We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TPT1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • TPT1
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:4238.1 nTPM
GTEx:4238.1 nTPM
FANTOM5:6736.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039437Antibody HPA073929Antibody CAB008364
Squamous epithelial cells MediumMediumMedium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4238.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 4238.1
Samples: 156

Max nTPM: 7719.2
Min nTPM: 2149.9
Std nTPM: 1082.2
Median nTPM: 3991.3
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 7719.2
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 7359.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 7338.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 6881.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 6660.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 6591.1
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 6541.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 6449.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 6423.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 6135.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 5990.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 5893.9
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 5835.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 5805.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 5560.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 5544.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 5446.8
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 5422.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 5408.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 5370.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 5344.3
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 5308.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 5290.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 5260.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 5246.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 5228.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 5217.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 5208.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 5204.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 5163.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 5136.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 5104.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 5094.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 5081.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 5061.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 5013.9
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 5013.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 5010.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 4993.9
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 4978.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 4961.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 4943.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 4901.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 4842.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 4822.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 4803.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 4782.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 4758.2
GTEX-11I78-2026-SM-5987C 50-59 years, female 4724.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 4721.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 4674.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 4669.8
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 4666.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 4624.3
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 4603.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 4588.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 4588.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 4567.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 4537.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 4520.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 4516.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 4514.0
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 4496.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 4423.2
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 4380.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 4292.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 4274.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 4268.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 4160.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 4158.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 4144.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 4117.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 4116.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 4097.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 4088.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 4080.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 4005.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 3996.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 3985.8
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 3979.4
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 3970.9
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 3953.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 3936.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 3927.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 3923.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 3886.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 3864.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 3859.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 3821.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 3803.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 3794.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 3767.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 3747.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 3741.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 3738.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 3737.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 3736.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 3731.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 3683.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 3679.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 3673.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 3673.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 3643.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 3624.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 3610.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 3598.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 3597.2
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 3592.7
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 3590.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 3580.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 3536.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 3527.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 3473.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 3450.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 3448.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 3432.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 3428.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 3425.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 3423.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 3421.5
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 3417.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 3415.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 3412.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 3369.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 3366.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 3348.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 3338.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 3317.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 3302.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 3267.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 3235.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 3232.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 3211.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 3205.7
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 3202.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 3199.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 3141.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 3121.6
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 3077.4
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 3063.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 3012.5
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 3007.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 3002.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 2936.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 2894.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 2804.2
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 2708.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 2682.3
GTEX-QCQG-1226-SM-48U23 50-59 years, female 2675.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 2657.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 2648.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 2625.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 2601.6
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 2531.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 2168.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 2149.9
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

6736.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 6736.0
FF:10204-103F6 68 years, female 6736.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org