PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:294.1 nTPM
FANTOM5:348.5 Scaled Tags Per Million
Pig:571.9 nTPM
Mouse:528.4 nTPM
Allen mouse:1.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 294.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 218.3
2188 Female, age 91, both hemispheres 263.4
2090 Male, age 80, both hemispheres 211.7
1984 Male, age 76, both hemispheres 200.8
2301 Female, age 85, both hemispheres 197.4
Area postrema
nTPM: 216.5
2306 Male, age 80, both hemispheres 220.7
2799 Male, age 61, both hemispheres 216.4
2054 Male, age 76, both hemispheres 212.5
Dorsal cochlear nucleus
nTPM: 225.7
2802 Male, age 74, right hemisphere 273.1
2187 Female, age 91, both hemispheres 231.0
2378 Male, age 80, both hemispheres 228.5
2058 Male, age 76, both hemispheres 198.8
2370 Male, age 61, both hemispheres 197.0
Dorsal medullary reticular nucleus
nTPM: 239.1
2040 Female, age 85, both hemispheres 325.4
2373 Male, age 61, both hemispheres 212.3
2088 Male, age 76, both hemispheres 179.5
Dorsal motor vagal complex
nTPM: 215.5
2133 Female, age 91, both hemispheres 255.2
2000 Male, age 74, unknown 243.7
2844 Male, age 55, unknown 232.3
2813 Female, age 72, unknown 212.6
2797 Male, age 61, both hemispheres 211.0
2643 Male, age 74, both hemispheres 210.7
2185 Male, age 76, both hemispheres 193.8
2807 Female, age 85, both hemispheres 164.5
Dorsal tegmental nucleus
nTPM: 219.0
2083 Male, age 80, both hemispheres 252.8
2326 Male, age 74, both hemispheres 252.1
1936 Male, age 76, left hemisphere 195.3
2358 Male, age 61, both hemispheres 175.8
Dorsolateral tegmental area
nTPM: 225.7
2751 Female, age 85, both hemispheres 266.7
2654 Male, age 80, both hemispheres 255.4
2360 Male, age 74, both hemispheres 217.6
2337 Male, age 61, both hemispheres 197.2
2141 Male, age 76, both hemispheres 191.5
Gigantocellular reticular nuclei, medullary
nTPM: 250.1
2387 Female, age 91, both hemispheres 275.8
2314 Male, age 61, both hemispheres 270.0
1876 Female, age 85, both hemispheres 261.8
2022 Male, age 76, right hemisphere 236.7
2462 Male, age 74, both hemispheres 234.4
2310 Male, age 80, both hemispheres 221.8
Gigantocellular reticular nuclei, pars
nTPM: 211.5
2336 Male, age 61, both hemispheres 231.0
2084 Female, age 85, both hemispheres 221.3
2168 Male, age 76, both hemispheres 212.4
2706 Male, age 80, both hemispheres 198.6
2330 Male, age 80, both hemispheres 194.3
Inferior olive
nTPM: 294.1
2085 Female, age 85, both hemispheres 429.8
2563 Male, age 74, both hemispheres 319.2
2178 Male, age 61, both hemispheres 255.1
2379 Male, age 80, both hemispheres 247.2
2628 Female, age 91, both hemispheres 218.9
Kolliker-Fuse nucleus
nTPM: 238.8
2793 Female, age 91, left hemisphere 281.9
2163 Male, age 80, both hemispheres 231.7
2315 Male, age 76, right hemisphere 202.9
Lateral lemniscal nuclei
nTPM: 243.3
2320 Female, age 91, left hemisphere 254.3
2453 Male, age 74, right hemisphere 254.0
2036 Male, age 80, both hemispheres 240.2
2746 Female, age 85, left hemisphere 236.0
2169 Male, age 76, both hemispheres 231.8
Lateral medullary reticular nucleus
nTPM: 259.8
2305 Male, age 74, both hemispheres 289.2
2190 Female, age 85, both hemispheres 284.5
2044 Male, age 76, both hemispheres 271.3
2374 Male, age 61, both hemispheres 263.8
2852 Male, age 80, both hemispheres 227.9
2804 Female, age 91, both hemispheres 222.0
Lateral parabrachial nucleus
nTPM: 241.0
2792 Male, age 76, both hemispheres 267.3
2013 Male, age 80, both hemispheres 247.3
2790 Male, age 61, both hemispheres 231.0
2139 Female, age 85, right hemisphere 218.3
Lateral vestibular nucleus
nTPM: 206.9
2184 Male, age 76, both hemispheres 214.0
2311 Male, age 80, both hemispheres 199.8
Locus coeruleus
nTPM: 285.4
2014 Male, age 55, unknown 317.9
1980 Male, age 76, both hemispheres 295.9
2123 Female, age 91, both hemispheres 295.7
2788 Male, age 74, unknown 289.4
2720 Male, age 74, both hemispheres 288.7
2317 Female, age 72, unknown 261.0
2162 Male, age 80, both hemispheres 248.9
Medial olivary nucleus
nTPM: 232.4
1943 Male, age 61, both hemispheres 254.8
1962 Male, age 76, both hemispheres 228.2
2138 Female, age 91, both hemispheres 224.2
2851 Male, age 80, both hemispheres 222.5
Medial parabrachial nucleus
nTPM: 232.4
2463 Female, age 85, right hemisphere 253.9
2170 Female, age 91, both hemispheres 251.0
2854 Male, age 80, both hemispheres 237.5
2156 Male, age 61, both hemispheres 210.9
2786 Male, age 76, both hemispheres 208.7
Medial periolivary nuclei
nTPM: 239.4
2791 Male, age 74, right hemisphere 267.9
2063 Male, age 76, both hemispheres 242.8
2081 Male, age 80, both hemispheres 238.3
2171 Female, age 85, both hemispheres 224.7
2458 Female, age 91, both hemispheres 223.0
Medial vestibular nucleus
nTPM: 239.0
2803 Female, age 91, both hemispheres 278.2
2801 Male, age 74, both hemispheres 260.0
2093 Male, age 80, both hemispheres 233.5
2743 Female, age 85, both hemispheres 227.7
2134 Male, age 76, both hemispheres 222.1
2624 Male, age 61, both hemispheres 212.7
Motor facial nucleus
nTPM: 232.9
2365 Male, age 74, right hemisphere 273.5
2062 Male, age 76, both hemispheres 237.1
2126 Male, age 61, both hemispheres 232.2
2697 Female, age 85, both hemispheres 230.8
2795 Female, age 91, both hemispheres 222.1
2327 Male, age 80, both hemispheres 202.0
Motor hypoglossal nucleus
nTPM: 227.7
2125 Female, age 91, both hemispheres 261.6
2132 Female, age 85, both hemispheres 243.5
2461 Male, age 61, both hemispheres 220.9
2182 Male, age 80, both hemispheres 209.8
2277 Male, age 76, both hemispheres 202.6
Motor trigeminal nucleus
nTPM: 213.9
2560 Male, age 74, both hemispheres 271.5
2079 Male, age 80, both hemispheres 211.4
2321 Female, age 91, both hemispheres 199.5
2309 Male, age 76, both hemispheres 196.7
2335 Male, age 61, both hemispheres 190.4
Nuclei of the trapezoid body
nTPM: 239.3
2159 Male, age 61, both hemispheres 277.4
1983 Male, age 76, both hemispheres 239.7
2166 Male, age 80, both hemispheres 231.9
2368 Female, age 91, both hemispheres 224.8
2735 Female, age 85, both hemispheres 222.6
Nucleus ambiguus
nTPM: 253.9
2071 Male, age 76, both hemispheres 268.9
2096 Female, age 85, both hemispheres 238.9
Nucleus cuneatus
nTPM: 212.8
2564 Male, age 74, both hemispheres 258.7
2380 Male, age 80, both hemispheres 235.0
2562 Male, age 61, both hemispheres 232.4
2376 Male, age 61, both hemispheres 226.0
2381 Male, age 80, both hemispheres 215.2
2131 Male, age 76, both hemispheres 201.8
2808 Female, age 85, both hemispheres 193.5
2100 Male, age 76, both hemispheres 183.2
2805 Female, age 91, both hemispheres 169.7
Nucleus gracilis
nTPM: 229.7
2627 Male, age 74, both hemispheres 256.3
2382 Male, age 80, both hemispheres 252.1
2299 Female, age 85, both hemispheres 180.7
Nucleus raphe magnus
nTPM: 252.2
2459 Female, age 91, both hemispheres 269.8
2051 Male, age 76, both hemispheres 265.8
2455 Male, age 74, both hemispheres 262.0
2160 Male, age 61, both hemispheres 260.7
2328 Male, age 80, both hemispheres 237.7
2172 Female, age 85, both hemispheres 217.0
Nucleus raphe obscurus
nTPM: 283.4
2845 Female, age 85, midline 344.8
2800 Male, age 61, midline 302.4
2142 Male, age 76, midline 203.0
Nucleus raphe pallidus
nTPM: 256.4
1924 Male, age 61, midline 295.2
2183 Male, age 80, midline 261.5
2145 Male, age 76, midline 212.5
Nucleus tractus solitarii
nTPM: 208.4
2144 Female, age 91, right hemisphere 241.1
2656 Male, age 76, both hemispheres 233.2
2191 Female, age 85, both hemispheres 183.8
2307 Male, age 80, both hemispheres 175.4
Paramedian reticular nucleus
nTPM: 259.0
2050 Female, age 85, both hemispheres 275.7
2057 Male, age 80, both hemispheres 256.6
2313 Male, age 61, both hemispheres 256.1
2052 Male, age 76, both hemispheres 247.7
Parvicellular reticular nuclei
nTPM: 229.8
2119 Male, age 80, both hemispheres 243.3
2558 Male, age 74, both hemispheres 239.5
2095 Male, age 76, both hemispheres 206.6
Parvicellular reticular nuclei, medullary
nTPM: 233.8
2189 Female, age 91, both hemispheres 249.6
2091 Female, age 85, both hemispheres 234.3
2181 Male, age 80, left hemisphere 217.6
Pedunculopontine tegmental nucleus
nTPM: 238.6
2334 Male, age 80, both hemispheres 276.0
1921 Female, age 85, both hemispheres 238.1
2338 Male, age 61, both hemispheres 201.7
Peritrigeminal nucleus
nTPM: 228.4
2179 Male, age 61, both hemispheres 233.2
2067 Female, age 85, both hemispheres 231.1
2136 Male, age 76, both hemispheres 221.0
Pontine nuclei
nTPM: 277.7
2454 Male, age 74, left hemisphere 354.7
2727 Male, age 61, right hemisphere 294.7
2109 Female, age 72, unknown 290.4
1863 Male, age 55, unknown 285.6
2319 Female, age 91, both hemispheres 268.9
2787 Female, age 85, both hemispheres 264.3
1968 Male, age 76, left hemisphere 246.2
2115 Male, age 80, left hemisphere 217.0
Pontine raphe nucleus
nTPM: 244.4
2122 Female, age 85, midline 244.9
2853 Male, age 76, midline 243.8
Posteroventral cochlear nucleus
nTPM: 236.1
2341 Male, age 80, both hemispheres 261.9
2135 Female, age 91, both hemispheres 248.3
2752 Female, age 85, both hemispheres 235.2
2070 Male, age 76, both hemispheres 230.1
2371 Male, age 61, both hemispheres 204.9
Prepositus hypoglossal nucleus
nTPM: 222.2
2855 Female, age 85, right hemisphere 243.3
2086 Male, age 80, both hemispheres 201.2
Principal sensory trigeminal nucleus
nTPM: 225.3
2367 Female, age 91, left hemisphere 245.6
2158 Male, age 61, both hemispheres 237.4
2008 Male, age 80, left hemisphere 223.0
2324 Male, age 76, both hemispheres 195.1
Reticular pontine nucleus, caudal
nTPM: 255.7
2457 Female, age 91, both hemispheres 287.6
2559 Male, age 74, both hemispheres 277.0
2092 Male, age 76, both hemispheres 241.0
2332 Male, age 80, right hemisphere 217.2
Reticular pontine nucleus, oral
nTPM: 271.2
2361 Male, age 74, both hemispheres 330.7
2012 Female, age 85, both hemispheres 270.3
1939 Male, age 80, both hemispheres 264.3
2366 Female, age 91, both hemispheres 263.4
2167 Male, age 76, both hemispheres 227.6
Reticulotegmental nucleus
nTPM: 231.1
2452 Male, age 74, both hemispheres 256.9
2322 Female, age 91, both hemispheres 240.9
2333 Male, age 80, both hemispheres 228.3
2325 Male, age 76, both hemispheres 198.3
Spinal trigeminal nucleus, caudal
nTPM: 227.6
2390 Female, age 91, both hemispheres 263.1
2447 Male, age 76, both hemispheres 225.8
2312 Male, age 61, both hemispheres 222.6
2308 Male, age 80, both hemispheres 218.5
2642 Male, age 74, both hemispheres 208.1
Spinal trigeminal nucleus, interpolar
nTPM: 244.5
2033 Male, age 80, both hemispheres 266.7
2389 Female, age 91, both hemispheres 251.1
2625 Male, age 61, both hemispheres 246.1
2386 Female, age 85, both hemispheres 238.1
2066 Male, age 76, right hemisphere 220.5
Spinal trigeminal nucleus, oral
nTPM: 226.3
2737 Female, age 85, both hemispheres 236.3
2164 Male, age 80, both hemispheres 229.3
1978 Male, age 76, both hemispheres 213.5
Spinal vestibular nucleus
nTPM: 236.0
2384 Male, age 74, both hemispheres 260.1
2186 Female, age 91, both hemispheres 246.8
2806 Female, age 85, both hemispheres 245.3
2780 Male, age 80, both hemispheres 235.5
2748 Male, age 76, both hemispheres 234.6
2796 Male, age 61, both hemispheres 193.4
Subcoeruleus area
nTPM: 236.6
2369 Female, age 85, left hemisphere 288.0
1958 Male, age 80, both hemispheres 244.8
2323 Female, age 91, left hemisphere 231.0
2451 Male, age 74, both hemispheres 226.1
2089 Male, age 76, left hemisphere 193.3
Superior olive
nTPM: 251.1
2364 Male, age 74, right hemisphere 284.8
2020 Male, age 76, both hemispheres 265.9
1875 Female, age 85, both hemispheres 259.6
2329 Male, age 80, right hemisphere 223.7
2561 Female, age 91, both hemispheres 221.4
Superior vestibular nucleus
nTPM: 226.1
2383 Male, age 74, both hemispheres 249.3
2015 Male, age 80, both hemispheres 232.5
2061 Male, age 76, both hemispheres 196.6
Ventral medullary reticular nucleus
nTPM: 253.5
2372 Male, age 61, both hemispheres 292.9
2060 Male, age 76, both hemispheres 214.2
Ventral periolivary nuclei
nTPM: 222.8
2023 Male, age 76, both hemispheres 278.7
2165 Male, age 80, both hemispheres 233.3
2130 Female, age 85, both hemispheres 193.4
2794 Female, age 91, left hemisphere 185.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 246.4
2180 Male, age 61, both hemispheres 269.5
2118 Male, age 80, both hemispheres 257.8
2741 Female, age 85, both hemispheres 248.3
1986 Male, age 76, both hemispheres 229.7
2302 Female, age 91, both hemispheres 226.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 245.4
2840 Female, age 85, both hemispheres 261.2
2449 Male, age 74, both hemispheres 260.9
2456 Female, age 91, both hemispheres 243.8
1959 Male, age 76, both hemispheres 241.9
2359 Male, age 61, both hemispheres 236.0
2161 Male, age 80, both hemispheres 228.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 348.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 282.0
FF:10165-103B3 76 years, female 282.6
FF:10182-103D2 60 years, female 281.3
Medulla oblongata
Scaled Tags Per Million: 242.2
FF:10038-101F2 18-64 years, mixed 300.5
FF:10155-103A2 76 years, female 232.2
FF:10174-103C3 60 years, female 193.9
Pons
Scaled Tags Per Million: 348.5
FF:10033-101E6 18-54 years, mixed 348.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 571.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 571.9
Samples: 4

Max nTPM: 709.2
Min nTPM: 456.0
Sample A Female 565.6
Sample B Female 456.0
Sample C Male 556.7
Sample D Male 709.2
Pons
nTPM: 515.1
Samples: 4

Max nTPM: 574.9
Min nTPM: 411.9
Sample A Female 525.3
Sample B Female 411.9
Sample C Male 548.2
Sample D Male 574.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 528.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 528.4
Samples: 4

Max nTPM: 557.4
Min nTPM: 502.2
Sample A Male 512.1
Sample B Male 502.2
Sample C Female 541.8
Sample D Female 557.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.8
1131 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 6.8
1130 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 5.2
70566163 Antisense, RP_050628_02_D11, Mouse strain C57BL/6J (56 days, male) 0.3
1132 Sense, RPS_Baylor_37069, Mouse strain C57BL/6J (56 days, male) 0.0
73931419 Antisense, RP_051214_04_E11, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 1.4
1130 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 5.7
1131 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 5.6
1132 Sense, RPS_Baylor_37069, Mouse strain C57BL/6J (56 days, male) 0.0
70566163 Antisense, RP_050628_02_D11, Mouse strain C57BL/6J (56 days, male) 0.0
73931419 Antisense, RP_051214_04_E11, Mouse strain C57BL/6J (56 days, male) 0.0

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