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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:2991.5 nTPM
HPA Brain:8179.4 nTPM
GTEx:2991.5 nTPM
FANTOM5:4453.3 Scaled Tags Per Million
Pig:1738.9 nTPM
Mouse:168.5 nTPM
Allen mouse:2.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA056030Antibody HPA063513Antibody CAB000039
Glial cells MediumLowMedium
Neuronal cells Not detectedNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8179.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 3952.1
2289 Male, age 61, right hemisphere 5621.8
2481 Female, age 94, left hemisphere 5016.3
1857 Female, age 85, left hemisphere 4257.3
1854 Male, age 80, left hemisphere 4176.3
2288 Male, age 75, left hemisphere 3554.2
1781 Male, age 74, unknown 3324.2
2290 Female, age 72, unknown 2919.6
2846 Female, age 79, unknown 2747.0
Globus pallidus, externus
nTPM: 8179.4
1996 Male, age 80, right hemisphere 11476.8
2646 Male, age 61, right hemisphere 9109.7
2772 Female, age 79, unknown 7933.2
2567 Female, age 72, unknown 7058.4
2395 Male, age 75, both hemispheres 5318.7
Globus pallidus, internus
nTPM: 7303.2
2037 Male, age 80, right hemisphere 9738.7
2111 Female, age 85, right hemisphere 8492.4
1818 Male, age 74, unknown 7944.6
2483 Female, age 94, right hemisphere 7620.2
2566 Female, age 72, unknown 6995.0
2778 Female, age 91, both hemispheres 6208.0
2287 Male, age 75, right hemisphere 4123.3
Nucleus accumbens
nTPM: 3433.5
2732 Male, age 80, right hemisphere 5156.0
2391 Female, age 94, left hemisphere 4543.0
1806 Female, age 85, left hemisphere 3976.8
2698 Female, age 72, unknown 3874.8
2286 Male, age 75, left hemisphere 3341.0
1856 Female, age 91, right hemisphere 2589.6
1783 Male, age 74, unknown 2128.5
2824 Male, age 61, right hemisphere 1858.5
Nucleus basalis of Meynert
nTPM: 6191.0
2569 Male, age 61, both hemispheres 10370.8
2393 Male, age 80, right hemisphere 6684.5
2484 Female, age 94, left hemisphere 4656.0
2821 Male, age 75, both hemispheres 3052.9
Nucleus of the diagonal band
nTPM: 4158.7
1812 Female, age 91, both hemispheres 5621.9
1979 Male, age 74, unknown 5180.8
2029 Male, age 61, right hemisphere 3991.2
2775 Male, age 80, right hemisphere 3949.0
2195 Female, age 85, both hemispheres 2050.3
Putamen
nTPM: 4127.0
2647 Male, age 75, left hemisphere 5898.5
2489 Female, age 72, unknown 5852.3
1829 Male, age 74, unknown 4837.2
2482 Female, age 94, left hemisphere 4776.6
1937 Female, age 91, right hemisphere 2670.4
2466 Female, age 79, unknown 2477.4
1838 Male, age 80, right hemisphere 2376.6
Septal nuclei
nTPM: 5607.2
2199 Male, age 80, right hemisphere 10835.9
2394 Male, age 61, left hemisphere 8012.9
2629 Female, age 94, right hemisphere 6061.9
2009 Female, age 91, both hemispheres 5023.6
2059 Female, age 85, both hemispheres 5017.2
1960 Male, age 74, unknown 2239.2
2031 Female, age 72, unknown 2059.3
Stria terminalis, bed nucleus
nTPM: 3558.6
2201 Male, age 74, unknown 5508.5
1974 Female, age 91, both hemispheres 3121.2
2486 Female, age 94, both hemispheres 2046.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2991.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2991.5
Samples: 246

Max nTPM: 12083.1
Min nTPM: 100.7
Std nTPM: 2060.0
Median nTPM: 2404.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 12083.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 10589.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 9971.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 9633.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 8809.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 8556.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 8532.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 7898.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 7673.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 7501.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 7297.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 7263.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7170.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 7022.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 6942.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 6918.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 6814.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 6717.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 6696.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 6633.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 6570.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 6508.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 6505.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 6144.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 5887.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 5769.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 5483.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 5443.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 5352.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5328.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 5287.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 5188.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 5140.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 5130.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 5122.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 5119.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 5100.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5062.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 5038.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 4989.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 4982.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 4979.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 4855.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 4816.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 4753.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 4700.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 4695.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 4663.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 4610.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 4538.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 4437.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 4428.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 4419.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 4284.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4267.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4194.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 4142.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 4067.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 4016.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 4007.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 4000.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 3835.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 3785.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 3783.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 3754.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 3695.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 3605.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 3558.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 3514.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 3498.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 3464.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 3435.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 3410.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 3393.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 3342.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 3328.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 3319.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 3261.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 3260.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 3238.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 3231.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 3155.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 3139.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 3064.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 3049.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 3008.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 2970.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 2965.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 2960.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 2940.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 2932.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 2922.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 2897.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 2862.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 2847.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 2831.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 2814.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 2772.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 2770.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2762.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 2758.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 2757.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 2692.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 2690.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 2687.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2679.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 2670.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2636.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 2631.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 2621.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2594.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 2578.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2576.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 2562.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 2550.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2530.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 2511.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 2506.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 2439.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2436.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2434.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 2425.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2406.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 2403.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2396.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2366.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 2364.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 2354.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 2331.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2303.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2260.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 2245.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 2216.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2211.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 2206.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2200.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 2192.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 2189.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 2184.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 2179.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 2170.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 2168.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2123.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 2115.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2110.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 2101.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 2032.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 2011.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 2001.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1971.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1913.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1902.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1888.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1885.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1879.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1854.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1850.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1821.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1817.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1811.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1798.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1789.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1783.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1765.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1760.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1755.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1751.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1744.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1702.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1684.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1682.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1680.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1670.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1650.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1642.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1632.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1623.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1616.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1615.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1613.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1611.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1605.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1588.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1586.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1586.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1577.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1545.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1540.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1524.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1517.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1511.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1493.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1483.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1458.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1457.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1414.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1410.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1403.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1386.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1381.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1379.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1378.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1365.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1358.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1357.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1353.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1353.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1290.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1270.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1266.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1241.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1215.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1207.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1166.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1163.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1110.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1108.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1100.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1062.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1056.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1040.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1019.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1010.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1003.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 955.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 925.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 918.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 912.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 889.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 886.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 878.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 850.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 804.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 794.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 778.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 764.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 764.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 692.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 653.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 649.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 577.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 510.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 428.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 376.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 293.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 100.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1949.5
Samples: 246

Max nTPM: 9255.4
Min nTPM: 122.3
Std nTPM: 1602.0
Median nTPM: 1429.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 9255.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 7882.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 7776.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 7658.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 7310.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 7023.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 7002.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 6290.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 6200.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 6106.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 5955.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 5616.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 5402.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 5059.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 5042.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 4926.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 4911.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 4783.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 4547.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 4522.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 4390.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 4288.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 4275.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 4237.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 4128.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 3963.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 3826.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 3772.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 3708.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 3542.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 3506.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 3494.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 3389.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 3382.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 3352.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 3339.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 3222.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 3175.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 3120.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 3094.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 3094.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 3068.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 3037.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 3030.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 3027.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 2993.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 2988.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 2949.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 2851.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 2827.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 2768.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 2728.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 2697.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 2652.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 2641.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 2612.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 2605.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 2517.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 2502.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2483.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 2458.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 2449.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 2434.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 2433.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 2418.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 2376.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 2358.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 2347.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 2302.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 2282.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 2271.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 2260.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 2214.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2208.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 2199.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 2197.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 2184.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 2177.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 2177.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 2152.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 2146.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 2134.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 2087.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 2073.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 2052.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 2038.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 2035.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 2027.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 1977.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1976.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 1970.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1966.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1965.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1948.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 1915.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1849.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1837.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1831.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1793.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1785.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1764.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1757.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1756.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1705.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1689.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1654.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1619.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1599.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1583.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1565.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1535.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1521.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1502.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1482.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1471.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1470.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1469.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1467.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1460.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 1459.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1451.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1441.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1430.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1427.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1418.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1407.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1374.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1369.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1354.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1339.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1335.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1322.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1319.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1315.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 1311.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1310.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1294.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1272.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1259.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1231.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1209.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1209.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1204.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1187.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1153.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 1139.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1133.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 1132.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1129.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 1123.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1122.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1121.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1121.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 1098.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1098.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1097.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1091.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1064.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 1061.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1056.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1053.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1052.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 1047.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1038.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 1037.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1037.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1032.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1030.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1025.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1006.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1003.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 981.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 949.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 947.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 936.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 928.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 925.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 921.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 920.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 916.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 904.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 904.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 891.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 888.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 883.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 873.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 865.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 863.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 862.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 853.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 851.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 850.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 839.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 833.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 830.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 813.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 798.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 794.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 789.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 787.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 777.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 765.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 755.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 752.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 733.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 719.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 714.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 705.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 674.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 659.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 655.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 654.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 648.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 632.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 620.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 608.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 600.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 596.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 565.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 558.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 554.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 548.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 545.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 544.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 535.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 530.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 517.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 514.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 506.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 489.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 460.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 459.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 432.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 427.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 420.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 396.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 386.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 378.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 343.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 336.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 236.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 228.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 208.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 171.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 159.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 122.3
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Brain - Putamen (basal ganglia)
Average nTPM: 2362.9
Samples: 205

Max nTPM: 12275.9
Min nTPM: 76.1
Std nTPM: 1815.0
Median nTPM: 1939.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 12275.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 9894.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 9294.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 7368.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 7015.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 6873.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 6563.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 6509.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6427.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 6210.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 6133.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 5637.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 5485.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5421.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 5341.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 5195.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5147.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 4888.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 4737.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4712.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 4648.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 4614.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 4544.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 4542.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 4472.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 4355.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 4269.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 4259.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 4189.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 4189.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 4155.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 4030.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 3931.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 3869.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 3851.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 3786.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 3768.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 3639.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 3482.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 3445.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 3367.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 3301.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 3261.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 3224.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 3211.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 3131.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 3117.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 3050.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 3047.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 3011.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 2946.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 2913.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 2902.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 2835.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 2761.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 2755.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 2752.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 2730.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 2701.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 2697.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 2654.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 2653.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 2649.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 2646.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 2644.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 2562.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 2543.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 2519.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 2505.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 2449.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 2421.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 2402.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 2381.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2376.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 2370.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2346.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2341.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 2339.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 2317.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 2264.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 2252.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 2252.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2223.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 2186.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 2185.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 2117.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 2092.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 2086.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 2082.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 2078.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 2067.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 2065.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2061.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 2054.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 2047.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 2033.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 2015.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 2008.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1995.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1984.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1952.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1943.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1939.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1846.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1836.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1818.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1808.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1805.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1804.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1791.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1758.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1756.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1752.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1750.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1735.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1724.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1703.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1676.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1648.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1647.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1626.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1602.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1588.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 1585.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1579.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1562.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1496.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1470.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1466.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1454.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1436.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1431.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1417.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1402.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1402.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1380.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1378.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1348.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1340.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1337.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1335.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1325.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1303.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1296.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1286.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1285.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1279.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1255.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1251.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1245.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1229.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1223.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1222.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1212.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1169.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1163.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1155.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1138.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1100.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1059.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1056.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1036.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 993.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 982.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 964.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 963.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 948.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 940.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 931.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 919.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 902.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 882.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 872.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 837.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 836.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 834.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 829.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 770.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 750.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 732.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 707.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 689.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 689.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 686.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 686.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 686.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 678.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 670.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 641.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 618.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 588.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 549.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 547.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 533.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 518.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 494.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 485.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 448.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 410.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 349.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 276.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 273.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 212.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 160.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 76.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

4453.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 2454.2
FF:10164-103B2 76 years, female 2454.2
Nucleus accumbens
Scaled Tags Per Million: 1683.8
FF:10037-101F1 23-56 years, mixed 1683.8
Putamen
Scaled Tags Per Million: 1479.6
FF:10176-103C5 60 years, female 1479.6
Globus pallidus
Scaled Tags Per Million: 4453.3
FF:10161-103A8 76 years, female 6034.4
FF:10175-103C4 60 years, female 2872.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1738.9
Pig sample Sample description nTPM
Caudate
nTPM: 963.9
Samples: 4

Max nTPM: 1123.4
Min nTPM: 835.4
Sample A Female 964.6
Sample B Female 932.1
Sample C Male 1123.4
Sample D Male 835.4
Putamen
nTPM: 1138.4
Samples: 4

Max nTPM: 1926.0
Min nTPM: 840.2
Sample A Female 1926.0
Sample B Female 841.3
Sample C Male 840.2
Sample D Male 946.0
Septum
nTPM: 1738.9
Samples: 4

Max nTPM: 2631.2
Min nTPM: 911.1
Sample A Female 911.1
Sample B Female 1578.2
Sample C Male 2631.2
Sample D Male 1835.0
Ventral pallidum
nTPM: 1286.3
Samples: 4

Max nTPM: 1931.2
Min nTPM: 655.3
Sample A Female 655.3
Sample B Female 1546.2
Sample C Male 1931.2
Sample D Male 1012.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 71.6
Samples: 4

Max nTPM: 80.9
Min nTPM: 64.8
Sample A Male 69.8
Sample B Male 70.9
Sample C Female 80.9
Sample D Female 64.8
Septum
nTPM: 168.5
Samples: 4

Max nTPM: 195.4
Min nTPM: 117.2
Sample A Male 117.2
Sample B Male 180.3
Sample C Female 195.4
Sample D Female 181.0
Ventral forebrain
nTPM: 136.4
Samples: 4

Max nTPM: 142.8
Min nTPM: 125.4
Sample A Male 135.2
Sample B Male 142.8
Sample C Female 142.1
Sample D Female 125.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.5
1358 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 2.0
1357 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 1.3
79591671 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 1.1
79913385 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 0.8
Pallidum
Expression energy: 2.2
1357 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 2.6
1358 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 2.0
79591671 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 1.8
79913385 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 0.5

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