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RPL27
HPA
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  • RPL27
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:857.2 nTPM
FANTOM5:49.7 Scaled Tags Per Million
Pig:294.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002649
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

857.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 857.2
Samples: 246

Max nTPM: 2459.1
Min nTPM: 478.0
Std nTPM: 259.8
Median nTPM: 810.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2459.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1946.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1851.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1816.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1708.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1617.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1607.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1547.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1452.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1396.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1377.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1352.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1317.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1286.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1282.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1263.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1196.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1191.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1187.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1170.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1161.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1157.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1152.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1147.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1143.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1114.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1109.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1103.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1102.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1096.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1091.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1091.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1087.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1063.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1062.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1059.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1056.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1036.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1033.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1032.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1028.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1027.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1022.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1020.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1019.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1009.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1008.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1008.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1004.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1002.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 998.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 997.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 982.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 974.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 967.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 965.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 964.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 963.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 961.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 960.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 954.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 946.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 945.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 944.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 939.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 938.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 936.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 934.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 931.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 930.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 926.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 924.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 917.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 915.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 914.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 910.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 909.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 904.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 901.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 899.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 897.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 896.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 896.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 891.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 887.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 883.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 880.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 875.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 874.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 871.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 870.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 864.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 862.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 858.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 855.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 855.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 855.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 853.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 853.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 851.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 850.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 850.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 849.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 847.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 847.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 843.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 843.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 842.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 841.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 840.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 834.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 830.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 828.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 827.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 827.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 824.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 821.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 821.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 819.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 819.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 815.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 812.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 812.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 809.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 808.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 808.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 807.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 802.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 801.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 800.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 800.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 796.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 794.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 788.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 787.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 786.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 785.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 782.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 776.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 775.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 775.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 772.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 765.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 764.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 762.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 761.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 761.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 760.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 759.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 758.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 756.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 755.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 752.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 751.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 751.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 751.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 749.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 747.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 746.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 744.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 741.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 739.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 738.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 737.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 734.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 734.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 732.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 731.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 721.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 719.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 717.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 715.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 714.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 710.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 708.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 707.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 702.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 701.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 699.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 697.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 694.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 693.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 690.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 688.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 687.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 686.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 685.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 684.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 681.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 679.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 677.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 675.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 675.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 671.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 670.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 669.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 666.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 663.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 662.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 656.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 655.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 653.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 652.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 652.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 651.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 650.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 646.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 642.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 642.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 641.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 640.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 640.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 639.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 637.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 637.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 634.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 627.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 626.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 616.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 615.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 615.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 613.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 607.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 604.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 603.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 591.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 589.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 582.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 582.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 576.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 564.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 564.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 563.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 561.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 557.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 556.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 553.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 541.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 540.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 536.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 527.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 523.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 502.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 499.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 489.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 478.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

49.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 49.7
FF:10164-103B2 76 years, female 49.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

294.3
Pig sample Sample description nTPM
Caudate
nTPM: 294.4
Samples: 4

Max nTPM: 357.0
Min nTPM: 234.6
Sample A Female 357.0
Sample B Female 297.5
Sample C Male 288.3
Sample D Male 234.6

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