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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
Low
Cells in tubules:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1241.0
nTPM
HPA:
726.2
nTPM
GTEx:
1241.0
nTPM
FANTOM5:
107.6
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA002649
Cells in glomeruli
Low
Cells in tubules
Medium
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
726.2
Female, age 58
Kidney sample 55 nTPM: 821.1
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 810.7
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 582.2
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 920.7
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 546.5
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 603.1
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 1302
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 374.9
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 574.3
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1241.0
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 1241.0
Samples: 85
Max nTPM: 2270.7
Min nTPM: 801.8
Std nTPM: 332.0
Median nTPM: 1159.4
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
2270.7
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
2216.1
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
2077.0
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
1950.2
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
1915.6
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
1849.7
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
1805.7
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
1778.8
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
1740.9
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
1722.8
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
1583.4
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
1561.8
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
1548.2
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
1537.3
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
1518.9
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
1513.3
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
1497.1
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
1495.7
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
1494.9
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
1492.2
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
1464.8
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
1463.0
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
1453.0
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
1421.4
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
1418.1
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
1397.1
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
1384.2
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
1328.9
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
1318.2
GTEX-O5YV-1226-SM-EV795
60-69 years, female
1291.9
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
1275.7
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
1262.5
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
1233.9
GTEX-13112-2126-SM-5GCO4
50-59 years, male
1223.3
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
1219.9
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
1213.0
GTEX-14C39-2126-SM-664OH
40-49 years, male
1211.6
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
1192.5
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
1190.1
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
1177.5
GTEX-12696-0926-SM-5FQTV
60-69 years, male
1164.5
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
1160.1
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
1159.4
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
1144.0
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
1143.2
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
1117.6
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
1102.0
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
1097.4
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
1090.4
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
1086.9
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
1086.0
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
1080.4
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
1072.8
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
1066.8
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
1049.2
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
1034.2
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
1023.9
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
1021.9
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
1010.6
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
1008.0
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
1007.8
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
997.4
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
989.8
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
986.1
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
977.0
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
965.2
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
962.7
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
959.2
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
952.4
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
951.5
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
940.3
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
939.8
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
934.4
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
929.4
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
920.2
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
914.0
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
903.9
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
898.5
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
894.6
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
892.5
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
874.0
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
839.2
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
817.9
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
808.3
GTEX-RN64-1626-SM-48FD7
50-59 years, male
801.8
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Kidney - Medulla Average nTPM: 1171.5
Samples: 4
Max nTPM: 1540.2
Min nTPM: 938.3
Std nTPM: 251.6
Median nTPM: 1103.6
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
1540.2
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
1267.7
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
939.6
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
938.3
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
