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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:192.0 nTPM
HPA Brain:296.2 nTPM
GTEx:192.0 nTPM
FANTOM5:313.0 Scaled Tags Per Million
Pig:441.8 nTPM
Mouse:532.4 nTPM
Allen mouse:1.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007925Antibody CAB010286
Glial cells HighLow
Neuronal cells HighMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

296.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 196.2
2288 Male, age 75, left hemisphere 270.3
2846 Female, age 79, unknown 205.6
2481 Female, age 94, left hemisphere 201.0
1857 Female, age 85, left hemisphere 196.4
1781 Male, age 74, unknown 191.5
1854 Male, age 80, left hemisphere 187.0
2290 Female, age 72, unknown 174.7
2289 Male, age 61, right hemisphere 142.7
Globus pallidus, externus
nTPM: 290.3
1996 Male, age 80, right hemisphere 371.2
2772 Female, age 79, unknown 355.0
2395 Male, age 75, both hemispheres 297.9
2567 Female, age 72, unknown 217.5
2646 Male, age 61, right hemisphere 209.8
Globus pallidus, internus
nTPM: 296.2
2287 Male, age 75, right hemisphere 382.2
2778 Female, age 91, both hemispheres 330.4
2037 Male, age 80, right hemisphere 303.4
1818 Male, age 74, unknown 279.9
2111 Female, age 85, right hemisphere 270.4
2483 Female, age 94, right hemisphere 256.2
2566 Female, age 72, unknown 250.9
Nucleus accumbens
nTPM: 229.8
2391 Female, age 94, left hemisphere 298.4
2286 Male, age 75, left hemisphere 282.7
2698 Female, age 72, unknown 231.5
1806 Female, age 85, left hemisphere 222.2
2732 Male, age 80, right hemisphere 217.0
1856 Female, age 91, right hemisphere 214.9
2824 Male, age 61, right hemisphere 187.7
1783 Male, age 74, unknown 183.8
Nucleus basalis of Meynert
nTPM: 200.6
2821 Male, age 75, both hemispheres 235.7
2569 Male, age 61, both hemispheres 201.8
2484 Female, age 94, left hemisphere 185.8
2393 Male, age 80, right hemisphere 178.9
Nucleus of the diagonal band
nTPM: 231.8
1812 Female, age 91, both hemispheres 255.9
2029 Male, age 61, right hemisphere 234.6
2775 Male, age 80, right hemisphere 224.7
2195 Female, age 85, both hemispheres 224.3
1979 Male, age 74, unknown 219.4
Putamen
nTPM: 185.2
2482 Female, age 94, left hemisphere 214.7
1937 Female, age 91, right hemisphere 208.5
1829 Male, age 74, unknown 195.7
2466 Female, age 79, unknown 185.8
2647 Male, age 75, left hemisphere 180.9
1838 Male, age 80, right hemisphere 167.0
2489 Female, age 72, unknown 144.1
Septal nuclei
nTPM: 227.3
2031 Female, age 72, unknown 261.3
2394 Male, age 61, left hemisphere 241.1
1960 Male, age 74, unknown 237.1
2009 Female, age 91, both hemispheres 221.2
2629 Female, age 94, right hemisphere 219.6
2059 Female, age 85, both hemispheres 209.6
2199 Male, age 80, right hemisphere 201.0
Stria terminalis, bed nucleus
nTPM: 209.6
1974 Female, age 91, both hemispheres 230.2
2201 Male, age 74, unknown 204.1
2486 Female, age 94, both hemispheres 194.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

192.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 170.3
Samples: 246

Max nTPM: 307.9
Min nTPM: 114.3
Std nTPM: 32.7
Median nTPM: 162.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 307.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 303.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 270.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 262.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 261.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 259.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 252.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 248.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 247.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 244.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 243.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 240.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 239.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 239.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 234.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 228.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 228.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 228.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 227.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 226.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 223.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 221.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 218.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 214.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 212.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 211.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 209.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 208.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 208.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 207.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 206.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 205.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 203.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 203.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 203.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 202.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 201.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 201.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 199.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 198.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 197.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 197.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 196.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 196.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 196.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 196.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 195.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 195.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 194.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 193.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 193.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 193.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 191.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 191.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 190.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 190.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 188.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 186.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 185.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 184.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 184.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 183.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 183.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 183.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 182.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 182.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 181.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 181.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 181.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 180.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 179.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 177.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 177.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 177.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 177.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 177.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 177.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 176.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 176.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 176.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 176.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 175.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 175.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 175.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 175.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 175.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 175.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 174.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 173.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 173.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 173.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 173.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 173.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 172.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 172.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 172.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 172.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 172.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 172.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 171.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 171.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 171.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 170.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 170.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 170.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 170.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 170.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 169.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 169.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 169.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 168.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 168.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 168.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 167.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 167.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 166.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 166.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 165.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 164.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 164.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 163.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 163.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 163.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 162.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 162.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 161.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 161.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 160.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 160.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 160.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 160.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 159.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 159.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 159.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 158.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 158.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 158.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 158.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 157.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 157.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 157.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 156.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 156.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 156.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 155.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 155.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 155.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 155.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 154.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 154.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 154.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 154.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 154.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 154.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 154.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 154.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 154.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 154.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 153.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 153.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 153.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 153.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 153.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 152.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 152.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 152.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 152.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 151.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 151.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 151.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 150.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 150.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 150.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 149.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 149.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 149.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 149.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 149.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 149.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 148.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 147.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 147.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 146.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 146.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 146.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 146.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 145.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 145.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 144.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 144.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 143.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 143.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 143.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 143.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 142.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 142.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 142.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 141.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 141.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 141.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 141.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 141.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 141.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 141.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 140.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 140.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 140.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 140.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 140.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 140.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 140.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 140.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 139.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 139.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 138.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 137.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 137.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 137.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 137.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 137.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 136.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 136.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 136.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 136.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 136.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 136.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 134.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 133.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 133.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 133.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 132.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 132.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 132.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 132.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 131.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 130.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 130.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 129.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 129.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 129.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 129.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 129.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 128.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 128.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 128.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 114.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 169.0
Samples: 246

Max nTPM: 511.0
Min nTPM: 94.0
Std nTPM: 43.8
Median nTPM: 158.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 511.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 415.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 333.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 325.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 278.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 259.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 252.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 248.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 244.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 244.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 243.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 240.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 233.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 230.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 225.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 224.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 223.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 223.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 222.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 221.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 220.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 219.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 218.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 217.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 217.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 216.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 214.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 210.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 210.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 209.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 209.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 209.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 209.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 208.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 207.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 205.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 204.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 203.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 203.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 202.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 201.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 198.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 198.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 195.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 195.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 195.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 195.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 194.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 193.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 193.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 192.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 192.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 190.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 190.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 187.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 187.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 187.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 186.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 185.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 183.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 183.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 182.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 181.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 181.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 180.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 179.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 179.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 179.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 179.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 178.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 178.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 178.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 177.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 177.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 177.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 177.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 176.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 175.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 175.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 175.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 174.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 173.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 172.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 172.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 171.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 171.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 171.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 171.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 170.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 170.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 170.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 170.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 170.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 170.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 170.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 168.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 168.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 167.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 167.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 167.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 166.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 166.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 165.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 165.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 164.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 164.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 164.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 164.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 163.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 163.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 163.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 162.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 162.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 162.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 162.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 161.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 161.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 161.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 160.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 160.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 159.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 158.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 158.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 158.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 157.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 157.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 156.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 156.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 156.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 156.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 156.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 156.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 156.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 155.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 155.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 155.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 154.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 154.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 154.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 154.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 153.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 153.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 153.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 153.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 153.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 152.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 152.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 152.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 152.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 152.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 152.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 152.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 151.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 151.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 151.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 151.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 151.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 151.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 151.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 150.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 150.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 150.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 150.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 150.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 149.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 149.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 149.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 148.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 148.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 148.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 148.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 147.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 147.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 147.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 146.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 146.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 146.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 145.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 145.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 145.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 145.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 144.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 144.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 144.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 144.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 144.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 144.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 143.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 143.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 142.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 142.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 141.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 141.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 141.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 141.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 141.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 141.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 140.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 140.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 140.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 139.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 139.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 139.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 138.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 137.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 137.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 136.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 136.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 135.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 135.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 134.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 134.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 134.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 133.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 133.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 133.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 132.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 132.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 132.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 132.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 132.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 132.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 131.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 131.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 129.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 129.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 126.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 126.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 125.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 124.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 123.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 121.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 121.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 121.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 120.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 120.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 120.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 119.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 118.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 118.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 117.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 116.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 116.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 115.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 110.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 94.0
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Brain - Putamen (basal ganglia)
Average nTPM: 192.0
Samples: 205

Max nTPM: 424.5
Min nTPM: 113.8
Std nTPM: 42.3
Median nTPM: 183.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 424.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 339.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 338.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 331.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 308.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 308.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 279.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 264.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 259.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 257.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 256.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 254.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 251.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 250.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 250.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 250.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 249.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 248.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 247.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 246.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 246.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 245.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 244.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 244.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 239.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 239.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 238.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 234.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 233.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 233.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 232.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 232.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 231.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 230.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 230.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 228.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 227.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 226.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 224.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 222.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 221.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 219.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 219.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 218.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 217.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 217.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 217.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 216.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 216.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 216.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 214.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 214.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 213.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 211.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 211.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 209.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 208.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 207.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 206.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 206.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 205.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 204.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 204.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 204.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 203.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 203.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 202.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 202.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 202.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 202.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 201.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 200.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 200.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 199.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 199.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 198.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 196.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 196.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 195.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 195.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 195.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 195.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 195.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 194.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 193.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 191.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 191.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 189.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 189.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 189.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 188.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 188.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 188.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 187.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 187.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 187.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 187.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 186.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 184.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 184.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 183.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 183.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 183.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 182.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 181.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 181.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 181.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 180.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 180.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 179.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 179.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 178.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 177.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 176.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 176.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 176.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 176.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 174.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 174.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 174.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 173.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 173.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 173.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 173.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 172.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 172.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 171.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 171.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 171.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 171.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 170.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 170.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 169.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 169.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 169.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 169.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 168.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 168.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 168.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 168.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 168.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 167.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 167.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 167.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 167.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 166.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 166.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 166.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 166.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 166.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 165.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 164.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 163.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 162.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 162.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 162.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 161.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 161.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 161.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 160.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 160.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 160.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 159.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 159.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 159.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 159.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 158.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 157.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 157.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 157.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 157.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 156.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 155.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 155.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 155.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 155.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 154.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 152.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 152.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 151.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 151.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 151.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 151.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 150.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 149.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 149.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 148.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 148.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 148.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 148.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 145.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 145.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 145.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 143.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 143.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 140.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 140.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 135.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 134.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 130.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 129.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 128.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 127.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 127.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 113.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

313.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 207.3
FF:10164-103B2 76 years, female 207.3
Nucleus accumbens
Scaled Tags Per Million: 256.4
FF:10037-101F1 23-56 years, mixed 256.4
Putamen
Scaled Tags Per Million: 255.3
FF:10176-103C5 60 years, female 255.3
Globus pallidus
Scaled Tags Per Million: 313.0
FF:10175-103C4 60 years, female 341.3
FF:10161-103A8 76 years, female 284.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

441.8
Pig sample Sample description nTPM
Caudate
nTPM: 341.3
Samples: 4

Max nTPM: 369.7
Min nTPM: 288.9
Sample A Female 369.7
Sample B Female 353.9
Sample C Male 352.8
Sample D Male 288.9
Putamen
nTPM: 405.0
Samples: 4

Max nTPM: 489.3
Min nTPM: 300.0
Sample A Female 489.3
Sample B Female 300.0
Sample C Male 433.8
Sample D Male 396.8
Septum
nTPM: 441.8
Samples: 4

Max nTPM: 503.2
Min nTPM: 373.3
Sample A Female 503.2
Sample B Female 373.3
Sample C Male 451.8
Sample D Male 438.8
Ventral pallidum
nTPM: 422.0
Samples: 4

Max nTPM: 468.0
Min nTPM: 386.9
Sample A Female 398.8
Sample B Female 386.9
Sample C Male 468.0
Sample D Male 434.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

532.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 351.9
Samples: 4

Max nTPM: 371.4
Min nTPM: 329.9
Sample A Male 344.5
Sample B Male 329.9
Sample C Female 371.4
Sample D Female 361.7
Septum
nTPM: 532.4
Samples: 4

Max nTPM: 574.1
Min nTPM: 463.1
Sample A Male 463.1
Sample B Male 574.1
Sample C Female 551.7
Sample D Female 540.8
Ventral forebrain
nTPM: 364.2
Samples: 4

Max nTPM: 391.1
Min nTPM: 353.8
Sample A Male 355.7
Sample B Male 353.8
Sample C Female 391.1
Sample D Female 356.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.2
1130 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 3.5
1131 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 3.1
70566163 Antisense, RP_050628_02_D11, Mouse strain C57BL/6J (56 days, male) 0.0
73931419 Antisense, RP_051214_04_E11, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 1.7
1130 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 5.2
1131 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 3.9
70566163 Antisense, RP_050628_02_D11, Mouse strain C57BL/6J (56 days, male) 0.0
73931419 Antisense, RP_051214_04_E11, Mouse strain C57BL/6J (56 days, male) 0.0

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