 580.8
2050
Female, age 85, both hemispheres
702.4
2313
Male, age 61, both hemispheres
604.4
2057
Male, age 80, both hemispheres
571.1
2052
Male, age 76, both hemispheres
445.3
Pedunculopontine tegmental nucleus nTPM: 498.2
2334
Male, age 80, both hemispheres
567.7
1921
Female, age 85, both hemispheres
518.4
2338
Male, age 61, both hemispheres
408.4
Pontine nuclei nTPM: 709.0
2787
Female, age 85, both hemispheres
986.7
1863
Male, age 55, unknown
855.2
2727
Male, age 61, right hemisphere
740.9
1968
Male, age 76, left hemisphere
685.1
2109
Female, age 72, unknown
674.7
2454
Male, age 74, left hemisphere
590.4
2115
Male, age 80, left hemisphere
583.5
2319
Female, age 91, both hemispheres
555.2
Pontine raphe nucleus nTPM: 586.0
2122
Female, age 85, midline
701.8
2853
Male, age 76, midline
470.3
Posteroventral cochlear nucleus nTPM: 501.5
2752
Female, age 85, both hemispheres
535.6
2070
Male, age 76, both hemispheres
513.4
2341
Male, age 80, both hemispheres
499.5
2135
Female, age 91, both hemispheres
482.9
2371
Male, age 61, both hemispheres
476.3
Principal sensory trigeminal nucleus nTPM: 664.8
2158
Male, age 61, both hemispheres
797.6
2008
Male, age 80, left hemisphere
676.7
2367
Female, age 91, left hemisphere
594.7
2324
Male, age 76, both hemispheres
590.2
Reticular pontine nucleus, caudal nTPM: 618.8
2332
Male, age 80, right hemisphere
742.1
2457
Female, age 91, both hemispheres
597.1
2092
Male, age 76, both hemispheres
592.3
2559
Male, age 74, both hemispheres
543.8
Reticular pontine nucleus, oral nTPM: 576.0
2012
Female, age 85, both hemispheres
660.8
2366
Female, age 91, both hemispheres
647.1
2361
Male, age 74, both hemispheres
561.4
2167
Male, age 76, both hemispheres
507.7
1939
Male, age 80, both hemispheres
502.7
Reticulotegmental nucleus nTPM: 605.5
2322
Female, age 91, both hemispheres
626.2
2452
Male, age 74, both hemispheres
612.2
2333
Male, age 80, both hemispheres
611.2
2325
Male, age 76, both hemispheres
572.3
Spinal trigeminal nucleus, oral nTPM: 545.5
2164
Male, age 80, both hemispheres
630.5
2737
Female, age 85, both hemispheres
530.8
1978
Male, age 76, both hemispheres
475.1
Subcoeruleus area nTPM: 586.8
2089
Male, age 76, left hemisphere
665.7
2323
Female, age 91, left hemisphere
653.3
1958
Male, age 80, both hemispheres
597.6
2369
Female, age 85, left hemisphere
512.9
2451
Male, age 74, both hemispheres
504.3
Superior olive nTPM: 637.9
1875
Female, age 85, both hemispheres
722.1
2329
Male, age 80, right hemisphere
664.4
2561
Female, age 91, both hemispheres
647.8
2020
Male, age 76, both hemispheres
601.6
2364
Male, age 74, right hemisphere
553.4
Ventral periolivary nuclei nTPM: 695.2
2130
Female, age 85, both hemispheres
840.9
2165
Male, age 80, both hemispheres
789.1
2794
Female, age 91, left hemisphere
610.2
2023
Male, age 76, both hemispheres
540.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 603.4
2449
Male, age 74, both hemispheres
675.2
2840
Female, age 85, both hemispheres
620.5
2161
Male, age 80, both hemispheres
620.4
1959
Male, age 76, both hemispheres
619.9
2456
Female, age 91, both hemispheres
577.2
2359
Male, age 61, both hemispheres
506.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
270.9
Pig sample
Sample description
nTPM
Pons nTPM: 270.9
Samples: 4
Max nTPM: 381.2
Min nTPM: 227.7
Sample A
Female
381.2
Sample B
Female
228.7
Sample C
Male
227.7
Sample D
Male
246.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
