HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:822.0 nTPM
HPA Brain:339.4 nTPM
GTEx:822.0 nTPM
FANTOM5:291.9 Scaled Tags Per Million
Pig:643.1 nTPM
Mouse:1497.8 nTPM
Allen mouse:13.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002485Antibody CAB004080
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 339.4
Sample id Sample description nTPM
Hippocampus
nTPM: 315.4
1898 Male, age 80, left hemisphere 389.7
2529 Female, age 94, left hemisphere 364.1
2621 Female, age 67, right hemisphere 327.0
1855 Male, age 76, left hemisphere 279.3
2148 Female, age 91, left hemisphere 277.2
1911 Female, age 85, right hemisphere 254.8
Dentate gyrus
nTPM: 287.3
2530 Female, age 94, left hemisphere 356.4
1927 Female, age 91, both hemispheres 313.7
2010 Male, age 76, both hemispheres 270.0
2246 Female, age 85, both hemispheres 269.3
2531 Female, age 67, both hemispheres 261.6
2528 Male, age 74, both hemispheres 253.1
Entorhinal gyrus
nTPM: 295.5
2764 Male, age 80, right hemisphere 333.2
1938 Female, age 85, left hemisphere 306.0
1787 Male, age 76, left hemisphere 298.4
2686 Male, age 75, right hemisphere 292.2
2117 Female, age 91, right hemisphere 275.6
2613 Female, age 94, left hemisphere 267.5
Hippocampus, CA1
nTPM: 317.2
2749 Male, age 80, left hemisphere 497.9
2527 Male, age 74, both hemispheres 310.6
1873 Female, age 85, both hemispheres 302.1
2082 Female, age 91, right hemisphere 263.4
2045 Male, age 76, both hemispheres 212.2
Hippocampus, CA2
nTPM: 322.1
1963 Male, age 80, left hemisphere 391.1
1892 Male, age 76, both hemispheres 387.0
2437 Female, age 94, left hemisphere 344.4
2249 Male, age 74, both hemispheres 303.7
2113 Female, age 91, right hemisphere 273.8
1940 Female, age 85, left hemisphere 232.5
Hippocampus, CA3
nTPM: 304.7
2137 Male, age 80, left hemisphere 407.3
2436 Male, age 74, both hemispheres 356.9
1867 Male, age 76, both hemispheres 336.4
1891 Female, age 85, both hemispheres 271.8
2861 Female, age 67, both hemispheres 270.7
2620 Female, age 94, left hemisphere 185.2
Parahippocampal cortex
nTPM: 300.7
2250 Female, age 67, right hemisphere 356.9
2245 Female, age 91, both hemispheres 343.8
1850 Male, age 80, both hemispheres 338.8
1990 Female, age 91, right hemisphere 331.7
1933 Female, age 85, both hemispheres 312.6
2532 Female, age 72, left hemisphere 301.1
2692 Male, age 74, both hemispheres 266.1
2622 Female, age 67, right hemisphere 262.5
2018 Male, age 76, both hemispheres 248.4
2693 Female, age 94, both hemispheres 245.6
Perirhinal gyrus
nTPM: 339.4
1847 Female, age 91, left hemisphere 403.8
1794 Male, age 80, right hemisphere 371.8
1841 Female, age 85, right hemisphere 340.5
2521 Female, age 94, right hemisphere 327.3
2848 Male, age 76, right hemisphere 253.8
Subiculum
nTPM: 286.7
1901 Male, age 80, both hemispheres 339.0
1977 Female, age 85, both hemispheres 324.6
2438 Female, age 94, left hemisphere 321.0
2619 Male, age 74, both hemispheres 270.2
2042 Male, age 76, both hemispheres 256.3
2729 Female, age 91, right hemisphere 209.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 822.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 822.0
Samples: 197

Max nTPM: 2680.0
Min nTPM: 393.3
Std nTPM: 275.6
Median nTPM: 771.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2680.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1714.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1691.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1663.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1649.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1489.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1484.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1365.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1336.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1329.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 1255.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 291.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 291.9
FF:10169-103B7 60 years, female 352.0
FF:10153-102I9 76 years, female 231.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 643.1
Pig sample Sample description nTPM
Subiculum
nTPM: 530.4
Samples: 4

Max nTPM: 737.9
Min nTPM: 453.9
Sample A Female 737.9
Sample B Female 466.7
Sample C Male 463.2
Sample D Male 453.9
Dorsal hippocampus
nTPM: 635.9
Samples: 4

Max nTPM: 819.8
Min nTPM: 464.3
Sample A Female 819.8
Sample B Female 526.5
Sample C Male 732.9
Sample D Male 464.3
Entorhinal cortex
nTPM: 643.1
Samples: 4

Max nTPM: 720.4
Min nTPM: 550.4
Sample A Female 643.4
Sample B Female 720.4
Sample C Male 658.3
Sample D Male 550.4
Ventral hippocampus
nTPM: 551.4
Samples: 4

Max nTPM: 676.8
Min nTPM: 395.4
Sample A Female 560.4
Sample B Female 395.4
Sample C Male 676.8
Sample D Male 573.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1497.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1497.8
Samples: 4

Max nTPM: 1564.0
Min nTPM: 1455.1
Sample A Male 1455.1
Sample B Male 1508.6
Sample C Female 1564.0
Sample D Female 1463.3
Hippocampal formation
nTPM: 1458.5
Samples: 4

Max nTPM: 1637.7
Min nTPM: 1337.3
Sample A Male 1637.7
Sample B Male 1351.2
Sample C Female 1337.3
Sample D Female 1507.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.5
73992933 Antisense, RP_051214_03_C11, Mouse strain C57BL/6J (56 days, male) 13.5
69568980 Antisense, RP_050426_03_C01, Mouse strain C57BL/6J (56 days, male) 13.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org