We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL27
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL27
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1763.4 nTPM
GTEx:1763.4 nTPM
FANTOM5:105.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002649
Squamous epithelial cells High



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1763.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1763.4
Samples: 156

Max nTPM: 5367.5
Min nTPM: 1017.8
Std nTPM: 446.5
Median nTPM: 1690.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 5367.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 2953.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 2698.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2631.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 2619.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 2582.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 2554.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2444.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2410.7
GTEX-16NPV-2526-SM-6M483 50-59 years, female 2325.6
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2316.8
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 2314.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2308.8
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2281.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 2232.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2219.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2206.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 2206.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 2180.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 2145.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2144.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 2125.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2106.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 2063.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2044.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2041.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2016.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 2014.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 1997.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1991.5
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1984.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1982.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1980.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1979.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1977.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1971.9
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1960.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1956.2
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1943.7
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1931.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1929.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1927.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1925.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1919.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1912.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 1895.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1882.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1879.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1879.2
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1855.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1852.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1850.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1850.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 1846.2
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1834.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1829.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1823.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1814.0
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1791.0
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1789.2
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1782.2
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1778.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1773.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1746.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1743.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1731.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1723.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1720.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1719.9
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1719.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1716.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1712.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1712.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1702.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 1699.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1699.2
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1697.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1692.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1689.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 1686.7
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1680.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1670.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1665.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1664.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1664.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1657.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1651.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1648.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1647.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1646.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1645.0
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1642.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1641.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1637.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1634.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 1630.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1625.5
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1612.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1611.0
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1608.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1601.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1599.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1597.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1588.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1586.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1585.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1570.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1562.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1546.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1540.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1539.8
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1528.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1521.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1520.7
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1493.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1492.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1489.2
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1486.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1480.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1478.0
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1476.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1475.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1474.7
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1458.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1443.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1429.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1426.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1418.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1417.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1409.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1404.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1403.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1396.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1394.6
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 1383.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1376.7
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1374.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1374.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1373.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1360.5
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1357.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1340.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1339.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1319.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1312.7
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1308.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1289.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1286.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1283.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1260.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1253.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1242.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1224.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1171.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1171.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1017.8
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

105.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 105.2
FF:10204-103F6 68 years, female 105.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org