PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:732.9 nTPM
FANTOM5:917.3 Scaled Tags Per Million
Pig:270.9 nTPM
Mouse:193.2 nTPM
Allen mouse:10.0 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 732.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 546.3
2301 Female, age 85, both hemispheres 647.9
2188 Female, age 91, both hemispheres 581.5
1984 Male, age 76, both hemispheres 496.5
2090 Male, age 80, both hemispheres 459.4
Area postrema
nTPM: 394.2
2054 Male, age 76, both hemispheres 435.5
2306 Male, age 80, both hemispheres 383.5
2799 Male, age 61, both hemispheres 363.5
Dorsal cochlear nucleus
nTPM: 494.0
2187 Female, age 91, both hemispheres 616.7
2802 Male, age 74, right hemisphere 488.9
2370 Male, age 61, both hemispheres 486.6
2058 Male, age 76, both hemispheres 475.5
2378 Male, age 80, both hemispheres 402.4
Dorsal medullary reticular nucleus
nTPM: 551.4
2040 Female, age 85, both hemispheres 597.9
2088 Male, age 76, both hemispheres 538.5
2373 Male, age 61, both hemispheres 517.7
Dorsal motor vagal complex
nTPM: 516.9
2133 Female, age 91, both hemispheres 571.9
2844 Male, age 55, unknown 563.2
2643 Male, age 74, both hemispheres 540.8
2813 Female, age 72, unknown 538.3
2797 Male, age 61, both hemispheres 528.8
2000 Male, age 74, unknown 524.8
2185 Male, age 76, both hemispheres 495.4
2807 Female, age 85, both hemispheres 371.9
Dorsal tegmental nucleus
nTPM: 512.5
2083 Male, age 80, both hemispheres 581.2
2358 Male, age 61, both hemispheres 513.2
2326 Male, age 74, both hemispheres 490.8
1936 Male, age 76, left hemisphere 464.8
Dorsolateral tegmental area
nTPM: 455.7
2654 Male, age 80, both hemispheres 536.7
2751 Female, age 85, both hemispheres 532.2
2141 Male, age 76, both hemispheres 515.2
2360 Male, age 74, both hemispheres 373.9
2337 Male, age 61, both hemispheres 320.5
Gigantocellular reticular nuclei, medullary
nTPM: 567.9
2462 Male, age 74, both hemispheres 671.3
2314 Male, age 61, both hemispheres 617.2
2310 Male, age 80, both hemispheres 596.1
2387 Female, age 91, both hemispheres 564.6
1876 Female, age 85, both hemispheres 515.8
2022 Male, age 76, right hemisphere 442.5
Gigantocellular reticular nuclei, pars
nTPM: 625.6
2168 Male, age 76, both hemispheres 772.6
2336 Male, age 61, both hemispheres 632.4
2330 Male, age 80, both hemispheres 596.5
2706 Male, age 80, both hemispheres 573.9
2084 Female, age 85, both hemispheres 552.5
Inferior olive
nTPM: 523.0
2628 Female, age 91, both hemispheres 638.7
2178 Male, age 61, both hemispheres 552.7
2563 Male, age 74, both hemispheres 525.4
2085 Female, age 85, both hemispheres 500.0
2379 Male, age 80, both hemispheres 398.0
Kolliker-Fuse nucleus
nTPM: 582.1
2793 Female, age 91, left hemisphere 718.6
2163 Male, age 80, both hemispheres 627.8
2315 Male, age 76, right hemisphere 399.7
Lateral lemniscal nuclei
nTPM: 717.2
2036 Male, age 80, both hemispheres 831.5
2169 Male, age 76, both hemispheres 743.3
2453 Male, age 74, right hemisphere 715.3
2320 Female, age 91, left hemisphere 668.5
2746 Female, age 85, left hemisphere 627.5
Lateral medullary reticular nucleus
nTPM: 536.7
2044 Male, age 76, both hemispheres 592.6
2374 Male, age 61, both hemispheres 584.9
2804 Female, age 91, both hemispheres 530.1
2852 Male, age 80, both hemispheres 509.1
2190 Female, age 85, both hemispheres 503.9
2305 Male, age 74, both hemispheres 499.3
Lateral parabrachial nucleus
nTPM: 555.9
2139 Female, age 85, right hemisphere 706.4
2013 Male, age 80, both hemispheres 542.1
2790 Male, age 61, both hemispheres 540.3
2792 Male, age 76, both hemispheres 434.7
Lateral vestibular nucleus
nTPM: 588.8
2184 Male, age 76, both hemispheres 659.0
2311 Male, age 80, both hemispheres 518.7
Locus coeruleus
nTPM: 668.2
2123 Female, age 91, both hemispheres 796.5
2014 Male, age 55, unknown 743.3
2720 Male, age 74, both hemispheres 670.9
1980 Male, age 76, both hemispheres 637.7
2162 Male, age 80, both hemispheres 616.5
2317 Female, age 72, unknown 610.0
2788 Male, age 74, unknown 602.4
Medial olivary nucleus
nTPM: 457.4
2851 Male, age 80, both hemispheres 483.4
2138 Female, age 91, both hemispheres 470.0
1962 Male, age 76, both hemispheres 451.2
1943 Male, age 61, both hemispheres 424.8
Medial parabrachial nucleus
nTPM: 605.4
2170 Female, age 91, both hemispheres 701.3
2854 Male, age 80, both hemispheres 621.8
2156 Male, age 61, both hemispheres 621.1
2463 Female, age 85, right hemisphere 543.6
2786 Male, age 76, both hemispheres 539.3
Medial periolivary nuclei
nTPM: 640.1
2171 Female, age 85, both hemispheres 847.7
2063 Male, age 76, both hemispheres 696.7
2458 Female, age 91, both hemispheres 584.8
2791 Male, age 74, right hemisphere 546.5
2081 Male, age 80, both hemispheres 525.0
Medial vestibular nucleus
nTPM: 602.3
2624 Male, age 61, both hemispheres 752.1
2801 Male, age 74, both hemispheres 627.4
2134 Male, age 76, both hemispheres 587.5
2803 Female, age 91, both hemispheres 565.8
2093 Male, age 80, both hemispheres 551.9
2743 Female, age 85, both hemispheres 529.1
Motor facial nucleus
nTPM: 657.1
2327 Male, age 80, both hemispheres 753.5
2062 Male, age 76, both hemispheres 726.5
2365 Male, age 74, right hemisphere 647.0
2795 Female, age 91, both hemispheres 635.5
2697 Female, age 85, both hemispheres 633.1
2126 Male, age 61, both hemispheres 546.9
Motor hypoglossal nucleus
nTPM: 593.5
2461 Male, age 61, both hemispheres 661.2
2125 Female, age 91, both hemispheres 647.2
2182 Male, age 80, both hemispheres 645.9
2132 Female, age 85, both hemispheres 565.6
2277 Male, age 76, both hemispheres 447.6
Motor trigeminal nucleus
nTPM: 587.1
2079 Male, age 80, both hemispheres 676.6
2560 Male, age 74, both hemispheres 660.6
2321 Female, age 91, both hemispheres 579.3
2335 Male, age 61, both hemispheres 541.7
2309 Male, age 76, both hemispheres 477.2
Nuclei of the trapezoid body
nTPM: 713.2
2159 Male, age 61, both hemispheres 845.3
2735 Female, age 85, both hemispheres 778.7
1983 Male, age 76, both hemispheres 687.8
2166 Male, age 80, both hemispheres 636.1
2368 Female, age 91, both hemispheres 618.1
Nucleus ambiguus
nTPM: 525.4
2096 Female, age 85, both hemispheres 624.8
2071 Male, age 76, both hemispheres 426.1
Nucleus cuneatus
nTPM: 556.5
2564 Male, age 74, both hemispheres 649.3
2131 Male, age 76, both hemispheres 643.8
2100 Male, age 76, both hemispheres 620.4
2562 Male, age 61, both hemispheres 583.2
2805 Female, age 91, both hemispheres 560.7
2376 Male, age 61, both hemispheres 559.5
2381 Male, age 80, both hemispheres 515.4
2380 Male, age 80, both hemispheres 445.3
2808 Female, age 85, both hemispheres 430.4
Nucleus gracilis
nTPM: 470.2
2627 Male, age 74, both hemispheres 568.7
2382 Male, age 80, both hemispheres 461.7
2299 Female, age 85, both hemispheres 380.3
Nucleus raphe magnus
nTPM: 732.9
2172 Female, age 85, both hemispheres 904.0
2160 Male, age 61, both hemispheres 874.4
2455 Male, age 74, both hemispheres 711.3
2328 Male, age 80, both hemispheres 694.3
2051 Male, age 76, both hemispheres 634.4
2459 Female, age 91, both hemispheres 579.1
Nucleus raphe obscurus
nTPM: 515.0
2800 Male, age 61, midline 569.6
2845 Female, age 85, midline 537.5
2142 Male, age 76, midline 438.0
Nucleus raphe pallidus
nTPM: 548.0
2183 Male, age 80, midline 642.7
2145 Male, age 76, midline 514.9
1924 Male, age 61, midline 486.5
Nucleus tractus solitarii
nTPM: 421.2
2656 Male, age 76, both hemispheres 478.0
2307 Male, age 80, both hemispheres 440.3
2191 Female, age 85, both hemispheres 401.8
2144 Female, age 91, right hemisphere 364.5
Paramedian reticular nucleus
nTPM: 580.8
2050 Female, age 85, both hemispheres 702.4
2313 Male, age 61, both hemispheres 604.4
2057 Male, age 80, both hemispheres 571.1
2052 Male, age 76, both hemispheres 445.3
Parvicellular reticular nuclei
nTPM: 606.6
2558 Male, age 74, both hemispheres 706.6
2119 Male, age 80, both hemispheres 557.6
2095 Male, age 76, both hemispheres 555.7
Parvicellular reticular nuclei, medullary
nTPM: 574.3
2189 Female, age 91, both hemispheres 628.6
2091 Female, age 85, both hemispheres 559.3
2181 Male, age 80, left hemisphere 535.0
Pedunculopontine tegmental nucleus
nTPM: 498.2
2334 Male, age 80, both hemispheres 567.7
1921 Female, age 85, both hemispheres 518.4
2338 Male, age 61, both hemispheres 408.4
Peritrigeminal nucleus
nTPM: 569.9
2179 Male, age 61, both hemispheres 631.3
2067 Female, age 85, both hemispheres 548.1
2136 Male, age 76, both hemispheres 530.1
Pontine nuclei
nTPM: 709.0
2787 Female, age 85, both hemispheres 986.7
1863 Male, age 55, unknown 855.2
2727 Male, age 61, right hemisphere 740.9
1968 Male, age 76, left hemisphere 685.1
2109 Female, age 72, unknown 674.7
2454 Male, age 74, left hemisphere 590.4
2115 Male, age 80, left hemisphere 583.5
2319 Female, age 91, both hemispheres 555.2
Pontine raphe nucleus
nTPM: 586.0
2122 Female, age 85, midline 701.8
2853 Male, age 76, midline 470.3
Posteroventral cochlear nucleus
nTPM: 501.5
2752 Female, age 85, both hemispheres 535.6
2070 Male, age 76, both hemispheres 513.4
2341 Male, age 80, both hemispheres 499.5
2135 Female, age 91, both hemispheres 482.9
2371 Male, age 61, both hemispheres 476.3
Prepositus hypoglossal nucleus
nTPM: 495.2
2855 Female, age 85, right hemisphere 545.1
2086 Male, age 80, both hemispheres 445.3
Principal sensory trigeminal nucleus
nTPM: 664.8
2158 Male, age 61, both hemispheres 797.6
2008 Male, age 80, left hemisphere 676.7
2367 Female, age 91, left hemisphere 594.7
2324 Male, age 76, both hemispheres 590.2
Reticular pontine nucleus, caudal
nTPM: 618.8
2332 Male, age 80, right hemisphere 742.1
2457 Female, age 91, both hemispheres 597.1
2092 Male, age 76, both hemispheres 592.3
2559 Male, age 74, both hemispheres 543.8
Reticular pontine nucleus, oral
nTPM: 576.0
2012 Female, age 85, both hemispheres 660.8
2366 Female, age 91, both hemispheres 647.1
2361 Male, age 74, both hemispheres 561.4
2167 Male, age 76, both hemispheres 507.7
1939 Male, age 80, both hemispheres 502.7
Reticulotegmental nucleus
nTPM: 605.5
2322 Female, age 91, both hemispheres 626.2
2452 Male, age 74, both hemispheres 612.2
2333 Male, age 80, both hemispheres 611.2
2325 Male, age 76, both hemispheres 572.3
Spinal trigeminal nucleus, caudal
nTPM: 563.6
2390 Female, age 91, both hemispheres 657.3
2447 Male, age 76, both hemispheres 586.4
2312 Male, age 61, both hemispheres 526.0
2308 Male, age 80, both hemispheres 525.7
2642 Male, age 74, both hemispheres 522.6
Spinal trigeminal nucleus, interpolar
nTPM: 604.6
2625 Male, age 61, both hemispheres 818.5
2066 Male, age 76, right hemisphere 645.8
2389 Female, age 91, both hemispheres 572.0
2033 Male, age 80, both hemispheres 526.2
2386 Female, age 85, both hemispheres 460.8
Spinal trigeminal nucleus, oral
nTPM: 545.5
2164 Male, age 80, both hemispheres 630.5
2737 Female, age 85, both hemispheres 530.8
1978 Male, age 76, both hemispheres 475.1
Spinal vestibular nucleus
nTPM: 517.5
2186 Female, age 91, both hemispheres 572.8
2780 Male, age 80, both hemispheres 533.2
2796 Male, age 61, both hemispheres 526.4
2384 Male, age 74, both hemispheres 498.7
2806 Female, age 85, both hemispheres 489.9
2748 Male, age 76, both hemispheres 484.3
Subcoeruleus area
nTPM: 586.8
2089 Male, age 76, left hemisphere 665.7
2323 Female, age 91, left hemisphere 653.3
1958 Male, age 80, both hemispheres 597.6
2369 Female, age 85, left hemisphere 512.9
2451 Male, age 74, both hemispheres 504.3
Superior olive
nTPM: 637.9
1875 Female, age 85, both hemispheres 722.1
2329 Male, age 80, right hemisphere 664.4
2561 Female, age 91, both hemispheres 647.8
2020 Male, age 76, both hemispheres 601.6
2364 Male, age 74, right hemisphere 553.4
Superior vestibular nucleus
nTPM: 439.0
2015 Male, age 80, both hemispheres 486.7
2061 Male, age 76, both hemispheres 462.1
2383 Male, age 74, both hemispheres 368.2
Ventral medullary reticular nucleus
nTPM: 520.4
2060 Male, age 76, both hemispheres 525.9
2372 Male, age 61, both hemispheres 514.9
Ventral periolivary nuclei
nTPM: 695.2
2130 Female, age 85, both hemispheres 840.9
2165 Male, age 80, both hemispheres 789.1
2794 Female, age 91, left hemisphere 610.2
2023 Male, age 76, both hemispheres 540.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 541.8
2180 Male, age 61, both hemispheres 593.9
1986 Male, age 76, both hemispheres 571.5
2741 Female, age 85, both hemispheres 562.4
2302 Female, age 91, both hemispheres 526.9
2118 Male, age 80, both hemispheres 454.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 603.4
2449 Male, age 74, both hemispheres 675.2
2840 Female, age 85, both hemispheres 620.5
2161 Male, age 80, both hemispheres 620.4
1959 Male, age 76, both hemispheres 619.9
2456 Female, age 91, both hemispheres 577.2
2359 Male, age 61, both hemispheres 506.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 917.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 917.3
FF:10182-103D2 60 years, female 1118.5
FF:10165-103B3 76 years, female 716.0
Medulla oblongata
Scaled Tags Per Million: 708.2
FF:10038-101F2 18-64 years, mixed 867.1
FF:10174-103C3 60 years, female 683.9
FF:10155-103A2 76 years, female 573.5
Pons
Scaled Tags Per Million: 868.6
FF:10033-101E6 18-54 years, mixed 868.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 270.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 235.5
Samples: 4

Max nTPM: 273.5
Min nTPM: 187.8
Sample A Female 245.2
Sample B Female 235.4
Sample C Male 273.5
Sample D Male 187.8
Pons
nTPM: 270.9
Samples: 4

Max nTPM: 381.2
Min nTPM: 227.7
Sample A Female 381.2
Sample B Female 228.7
Sample C Male 227.7
Sample D Male 246.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 193.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 193.2
Samples: 4

Max nTPM: 214.7
Min nTPM: 181.3
Sample A Male 214.7
Sample B Male 190.7
Sample C Female 181.3
Sample D Female 186.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 10.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 10.0
69735759 Antisense, RP_050503_03_E02, Mouse strain C57BL/6J (56 days, male) 13.5
74513872 Antisense, RP_060208_01_E12, Mouse strain C57BL/6J (56 days, male) 6.5
Pons
Expression energy: 9.1
69735759 Antisense, RP_050503_03_E02, Mouse strain C57BL/6J (56 days, male) 12.7
74513872 Antisense, RP_060208_01_E12, Mouse strain C57BL/6J (56 days, male) 5.6

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