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H3-3B
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  • H3-3B
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:336.1 nTPM
HPA Brain:382.1 nTPM
GTEx:336.1 nTPM
FANTOM5:326.2 Scaled Tags Per Million
Pig:15.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042570Antibody CAB037166Antibody CAB037187Antibody CAB037221
Glial cells HighHighHighHigh
Neuronal cells HighMediumMediumMedium









BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

382.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 292.9
2481 Female, age 94, left hemisphere 377.2
1781 Male, age 74, unknown 349.6
1854 Male, age 80, left hemisphere 301.9
2290 Female, age 72, unknown 292.7
1857 Female, age 85, left hemisphere 264.8
2288 Male, age 75, left hemisphere 263.0
2289 Male, age 61, right hemisphere 257.1
2846 Female, age 79, unknown 236.5
Globus pallidus, externus
nTPM: 359.7
1996 Male, age 80, right hemisphere 548.9
2772 Female, age 79, unknown 414.5
2646 Male, age 61, right hemisphere 299.6
2395 Male, age 75, both hemispheres 280.7
2567 Female, age 72, unknown 255.0
Globus pallidus, internus
nTPM: 382.1
2778 Female, age 91, both hemispheres 421.5
2111 Female, age 85, right hemisphere 416.4
2483 Female, age 94, right hemisphere 399.2
2287 Male, age 75, right hemisphere 386.8
2566 Female, age 72, unknown 361.1
1818 Male, age 74, unknown 350.8
2037 Male, age 80, right hemisphere 339.2
Nucleus accumbens
nTPM: 294.9
2732 Male, age 80, right hemisphere 375.5
2391 Female, age 94, left hemisphere 340.7
1806 Female, age 85, left hemisphere 316.8
2698 Female, age 72, unknown 307.7
1783 Male, age 74, unknown 278.9
2286 Male, age 75, left hemisphere 271.6
1856 Female, age 91, right hemisphere 246.6
2824 Male, age 61, right hemisphere 221.9
Nucleus basalis of Meynert
nTPM: 275.6
2569 Male, age 61, both hemispheres 317.0
2484 Female, age 94, left hemisphere 296.0
2393 Male, age 80, right hemisphere 248.8
2821 Male, age 75, both hemispheres 240.4
Nucleus of the diagonal band
nTPM: 203.3
1979 Male, age 74, unknown 301.8
1812 Female, age 91, both hemispheres 234.7
2195 Female, age 85, both hemispheres 163.7
2029 Male, age 61, right hemisphere 163.3
2775 Male, age 80, right hemisphere 152.8
Putamen
nTPM: 256.9
2482 Female, age 94, left hemisphere 355.9
1937 Female, age 91, right hemisphere 278.4
2466 Female, age 79, unknown 243.3
1838 Male, age 80, right hemisphere 240.9
2489 Female, age 72, unknown 240.9
1829 Male, age 74, unknown 228.4
2647 Male, age 75, left hemisphere 210.6
Septal nuclei
nTPM: 238.8
2199 Male, age 80, right hemisphere 295.9
2394 Male, age 61, left hemisphere 287.8
2059 Female, age 85, both hemispheres 256.8
2629 Female, age 94, right hemisphere 221.6
2031 Female, age 72, unknown 214.3
2009 Female, age 91, both hemispheres 213.1
1960 Male, age 74, unknown 181.8
Stria terminalis, bed nucleus
nTPM: 216.7
1974 Female, age 91, both hemispheres 230.3
2201 Male, age 74, unknown 227.7
2486 Female, age 94, both hemispheres 192.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

336.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 313.3
Samples: 246

Max nTPM: 858.3
Min nTPM: 123.5
Std nTPM: 92.9
Median nTPM: 288.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 858.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 760.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 625.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 569.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 537.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 537.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 520.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 518.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 517.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 497.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 491.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 476.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 475.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 474.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 470.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 467.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 466.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 461.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 453.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 451.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 449.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 448.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 437.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 422.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 422.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 415.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 412.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 412.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 410.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 409.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 408.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 406.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 403.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 395.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 395.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 393.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 392.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 390.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 389.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 388.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 387.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 386.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 385.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 384.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 383.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 382.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 380.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 377.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 375.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 375.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 367.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 367.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 366.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 365.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 362.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 362.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 362.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 362.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 359.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 358.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 357.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 355.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 355.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 355.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 354.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 354.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 353.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 352.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 352.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 352.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 351.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 350.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 349.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 346.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 345.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 340.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 334.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 334.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 333.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 332.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 331.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 331.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 331.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 330.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 329.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 328.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 326.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 325.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 325.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 324.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 324.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 324.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 323.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 322.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 322.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 320.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 320.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 320.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 319.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 317.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 316.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 315.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 312.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 311.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 310.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 309.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 307.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 307.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 307.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 306.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 305.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 304.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 304.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 303.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 301.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 300.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 295.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 295.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 295.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 295.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 292.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 289.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 289.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 288.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 288.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 288.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 287.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 287.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 287.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 286.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 286.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 285.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 285.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 283.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 283.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 282.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 281.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 281.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 280.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 280.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 279.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 278.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 276.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 276.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 276.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 276.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 273.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 272.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 270.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 268.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 267.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 267.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 267.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 267.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 267.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 266.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 265.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 265.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 265.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 264.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 264.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 262.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 261.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 261.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 260.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 260.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 258.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 258.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 257.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 257.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 257.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 257.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 256.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 256.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 256.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 256.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 256.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 255.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 254.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 254.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 254.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 254.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 253.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 253.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 252.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 252.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 252.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 252.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 251.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 250.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 250.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 250.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 248.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 246.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 244.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 244.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 244.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 244.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 243.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 243.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 242.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 242.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 239.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 239.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 239.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 238.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 237.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 237.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 237.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 235.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 235.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 235.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 233.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 233.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 233.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 233.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 232.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 230.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 228.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 228.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 228.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 225.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 225.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 223.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 219.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 218.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 216.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 214.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 212.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 210.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 209.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 209.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 208.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 208.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 206.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 203.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 202.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 202.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 201.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 196.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 189.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 188.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 188.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 148.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 139.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 123.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 276.8
Samples: 246

Max nTPM: 832.7
Min nTPM: 130.9
Std nTPM: 92.8
Median nTPM: 250.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 832.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 662.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 640.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 597.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 584.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 560.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 535.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 525.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 507.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 502.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 487.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 480.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 470.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 451.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 444.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 435.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 431.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 414.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 405.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 402.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 398.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 383.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 380.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 378.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 378.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 376.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 372.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 372.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 370.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 368.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 364.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 364.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 363.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 357.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 353.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 350.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 349.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 348.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 347.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 344.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 344.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 342.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 341.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 334.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 333.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 325.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 325.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 324.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 320.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 319.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 319.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 318.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 314.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 312.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 308.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 308.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 308.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 304.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 304.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 303.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 301.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 300.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 300.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 297.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 296.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 296.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 294.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 291.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 289.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 289.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 288.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 288.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 288.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 288.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 286.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 286.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 285.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 285.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 285.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 284.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 283.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 282.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 282.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 282.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 281.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 281.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 281.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 280.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 280.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 279.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 278.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 278.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 277.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 277.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 276.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 273.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 272.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 271.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 269.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 269.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 269.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 268.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 268.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 267.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 266.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 266.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 263.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 263.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 262.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 262.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 262.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 261.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 260.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 258.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 258.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 258.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 257.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 257.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 256.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 252.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 252.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 251.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 250.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 250.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 250.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 249.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 249.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 249.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 248.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 248.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 247.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 246.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 246.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 246.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 245.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 244.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 243.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 243.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 241.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 240.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 240.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 240.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 240.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 239.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 238.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 237.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 237.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 237.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 236.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 235.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 235.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 235.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 235.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 235.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 234.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 234.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 233.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 232.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 232.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 231.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 230.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 230.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 229.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 229.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 229.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 229.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 228.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 228.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 228.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 227.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 227.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 227.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 226.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 225.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 225.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 225.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 225.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 224.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 224.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 223.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 222.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 222.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 221.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 221.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 219.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 219.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 218.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 218.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 218.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 217.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 217.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 216.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 215.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 215.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 215.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 214.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 212.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 211.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 211.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 211.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 211.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 211.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 209.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 209.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 209.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 209.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 207.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 206.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 205.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 204.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 203.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 202.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 201.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 201.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 200.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 200.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 199.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 199.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 198.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 198.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 198.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 198.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 198.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 198.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 195.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 191.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 191.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 191.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 191.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 190.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 190.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 189.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 189.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 188.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 185.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 185.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 182.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 178.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 176.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 175.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 173.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 172.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 162.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 146.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 141.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 130.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 336.1
Samples: 205

Max nTPM: 1003.5
Min nTPM: 183.5
Std nTPM: 110.8
Median nTPM: 308.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1003.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 907.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 777.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 766.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 662.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 616.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 590.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 590.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 574.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 561.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 533.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 526.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 521.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 504.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 480.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 460.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 460.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 449.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 448.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 447.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 445.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 442.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 432.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 432.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 430.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 428.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 428.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 423.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 411.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 406.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 403.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 403.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 402.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 402.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 401.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 393.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 393.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 392.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 392.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 390.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 382.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 382.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 378.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 376.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 373.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 373.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 373.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 373.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 372.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 372.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 368.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 361.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 360.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 360.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 360.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 357.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 355.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 354.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 354.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 354.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 353.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 351.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 349.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 349.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 349.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 348.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 346.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 345.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 345.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 341.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 340.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 340.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 339.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 336.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 335.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 335.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 333.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 332.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 331.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 331.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 330.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 330.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 327.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 326.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 326.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 326.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 325.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 325.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 325.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 324.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 323.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 322.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 320.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 316.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 315.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 315.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 312.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 311.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 311.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 310.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 310.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 309.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 308.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 306.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 306.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 305.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 305.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 304.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 300.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 300.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 300.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 300.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 299.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 299.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 298.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 297.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 297.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 297.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 296.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 295.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 294.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 293.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 293.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 291.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 290.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 290.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 290.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 289.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 289.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 286.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 286.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 285.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 284.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 284.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 283.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 283.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 281.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 281.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 281.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 280.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 280.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 278.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 278.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 278.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 278.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 277.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 276.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 275.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 275.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 274.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 274.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 273.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 271.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 271.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 270.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 269.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 269.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 268.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 265.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 265.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 265.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 263.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 263.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 262.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 262.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 262.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 261.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 261.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 260.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 258.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 257.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 255.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 254.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 254.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 253.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 253.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 251.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 250.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 249.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 249.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 247.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 247.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 245.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 245.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 244.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 240.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 240.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 239.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 238.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 238.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 236.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 236.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 236.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 234.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 232.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 228.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 227.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 226.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 224.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 215.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 214.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 209.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 202.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 199.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 183.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

326.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 225.5
FF:10164-103B2 76 years, female 225.5
Nucleus accumbens
Scaled Tags Per Million: 177.1
FF:10037-101F1 23-56 years, mixed 177.1
Putamen
Scaled Tags Per Million: 217.6
FF:10176-103C5 60 years, female 217.6
Globus pallidus
Scaled Tags Per Million: 326.2
FF:10175-103C4 60 years, female 343.7
FF:10161-103A8 76 years, female 308.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.5
Pig sample Sample description nTPM
Caudate
nTPM: 15.5
Samples: 4

Max nTPM: 18.0
Min nTPM: 13.7
Sample A Female 15.2
Sample B Female 13.7
Sample C Male 15.0
Sample D Male 18.0
Putamen
nTPM: 7.0
Samples: 4

Max nTPM: 10.0
Min nTPM: 3.9
Sample A Female 7.3
Sample B Female 10.0
Sample C Male 3.9
Sample D Male 6.9
Septum
nTPM: 8.2
Samples: 4

Max nTPM: 11.0
Min nTPM: 6.7
Sample A Female 7.9
Sample B Female 7.1
Sample C Male 6.7
Sample D Male 11.0
Ventral pallidum
nTPM: 9.2
Samples: 4

Max nTPM: 10.6
Min nTPM: 7.1
Sample A Female 10.6
Sample B Female 7.1
Sample C Male 9.2
Sample D Male 9.7

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