We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
H3-3B
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • H3-3B
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: High
Cells in molecular layer: High
Purkinje cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:486.3 nTPM
HPA Brain:393.3 nTPM
GTEx:486.3 nTPM
FANTOM5:372.5 Scaled Tags Per Million
Pig:9.3 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042570Antibody CAB037166Antibody CAB037187Antibody CAB037221
Purkinje cells MediumMediumNot detectedLow
Cells in granular layer HighHighMediumHigh
Cells in molecular layer HighHighHighHigh








CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

393.3
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 393.3
2101 Male, age 74, right hemisphere 505.5
2006 Male, age 61, right hemisphere 484.7
2003 Female, age 85, right hemisphere 429.5
1788 Male, age 55, unknown 427.8
1768 Female, age 72, unknown 417.2
2055 Female, age 91, right hemisphere 324.8
1774 Male, age 80, left hemisphere 301.6
1769 Male, age 76, right hemisphere 255.6
Cerebellar nuclei
nTPM: 364.3
2783 Female, age 72, unknown 478.9
2175 Male, age 61, right hemisphere 387.5
1879 Male, age 55, unknown 376.6
2005 Male, age 80, left hemisphere 375.9
2318 Male, age 74, left hemisphere 360.0
1966 Female, age 91, left hemisphere 359.6
2882 Male, age 76, left hemisphere 343.0
1871 Male, age 74, unknown 330.4
2177 Female, age 85, both hemispheres 267.1
Flocculonodular lobe
nTPM: 385.8
2004 Male, age 61, right hemisphere 603.8
1765 Male, age 55, unknown 498.3
1792 Male, age 74, unknown 456.7
2176 Female, age 91, right hemisphere 330.3
1771 Male, age 80, left hemisphere 314.5
1835 Female, age 85, right hemisphere 297.9
1767 Male, age 76, left hemisphere 199.0
Vermis
nTPM: 352.9
2460 Male, age 61, both hemispheres 536.8
1928 Female, age 72, unknown 404.2
1751 Male, age 74, right hemisphere 394.4
1988 Female, age 85, left hemisphere 389.3
1825 Male, age 74, unknown 351.0
1766 Male, age 55, unknown 343.1
1778 Female, age 91, left hemisphere 273.9
2834 Male, age 80, left hemisphere 261.7
1770 Male, age 76, left hemisphere 221.2

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

486.3
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 486.3
Samples: 215

Max nTPM: 1007.0
Min nTPM: 230.2
Std nTPM: 103.8
Median nTPM: 480.2
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 1007.0
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 958.2
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 812.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 791.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 785.8
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 703.8
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 680.2
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 679.2
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 660.1
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 656.1
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 652.9
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 651.1
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 650.3
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 649.0
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 646.4
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 645.9
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 613.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 608.5
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 607.8
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 604.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 600.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 597.2
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 595.1
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 589.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 583.1
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 582.1
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 578.7
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 577.0
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 573.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 568.5
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 568.5
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 568.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 565.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 565.3
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 564.5
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 562.1
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 560.6
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 555.2
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 553.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 553.4
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 552.8
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 552.3
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 549.9
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 548.0
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 547.9
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 546.2
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 546.0
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 545.6
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 545.5
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 545.2
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 544.2
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 542.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 540.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 538.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 536.7
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 536.1
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 533.0
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 531.8
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 527.7
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 527.1
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 526.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 526.5
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 522.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 522.6
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 520.6
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 520.0
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 518.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 517.0
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 516.3
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 515.8
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 515.5
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 512.2
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 507.0
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 506.6
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 506.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 505.7
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 502.8
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 502.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 501.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 501.3
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 500.5
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 499.5
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 499.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 498.6
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 498.3
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 497.6
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 497.5
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 495.3
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 495.0
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 494.9
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 492.6
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 491.5
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 490.9
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 490.8
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 490.1
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 489.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 489.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 489.5
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 489.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 488.4
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 487.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 485.1
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 484.5
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 483.3
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 481.3
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 480.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 480.5
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 480.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 477.8
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 477.2
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 476.5
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 472.5
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 472.5
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 472.1
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 471.7
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 471.4
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 470.4
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 469.1
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 468.7
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 467.8
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 467.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 466.3
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 465.5
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 461.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 460.0
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 459.6
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 458.0
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 457.4
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 456.9
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 456.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 456.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 456.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 455.7
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 453.3
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 449.4
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 448.8
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 447.2
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 446.6
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 446.3
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 445.5
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 443.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 443.7
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 442.6
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 441.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 440.5
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 440.1
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 440.0
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 438.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 437.2
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 434.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 434.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 434.3
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 433.3
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 432.9
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 432.7
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 432.1
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 432.0
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 430.7
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 430.6
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 429.7
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 429.5
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 429.5
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 429.1
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 426.4
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 425.6
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 424.4
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 424.0
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 423.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 423.1
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 422.6
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 422.4
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 419.8
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 419.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 418.0
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 415.7
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 414.3
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 408.8
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 407.8
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 405.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 405.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 402.4
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 399.5
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 398.7
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 397.2
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 395.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 393.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 391.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 390.4
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 390.3
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 389.3
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 387.0
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 385.2
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 384.1
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 382.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 379.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 378.7
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 377.3
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 376.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 373.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 369.1
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 366.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 354.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 353.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 338.4
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 336.1
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 327.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 318.3
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 306.7
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 305.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 295.9
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 289.7
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 238.9
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 236.3
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 234.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 230.2
Show allShow less
Brain - Cerebellum
Average nTPM: 354.3
Samples: 241

Max nTPM: 847.6
Min nTPM: 191.0
Std nTPM: 91.0
Median nTPM: 338.3
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 847.6
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 782.4
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 704.0
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 663.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 657.6
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 625.0
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 593.6
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 586.2
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 566.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 559.8
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 546.4
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 527.3
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 516.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 506.2
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 505.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 499.3
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 495.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 480.2
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 476.2
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 468.4
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 460.3
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 458.6
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 457.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 452.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 445.9
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 443.1
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 440.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 436.8
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 433.3
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 433.2
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 431.0
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 428.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 428.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 423.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 421.0
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 420.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 418.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 418.2
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 415.3
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 415.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 415.0
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 412.4
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 411.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 409.0
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 408.5
GTEX-1B933-3026-SM-731DB 50-59 years, female 406.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 405.8
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 405.0
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 404.3
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 404.2
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 403.8
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 400.1
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 399.9
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 399.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 398.7
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 396.8
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 394.1
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 391.1
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 391.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 388.9
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 388.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 386.9
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 385.2
GTEX-17EVP-2926-SM-793BU 40-49 years, male 384.1
GTEX-145LS-3026-SM-5O99S 60-69 years, female 383.7
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 382.6
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 382.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 380.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 379.6
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 377.6
GTEX-RU72-2926-SM-2TF66 50-59 years, female 376.1
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 374.3
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 374.3
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 373.5
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 373.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 373.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 371.8
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 370.6
GTEX-X261-3126-SM-4PQZC 50-59 years, male 369.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 367.7
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 367.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 366.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 361.1
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 361.0
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 359.4
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 359.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 358.8
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 357.7
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 356.3
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 355.3
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 355.1
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 355.0
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 354.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 353.7
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 351.8
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 351.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 351.1
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 349.9
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 349.7
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 349.6
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 349.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 347.8
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 347.6
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 347.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 346.9
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 346.6
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 346.0
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 345.9
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 344.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 342.8
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 342.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 341.9
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 341.5
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 341.1
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 340.8
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 339.9
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 339.8
GTEX-17HII-2926-SM-79OMK 50-59 years, male 338.8
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 338.7
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 338.4
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 338.3
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 337.8
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 337.7
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 336.9
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 335.9
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 335.5
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 335.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 333.8
GTEX-15G19-2826-SM-6M48K 60-69 years, male 332.8
GTEX-14PN4-3026-SM-664O4 50-59 years, male 332.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 332.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 330.3
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 329.9
GTEX-14ABY-3026-SM-664NE 50-59 years, male 329.6
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 328.6
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 327.4
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 327.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 326.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 326.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 325.2
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 323.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 322.7
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 321.2
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 321.1
GTEX-14E6D-2926-SM-664OP 50-59 years, male 320.5
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 320.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 320.3
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 320.2
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 319.9
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 319.8
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 319.2
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 318.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 317.3
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 317.3
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 317.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 316.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 316.5
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 316.4
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 316.3
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 315.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 314.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 314.6
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 314.3
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 313.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 312.8
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 312.0
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 309.3
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 307.4
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 307.1
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 306.7
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 306.7
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 306.2
GTEX-11EI6-2926-SM-5985U 60-69 years, male 303.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 303.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 303.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 302.8
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 302.3
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 301.8
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 300.8
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 300.6
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 300.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 300.4
GTEX-18465-2926-SM-7KFSE 50-59 years, male 299.7
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 299.4
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 297.2
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 297.1
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 295.9
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 295.6
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 292.7
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 292.6
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 291.4
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 290.8
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 290.5
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 289.1
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 288.5
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 288.3
GTEX-13112-2926-SM-5DUWT 50-59 years, male 287.0
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 286.2
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 284.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 284.2
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 281.5
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 279.9
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 278.4
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 278.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 277.7
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 277.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 277.1
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 277.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 276.6
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 275.8
GTEX-11ONC-3026-SM-5985W 60-69 years, male 275.6
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 272.9
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 271.7
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 271.2
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 270.8
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 269.5
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 266.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 263.5
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 263.3
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 262.6
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 262.1
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 262.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 259.1
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 256.2
GTEX-12126-0926-SM-5FQTW 20-29 years, male 255.0
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 254.3
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 251.1
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 247.7
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 244.0
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 242.0
GTEX-11DYG-2926-SM-5H132 60-69 years, male 240.3
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 239.9
GTEX-144GL-2926-SM-5O99F 50-59 years, male 237.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 236.6
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 236.2
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 232.7
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 228.0
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 227.2
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 217.8
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 210.1
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 191.0
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

372.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 372.5
FF:10083-102B2 22-68 years, mixed 464.4
FF:10166-103B4 76 years, female 280.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.3
Pig sample Sample description nTPM
Cerebellum
nTPM: 9.3
Samples: 4

Max nTPM: 13.8
Min nTPM: 5.8
Sample A Female 5.8
Sample B Female 7.5
Sample C Male 13.8
Sample D Male 10.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org