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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:207.5 nTPM
HPA Brain:310.4 nTPM
GTEx:207.5 nTPM
FANTOM5:1081.3 Scaled Tags Per Million
Pig:281.9 nTPM
Mouse:583.4 nTPM
Allen mouse:17.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010122Antibody HPA071006Antibody CAB001999Antibody CAB002000
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells HighHighMediumNot detected








BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

310.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 310.4
2290 Female, age 72, unknown 394.3
2846 Female, age 79, unknown 387.1
2289 Male, age 61, right hemisphere 336.4
1857 Female, age 85, left hemisphere 311.6
1781 Male, age 74, unknown 305.2
1854 Male, age 80, left hemisphere 292.2
2288 Male, age 75, left hemisphere 271.9
2481 Female, age 94, left hemisphere 184.4
Globus pallidus, externus
nTPM: 86.6
2646 Male, age 61, right hemisphere 122.0
2395 Male, age 75, both hemispheres 96.8
2567 Female, age 72, unknown 80.2
2772 Female, age 79, unknown 78.9
1996 Male, age 80, right hemisphere 55.1
Globus pallidus, internus
nTPM: 74.9
2483 Female, age 94, right hemisphere 136.1
1818 Male, age 74, unknown 84.7
2566 Female, age 72, unknown 79.9
2037 Male, age 80, right hemisphere 60.5
2287 Male, age 75, right hemisphere 58.7
2778 Female, age 91, both hemispheres 52.2
2111 Female, age 85, right hemisphere 52.0
Nucleus accumbens
nTPM: 290.9
1856 Female, age 91, right hemisphere 399.3
1783 Male, age 74, unknown 370.2
2824 Male, age 61, right hemisphere 350.3
2698 Female, age 72, unknown 333.6
1806 Female, age 85, left hemisphere 308.8
2286 Male, age 75, left hemisphere 244.1
2732 Male, age 80, right hemisphere 179.0
2391 Female, age 94, left hemisphere 141.5
Nucleus basalis of Meynert
nTPM: 229.1
2393 Male, age 80, right hemisphere 267.1
2484 Female, age 94, left hemisphere 265.6
2821 Male, age 75, both hemispheres 226.2
2569 Male, age 61, both hemispheres 157.5
Nucleus of the diagonal band
nTPM: 303.6
2195 Female, age 85, both hemispheres 345.2
2029 Male, age 61, right hemisphere 325.5
1812 Female, age 91, both hemispheres 316.6
2775 Male, age 80, right hemisphere 307.1
1979 Male, age 74, unknown 223.8
Putamen
nTPM: 304.3
1838 Male, age 80, right hemisphere 404.6
1937 Female, age 91, right hemisphere 339.3
2647 Male, age 75, left hemisphere 302.0
1829 Male, age 74, unknown 301.6
2489 Female, age 72, unknown 298.8
2466 Female, age 79, unknown 295.3
2482 Female, age 94, left hemisphere 188.3
Septal nuclei
nTPM: 265.0
2629 Female, age 94, right hemisphere 358.6
1960 Male, age 74, unknown 312.4
2009 Female, age 91, both hemispheres 269.1
2059 Female, age 85, both hemispheres 267.8
2031 Female, age 72, unknown 255.9
2394 Male, age 61, left hemisphere 203.2
2199 Male, age 80, right hemisphere 188.0
Stria terminalis, bed nucleus
nTPM: 265.7
2486 Female, age 94, both hemispheres 312.6
1974 Female, age 91, both hemispheres 273.2
2201 Male, age 74, unknown 211.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

207.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 154.9
Samples: 246

Max nTPM: 346.8
Min nTPM: 17.5
Std nTPM: 82.9
Median nTPM: 154.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 346.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 340.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 338.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 334.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 328.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 327.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 325.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 320.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 310.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 309.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 309.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 303.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 301.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 298.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 295.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 294.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 291.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 290.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 290.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 284.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 283.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 278.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 277.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 275.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 274.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 273.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 272.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 270.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 264.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 261.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 258.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 258.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 252.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 252.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 251.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 251.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 242.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 241.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 239.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 236.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 234.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 234.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 233.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 233.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 231.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 230.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 229.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 227.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 227.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 226.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 226.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 226.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 225.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 224.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 223.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 223.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 220.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 217.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 216.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 215.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 215.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 214.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 213.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 212.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 211.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 211.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 210.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 209.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 209.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 208.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 208.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 208.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 207.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 206.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 206.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 205.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 204.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 199.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 199.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 198.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 197.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 196.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 196.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 196.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 195.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 191.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 191.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 187.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 185.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 184.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 184.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 183.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 181.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 181.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 180.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 179.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 179.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 179.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 178.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 178.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 177.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 176.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 173.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 173.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 170.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 168.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 167.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 166.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 165.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 165.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 165.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 164.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 163.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 163.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 162.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 162.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 161.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 160.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 160.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 160.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 156.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 156.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 156.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 153.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 152.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 149.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 145.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 144.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 143.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 143.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 143.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 142.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 142.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 140.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 139.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 137.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 136.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 136.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 135.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 135.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 135.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 134.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 132.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 132.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 131.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 129.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 128.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 126.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 126.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 121.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 119.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 119.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 119.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 118.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 117.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 117.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 117.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 116.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 116.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 113.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 113.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 113.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 110.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 109.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 108.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 107.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 106.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 102.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 101.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 99.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 94.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 90.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 89.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 89.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 89.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 89.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 89.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 88.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 88.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 88.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 87.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 86.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 83.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 78.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 76.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 73.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 72.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 71.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 71.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 71.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 67.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 67.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 67.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 65.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 65.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 63.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 61.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 60.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 57.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 57.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 56.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 56.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 55.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 54.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 53.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 52.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 51.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 50.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 50.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 49.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 49.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 48.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 47.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 46.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 46.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 44.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 44.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 44.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 42.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 41.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 41.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 40.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 40.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 39.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 39.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 35.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 34.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 34.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 34.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 31.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 28.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 27.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 22.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 21.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 17.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 207.5
Samples: 246

Max nTPM: 412.1
Min nTPM: 17.4
Std nTPM: 97.8
Median nTPM: 229.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 412.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 409.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 381.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 379.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 365.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 362.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 361.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 359.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 358.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 353.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 350.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 344.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 341.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 340.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 340.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 339.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 338.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 336.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 335.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 335.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 333.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 330.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 329.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 326.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 325.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 323.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 321.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 318.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 318.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 315.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 314.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 312.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 311.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 310.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 310.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 309.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 307.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 306.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 304.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 303.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 302.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 302.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 302.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 301.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 300.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 300.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 298.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 295.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 295.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 293.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 293.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 293.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 290.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 289.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 288.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 286.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 285.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 285.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 285.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 281.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 280.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 277.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 277.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 277.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 276.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 276.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 276.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 274.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 274.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 273.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 273.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 271.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 271.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 270.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 270.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 270.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 269.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 269.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 269.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 269.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 268.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 265.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 265.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 262.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 262.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 262.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 261.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 261.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 261.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 261.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 260.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 259.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 257.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 256.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 255.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 255.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 254.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 253.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 252.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 252.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 252.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 250.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 247.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 246.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 246.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 245.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 245.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 243.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 243.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 241.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 240.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 239.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 238.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 236.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 235.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 235.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 232.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 232.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 231.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 231.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 230.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 230.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 230.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 229.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 226.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 225.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 225.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 224.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 224.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 222.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 222.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 220.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 218.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 218.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 215.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 213.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 212.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 210.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 208.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 208.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 205.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 205.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 204.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 202.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 201.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 200.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 200.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 199.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 198.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 198.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 198.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 197.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 195.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 192.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 186.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 183.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 179.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 177.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 176.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 173.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 168.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 167.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 167.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 165.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 164.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 164.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 161.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 161.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 161.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 160.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 160.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 159.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 156.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 156.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 155.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 154.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 146.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 144.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 143.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 142.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 141.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 139.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 133.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 132.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 127.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 124.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 121.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 121.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 118.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 117.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 117.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 116.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 116.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 102.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 99.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 97.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 93.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 91.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 85.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 85.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 82.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 82.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 78.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 78.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 76.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 76.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 75.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 74.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 73.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 70.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 67.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 66.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 65.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 65.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 64.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 64.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 62.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 60.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 58.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 58.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 58.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 57.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 53.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 52.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 52.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 51.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 51.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 50.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 48.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 48.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 46.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 43.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 43.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 39.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 39.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 37.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 37.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 35.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 35.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 33.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 32.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 32.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 26.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 24.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 22.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 17.4
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Brain - Putamen (basal ganglia)
Average nTPM: 140.3
Samples: 205

Max nTPM: 373.7
Min nTPM: 16.4
Std nTPM: 80.2
Median nTPM: 136.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 373.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 328.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 302.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 299.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 295.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 294.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 291.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 286.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 283.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 279.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 269.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 268.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 264.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 262.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 261.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 261.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 257.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 256.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 256.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 254.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 251.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 249.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 247.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 247.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 241.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 240.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 240.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 239.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 233.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 231.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 228.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 227.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 227.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 227.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 224.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 221.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 220.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 219.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 217.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 217.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 215.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 214.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 214.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 212.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 210.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 209.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 208.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 206.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 206.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 204.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 204.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 203.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 203.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 202.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 202.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 202.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 200.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 199.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 199.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 197.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 197.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 196.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 191.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 189.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 187.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 186.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 181.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 180.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 179.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 178.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 178.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 177.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 177.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 177.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 176.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 175.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 173.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 171.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 166.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 166.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 166.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 162.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 159.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 157.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 157.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 156.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 155.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 155.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 154.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 153.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 152.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 151.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 151.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 150.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 148.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 145.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 144.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 140.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 139.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 139.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 138.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 137.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 136.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 135.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 134.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 132.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 132.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 132.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 128.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 127.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 125.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 123.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 123.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 122.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 122.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 121.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 121.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 121.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 120.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 116.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 109.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 109.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 108.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 103.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 103.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 102.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 101.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 99.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 99.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 96.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 96.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 95.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 94.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 93.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 93.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 92.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 89.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 86.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 86.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 84.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 83.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 83.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 80.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 79.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 78.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 77.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 77.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 75.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 74.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 68.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 68.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 67.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 67.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 65.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 63.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 62.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 61.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 60.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 60.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 58.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 58.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 57.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 56.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 56.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 54.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 54.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 53.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 52.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 52.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 51.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 51.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 49.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 49.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 46.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 46.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 44.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 43.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 41.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 41.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 41.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 40.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 39.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 39.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 38.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 38.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 38.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 37.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 36.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 35.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 35.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 33.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 32.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 31.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 30.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 28.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 27.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 26.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 26.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 26.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 25.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 24.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 24.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 18.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 17.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 16.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1081.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 959.8
FF:10164-103B2 76 years, female 959.8
Nucleus accumbens
Scaled Tags Per Million: 676.5
FF:10037-101F1 23-56 years, mixed 676.5
Putamen
Scaled Tags Per Million: 1081.3
FF:10176-103C5 60 years, female 1081.3
Globus pallidus
Scaled Tags Per Million: 387.3
FF:10175-103C4 60 years, female 596.4
FF:10161-103A8 76 years, female 178.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

281.9
Pig sample Sample description nTPM
Caudate
nTPM: 281.9
Samples: 4

Max nTPM: 347.3
Min nTPM: 215.2
Sample A Female 215.2
Sample B Female 296.7
Sample C Male 347.3
Sample D Male 268.5
Putamen
nTPM: 246.8
Samples: 4

Max nTPM: 316.5
Min nTPM: 105.0
Sample A Female 105.0
Sample B Female 265.8
Sample C Male 316.5
Sample D Male 300.0
Septum
nTPM: 169.5
Samples: 4

Max nTPM: 204.7
Min nTPM: 132.5
Sample A Female 204.7
Sample B Female 197.4
Sample C Male 132.5
Sample D Male 143.5
Ventral pallidum
nTPM: 200.2
Samples: 4

Max nTPM: 234.8
Min nTPM: 155.8
Sample A Female 234.8
Sample B Female 207.4
Sample C Male 155.8
Sample D Male 202.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

583.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 583.4
Samples: 4

Max nTPM: 622.8
Min nTPM: 532.2
Sample A Male 567.6
Sample B Male 611.1
Sample C Female 532.2
Sample D Female 622.8
Septum
nTPM: 348.4
Samples: 4

Max nTPM: 386.7
Min nTPM: 325.6
Sample A Male 340.7
Sample B Male 386.7
Sample C Female 325.6
Sample D Female 340.4
Ventral forebrain
nTPM: 423.3
Samples: 4

Max nTPM: 454.8
Min nTPM: 395.1
Sample A Male 414.5
Sample B Male 395.1
Sample C Female 454.8
Sample D Female 428.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 17.9
68193007 Antisense, RP_040922_01_D12, Mouse strain C57BL/6J (56 days, male) 26.8
72109445 Antisense, RP_050712_04_G07, Mouse strain C57BL/6J (56 days, male) 15.4
72182975 Antisense, RP_050719_03_A03, Mouse strain C57BL/6J (56 days, male) 11.4
70918916 Antisense, RP_050712_04_G07, Mouse strain C57BL/6J (56 days, male) 9.9
Pallidum
Expression energy: 12.2
68193007 Antisense, RP_040922_01_D12, Mouse strain C57BL/6J (56 days, male) 21.7
72109445 Antisense, RP_050712_04_G07, Mouse strain C57BL/6J (56 days, male) 8.3
72182975 Antisense, RP_050719_03_A03, Mouse strain C57BL/6J (56 days, male) 6.6
70918916 Antisense, RP_050712_04_G07, Mouse strain C57BL/6J (56 days, male) 5.5

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