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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:44.2 nTPM
HPA Brain:675.1 nTPM
GTEx:44.2 nTPM
FANTOM5:1048.9 Scaled Tags Per Million
Pig:286.8 nTPM
Mouse:137.6 nTPM
Allen mouse:20.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA022275Antibody CAB009792
Glial cells Not detectedMedium
Neuronal cells Not detectedLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

675.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 421.7
1781 Male, age 74, unknown 527.4
2481 Female, age 94, left hemisphere 526.6
2288 Male, age 75, left hemisphere 499.0
2846 Female, age 79, unknown 405.0
1854 Male, age 80, left hemisphere 385.7
2290 Female, age 72, unknown 383.4
2289 Male, age 61, right hemisphere 340.5
1857 Female, age 85, left hemisphere 306.3
Globus pallidus, externus
nTPM: 581.7
2772 Female, age 79, unknown 840.9
2395 Male, age 75, both hemispheres 708.7
1996 Male, age 80, right hemisphere 505.8
2567 Female, age 72, unknown 452.0
2646 Male, age 61, right hemisphere 400.9
Globus pallidus, internus
nTPM: 580.7
2287 Male, age 75, right hemisphere 789.0
1818 Male, age 74, unknown 703.9
2483 Female, age 94, right hemisphere 667.3
2037 Male, age 80, right hemisphere 503.9
2566 Female, age 72, unknown 486.8
2778 Female, age 91, both hemispheres 486.6
2111 Female, age 85, right hemisphere 427.4
Nucleus accumbens
nTPM: 385.8
2391 Female, age 94, left hemisphere 508.0
2286 Male, age 75, left hemisphere 484.4
2698 Female, age 72, unknown 409.8
1856 Female, age 91, right hemisphere 388.6
1783 Male, age 74, unknown 358.7
1806 Female, age 85, left hemisphere 318.6
2732 Male, age 80, right hemisphere 315.7
2824 Male, age 61, right hemisphere 302.3
Nucleus basalis of Meynert
nTPM: 441.8
2821 Male, age 75, both hemispheres 605.3
2484 Female, age 94, left hemisphere 414.0
2569 Male, age 61, both hemispheres 394.7
2393 Male, age 80, right hemisphere 353.1
Nucleus of the diagonal band
nTPM: 654.2
2775 Male, age 80, right hemisphere 793.5
1812 Female, age 91, both hemispheres 779.4
2195 Female, age 85, both hemispheres 666.6
2029 Male, age 61, right hemisphere 613.7
1979 Male, age 74, unknown 417.6
Putamen
nTPM: 398.6
2647 Male, age 75, left hemisphere 540.4
2482 Female, age 94, left hemisphere 500.2
1838 Male, age 80, right hemisphere 382.6
1829 Male, age 74, unknown 380.0
1937 Female, age 91, right hemisphere 363.6
2466 Female, age 79, unknown 360.3
2489 Female, age 72, unknown 263.5
Septal nuclei
nTPM: 590.2
1960 Male, age 74, unknown 738.8
2031 Female, age 72, unknown 716.4
2629 Female, age 94, right hemisphere 702.4
2009 Female, age 91, both hemispheres 630.4
2059 Female, age 85, both hemispheres 453.2
2199 Male, age 80, right hemisphere 450.9
2394 Male, age 61, left hemisphere 439.0
Stria terminalis, bed nucleus
nTPM: 675.1
1974 Female, age 91, both hemispheres 875.5
2486 Female, age 94, both hemispheres 648.6
2201 Male, age 74, unknown 501.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 44.1
Samples: 246

Max nTPM: 197.3
Min nTPM: 25.4
Std nTPM: 13.1
Median nTPM: 42.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 197.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 82.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 75.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 72.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 69.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 64.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 63.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 62.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 62.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 61.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 60.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 59.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 59.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 57.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 57.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 56.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 56.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 55.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 55.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 55.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 54.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 54.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 54.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 54.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 54.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 53.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 53.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 53.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 53.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 52.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 52.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 52.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 52.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 52.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 52.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 52.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 51.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 51.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 51.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 51.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 51.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 51.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 51.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 51.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 50.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 50.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 50.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 50.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 50.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 50.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 50.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 49.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 49.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 49.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 49.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 48.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 48.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 48.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 48.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 48.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 47.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 47.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 47.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 47.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 47.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 47.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 47.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 47.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 47.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 46.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 46.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 46.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 46.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 46.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 46.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 46.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 46.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 46.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 46.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 46.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 45.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 45.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 45.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 45.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 45.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 45.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 45.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 45.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 45.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 45.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 45.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 45.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 44.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 44.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 44.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 44.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 44.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 44.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 44.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 44.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 44.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 43.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 43.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 43.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 43.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 43.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 43.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 43.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 43.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 43.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 43.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 43.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 43.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 43.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 42.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 42.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 42.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 42.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 42.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 42.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 42.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 42.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 42.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 42.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 42.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 41.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 41.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 41.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 41.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 41.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 41.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 41.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 41.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 41.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 41.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 41.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 41.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 41.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 41.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 40.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 40.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 40.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 40.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 40.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 40.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 40.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 40.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 40.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 40.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 39.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 39.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 39.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 39.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 39.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 39.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 39.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 39.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 39.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 39.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 38.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 38.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 38.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 38.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 38.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 38.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 38.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 38.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 38.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 37.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 37.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 37.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 37.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 37.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 37.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 37.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 37.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 37.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 37.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 37.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 36.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 36.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 36.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 36.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 36.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 36.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 36.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 36.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 36.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 36.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 36.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 36.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 36.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 35.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 35.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 35.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 35.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 35.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 35.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 35.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 34.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 34.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 34.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 33.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 33.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 33.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 32.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 32.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 32.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 32.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 32.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 32.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 32.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 32.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 32.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 31.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 31.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 31.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 31.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 31.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 30.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 30.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 30.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 30.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 29.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 29.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 29.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 28.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 27.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 27.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 27.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 26.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 26.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 25.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 44.2
Samples: 246

Max nTPM: 111.7
Min nTPM: 21.0
Std nTPM: 12.6
Median nTPM: 42.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 111.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 89.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 87.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 84.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 83.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 78.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 78.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 75.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 74.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 73.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 71.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 70.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 68.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 68.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 65.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 63.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 63.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 62.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 61.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 60.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 60.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 60.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 59.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 59.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 59.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 59.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 58.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 58.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 57.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 57.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 57.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 57.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 56.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 56.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 56.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 55.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 55.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 53.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 53.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 53.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 53.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 53.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 52.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 52.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 52.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 52.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 52.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 51.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 51.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 51.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 51.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 50.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 50.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 49.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 49.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 49.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 49.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 49.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 49.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 49.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 48.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 48.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 48.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 48.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 48.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 48.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 48.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 48.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 48.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 48.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 47.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 47.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 47.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 47.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 47.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 46.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 46.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 46.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 46.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 46.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 46.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 46.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 46.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 46.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 46.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 45.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 45.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 45.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 45.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 45.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 45.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 45.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 45.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 45.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 45.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 45.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 45.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 45.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 45.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 45.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 45.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 44.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 44.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 44.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 44.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 44.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 44.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 44.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 44.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 44.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 44.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 44.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 44.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 43.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 43.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 43.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 43.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 43.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 43.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 43.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 43.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 43.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 42.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 42.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 42.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 42.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 42.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 42.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 42.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 42.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 42.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 42.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 42.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 41.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 41.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 41.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 41.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 41.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 41.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 41.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 41.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 40.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 40.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 40.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 40.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 39.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 39.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 39.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 39.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 39.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 39.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 39.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 39.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 39.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 39.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 38.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 38.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 38.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 38.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 38.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 38.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 38.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 38.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 38.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 38.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 38.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 38.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 38.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 37.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 37.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 37.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 37.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 37.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 37.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 37.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 37.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 36.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 36.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 36.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 36.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 36.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 36.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 36.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 36.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 36.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 36.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 36.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 36.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 35.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 35.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 35.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 35.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 35.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 35.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 35.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 35.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 35.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 35.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 34.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 34.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 34.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 34.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 34.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 34.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 34.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 34.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 33.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 33.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 33.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 33.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 33.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 32.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 32.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 32.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 32.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 32.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 32.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 31.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 31.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 31.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 31.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 30.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 29.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 29.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 29.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 29.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 28.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 28.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 28.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 28.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 27.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 27.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 26.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 26.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 25.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 25.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 25.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 25.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 24.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 24.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 24.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 24.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 22.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 21.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 21.0
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Brain - Putamen (basal ganglia)
Average nTPM: 43.3
Samples: 205

Max nTPM: 130.8
Min nTPM: 26.6
Std nTPM: 12.2
Median nTPM: 41.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 130.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 97.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 94.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 80.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 74.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 74.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 71.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 70.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 70.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 68.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 66.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 63.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 60.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 59.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 57.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 55.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 54.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 54.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 54.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 53.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 53.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 53.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 53.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 52.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 52.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 52.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 52.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 52.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 52.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 51.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 51.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 50.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 50.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 50.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 49.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 49.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 49.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 49.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 48.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 48.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 48.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 48.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 47.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 47.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 47.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 47.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 47.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 47.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 47.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 47.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 47.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 46.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 46.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 46.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 46.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 46.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 46.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 46.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 46.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 46.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 46.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 45.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 45.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 45.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 45.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 44.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 44.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 44.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 44.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 44.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 44.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 44.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 44.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 43.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 43.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 43.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 43.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 43.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 43.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 42.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 42.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 42.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 42.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 42.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 42.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 42.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 42.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 41.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 41.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 41.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 41.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 41.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 41.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 41.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 41.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 41.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 41.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 41.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 41.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 41.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 41.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 40.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 40.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 40.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 40.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 40.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 40.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 40.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 40.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 40.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 40.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 40.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 39.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 39.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 39.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 39.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 39.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 39.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 39.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 39.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 39.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 39.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 39.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 39.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 39.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 38.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 38.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 38.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 38.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 38.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 38.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 38.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 37.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 37.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 37.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 37.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 37.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 37.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 37.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 37.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 37.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 36.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 36.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 36.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 36.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 36.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 36.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 36.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 36.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 36.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 36.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 36.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 36.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 36.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 36.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 35.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 35.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 35.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 35.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 35.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 35.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 35.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 35.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 35.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 35.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 35.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 34.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 34.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 33.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 33.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 33.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 33.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 33.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 33.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 33.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 33.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 33.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 32.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 32.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 32.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 32.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 32.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 32.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 31.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 31.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 31.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 31.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 31.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 30.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 30.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 30.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 30.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 30.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 30.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 30.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 29.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 29.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 28.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 27.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 27.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 26.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1048.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 384.6
FF:10164-103B2 76 years, female 384.6
Nucleus accumbens
Scaled Tags Per Million: 1048.9
FF:10037-101F1 23-56 years, mixed 1048.9
Putamen
Scaled Tags Per Million: 606.0
FF:10176-103C5 60 years, female 606.0
Globus pallidus
Scaled Tags Per Million: 484.4
FF:10175-103C4 60 years, female 652.9
FF:10161-103A8 76 years, female 315.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

286.8
Pig sample Sample description nTPM
Caudate
nTPM: 194.1
Samples: 4

Max nTPM: 225.7
Min nTPM: 172.5
Sample A Female 172.5
Sample B Female 183.2
Sample C Male 225.7
Sample D Male 195.0
Putamen
nTPM: 249.4
Samples: 4

Max nTPM: 332.9
Min nTPM: 197.5
Sample A Female 217.0
Sample B Female 197.5
Sample C Male 332.9
Sample D Male 250.2
Septum
nTPM: 261.9
Samples: 4

Max nTPM: 471.1
Min nTPM: 174.0
Sample A Female 174.0
Sample B Female 197.3
Sample C Male 471.1
Sample D Male 205.2
Ventral pallidum
nTPM: 286.8
Samples: 4

Max nTPM: 581.2
Min nTPM: 174.8
Sample A Female 174.8
Sample B Female 199.8
Sample C Male 581.2
Sample D Male 191.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 98.8
Samples: 4

Max nTPM: 105.5
Min nTPM: 92.6
Sample A Male 92.7
Sample B Male 92.6
Sample C Female 104.5
Sample D Female 105.5
Septum
nTPM: 137.6
Samples: 4

Max nTPM: 158.9
Min nTPM: 121.4
Sample A Male 158.9
Sample B Male 121.4
Sample C Female 125.9
Sample D Female 144.3
Ventral forebrain
nTPM: 129.2
Samples: 4

Max nTPM: 153.4
Min nTPM: 111.1
Sample A Male 111.1
Sample B Male 153.4
Sample C Female 119.1
Sample D Female 133.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.8
71570737 Antisense, RP_050505_01_H06, Mouse strain C57BL/6J (56 days, male) 25.9
73834355 Antisense, RP_051212_03_G08, Mouse strain C57BL/6J (56 days, male) 13.8
Pallidum
Expression energy: 20.3
71570737 Antisense, RP_050505_01_H06, Mouse strain C57BL/6J (56 days, male) 25.4
73834355 Antisense, RP_051212_03_G08, Mouse strain C57BL/6J (56 days, male) 15.2

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