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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:313.7 nTPM
HPA Brain:262.1 nTPM
GTEx:313.7 nTPM
FANTOM5:15.8 Scaled Tags Per Million
Pig:224.9 nTPM
Mouse:286.7 nTPM
Allen mouse:18.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001609Antibody HPA001666Antibody CAB010894
Glial cells HighHighHigh
Neuronal cells High-High







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

262.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 178.1
2846 Female, age 79, unknown 222.7
1854 Male, age 80, left hemisphere 202.6
1857 Female, age 85, left hemisphere 194.2
2290 Female, age 72, unknown 177.7
2481 Female, age 94, left hemisphere 174.6
2288 Male, age 75, left hemisphere 170.7
1781 Male, age 74, unknown 161.2
2289 Male, age 61, right hemisphere 120.8
Globus pallidus, externus
nTPM: 262.1
2395 Male, age 75, both hemispheres 306.3
2567 Female, age 72, unknown 279.8
2646 Male, age 61, right hemisphere 255.3
1996 Male, age 80, right hemisphere 239.3
2772 Female, age 79, unknown 229.9
Globus pallidus, internus
nTPM: 259.3
2483 Female, age 94, right hemisphere 339.8
2287 Male, age 75, right hemisphere 331.2
2566 Female, age 72, unknown 265.0
2111 Female, age 85, right hemisphere 233.0
2778 Female, age 91, both hemispheres 228.9
1818 Male, age 74, unknown 210.9
2037 Male, age 80, right hemisphere 206.4
Nucleus accumbens
nTPM: 190.8
2698 Female, age 72, unknown 246.9
2391 Female, age 94, left hemisphere 234.6
1856 Female, age 91, right hemisphere 200.3
2732 Male, age 80, right hemisphere 185.5
1783 Male, age 74, unknown 174.0
1806 Female, age 85, left hemisphere 169.4
2824 Male, age 61, right hemisphere 159.7
2286 Male, age 75, left hemisphere 155.7
Nucleus basalis of Meynert
nTPM: 228.8
2569 Male, age 61, both hemispheres 282.0
2393 Male, age 80, right hemisphere 215.9
2821 Male, age 75, both hemispheres 215.1
2484 Female, age 94, left hemisphere 202.4
Nucleus of the diagonal band
nTPM: 176.6
1979 Male, age 74, unknown 187.9
1812 Female, age 91, both hemispheres 186.3
2775 Male, age 80, right hemisphere 182.3
2195 Female, age 85, both hemispheres 168.7
2029 Male, age 61, right hemisphere 157.9
Putamen
nTPM: 194.5
2647 Male, age 75, left hemisphere 221.5
1829 Male, age 74, unknown 220.6
2466 Female, age 79, unknown 192.6
1838 Male, age 80, right hemisphere 192.5
2489 Female, age 72, unknown 187.2
1937 Female, age 91, right hemisphere 173.8
2482 Female, age 94, left hemisphere 173.0
Septal nuclei
nTPM: 179.5
2199 Male, age 80, right hemisphere 210.7
2394 Male, age 61, left hemisphere 199.6
2031 Female, age 72, unknown 188.3
2009 Female, age 91, both hemispheres 176.9
2629 Female, age 94, right hemisphere 167.2
1960 Male, age 74, unknown 164.2
2059 Female, age 85, both hemispheres 149.3
Stria terminalis, bed nucleus
nTPM: 170.3
2201 Male, age 74, unknown 191.1
1974 Female, age 91, both hemispheres 183.6
2486 Female, age 94, both hemispheres 136.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

313.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 287.7
Samples: 246

Max nTPM: 615.4
Min nTPM: 202.3
Std nTPM: 54.6
Median nTPM: 275.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 615.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 458.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 431.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 430.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 416.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 405.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 405.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 398.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 397.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 393.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 393.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 392.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 391.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 384.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 384.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 381.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 375.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 374.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 371.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 370.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 366.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 363.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 362.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 356.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 355.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 354.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 354.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 351.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 351.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 349.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 349.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 348.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 347.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 346.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 346.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 345.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 340.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 340.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 338.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 335.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 334.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 333.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 333.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 332.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 332.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 331.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 331.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 330.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 330.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 329.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 328.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 327.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 327.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 324.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 323.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 321.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 320.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 320.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 320.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 319.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 319.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 318.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 317.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 317.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 316.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 315.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 315.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 314.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 314.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 313.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 311.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 311.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 310.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 310.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 310.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 310.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 309.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 309.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 308.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 306.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 306.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 305.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 305.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 305.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 305.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 302.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 302.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 301.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 301.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 300.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 299.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 295.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 293.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 293.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 293.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 292.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 292.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 291.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 291.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 291.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 291.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 288.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 288.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 288.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 287.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 287.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 286.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 286.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 285.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 284.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 284.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 284.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 283.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 282.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 282.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 281.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 281.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 280.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 278.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 277.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 277.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 276.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 276.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 275.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 274.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 274.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 274.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 274.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 273.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 273.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 272.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 272.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 272.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 271.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 271.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 271.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 269.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 269.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 267.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 267.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 267.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 266.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 265.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 265.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 264.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 264.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 263.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 263.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 262.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 262.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 262.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 262.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 262.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 262.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 261.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 260.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 260.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 260.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 259.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 258.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 258.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 258.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 258.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 257.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 256.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 256.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 256.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 256.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 255.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 255.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 255.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 254.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 254.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 254.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 253.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 253.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 253.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 253.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 253.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 253.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 252.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 252.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 251.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 250.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 249.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 249.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 249.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 249.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 249.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 247.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 247.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 245.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 245.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 245.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 245.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 242.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 242.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 242.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 241.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 241.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 241.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 240.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 240.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 240.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 239.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 239.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 239.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 239.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 238.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 238.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 238.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 237.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 236.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 234.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 233.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 233.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 232.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 230.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 229.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 228.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 228.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 228.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 225.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 225.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 223.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 222.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 221.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 220.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 220.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 219.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 219.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 218.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 218.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 218.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 216.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 215.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 214.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 213.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 211.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 208.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 207.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 206.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 206.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 204.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 203.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 202.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 308.9
Samples: 246

Max nTPM: 596.9
Min nTPM: 180.6
Std nTPM: 68.6
Median nTPM: 292.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 596.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 578.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 556.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 550.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 546.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 522.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 519.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 508.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 498.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 455.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 454.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 451.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 448.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 441.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 440.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 439.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 431.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 429.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 425.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 412.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 409.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 408.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 400.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 397.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 394.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 392.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 390.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 390.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 389.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 385.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 383.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 373.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 370.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 370.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 368.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 364.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 362.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 360.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 360.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 359.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 357.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 357.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 356.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 354.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 351.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 350.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 349.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 342.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 341.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 339.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 338.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 337.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 337.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 335.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 335.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 334.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 334.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 334.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 334.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 333.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 331.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 331.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 331.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 330.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 329.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 327.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 325.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 323.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 323.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 323.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 322.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 320.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 319.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 319.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 319.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 318.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 318.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 317.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 317.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 315.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 315.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 315.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 314.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 314.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 313.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 312.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 312.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 312.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 312.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 311.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 311.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 310.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 310.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 307.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 306.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 304.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 304.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 304.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 303.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 303.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 303.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 303.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 303.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 302.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 300.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 300.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 299.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 299.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 299.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 299.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 298.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 298.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 297.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 296.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 295.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 294.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 294.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 294.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 294.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 294.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 293.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 293.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 293.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 292.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 292.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 291.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 291.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 290.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 290.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 290.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 290.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 290.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 289.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 289.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 288.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 288.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 288.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 288.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 288.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 287.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 286.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 286.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 286.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 285.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 285.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 284.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 283.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 282.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 282.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 281.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 281.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 281.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 280.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 280.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 279.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 279.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 278.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 278.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 278.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 277.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 277.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 276.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 275.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 274.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 273.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 273.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 272.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 272.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 271.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 271.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 271.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 271.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 270.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 270.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 270.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 270.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 270.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 269.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 269.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 268.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 268.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 267.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 266.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 266.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 266.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 266.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 266.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 265.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 265.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 264.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 264.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 262.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 261.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 261.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 260.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 260.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 259.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 259.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 258.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 258.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 258.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 257.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 256.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 256.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 254.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 253.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 253.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 253.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 253.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 252.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 252.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 252.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 252.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 251.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 251.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 250.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 250.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 249.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 249.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 246.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 246.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 246.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 245.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 243.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 242.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 241.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 240.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 239.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 238.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 238.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 238.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 237.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 235.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 234.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 232.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 231.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 225.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 224.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 220.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 218.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 217.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 212.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 211.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 200.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 188.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 180.6
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Brain - Putamen (basal ganglia)
Average nTPM: 313.7
Samples: 205

Max nTPM: 627.2
Min nTPM: 153.8
Std nTPM: 72.3
Median nTPM: 303.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 627.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 615.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 590.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 526.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 506.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 487.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 475.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 468.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 459.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 457.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 454.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 450.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 441.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 439.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 435.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 435.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 427.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 427.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 426.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 421.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 420.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 418.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 401.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 399.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 395.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 386.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 386.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 382.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 380.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 373.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 372.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 371.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 370.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 367.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 367.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 364.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 364.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 359.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 356.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 356.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 355.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 354.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 351.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 350.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 350.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 345.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 345.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 343.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 342.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 341.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 341.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 339.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 339.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 336.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 336.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 335.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 332.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 329.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 329.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 329.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 329.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 329.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 328.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 327.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 326.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 324.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 323.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 323.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 320.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 319.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 319.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 319.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 318.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 317.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 316.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 315.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 315.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 314.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 311.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 310.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 310.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 310.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 310.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 310.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 309.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 309.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 309.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 309.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 309.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 308.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 308.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 308.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 308.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 308.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 307.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 307.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 306.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 306.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 305.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 305.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 304.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 303.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 303.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 302.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 301.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 301.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 301.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 300.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 298.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 296.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 296.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 295.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 295.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 295.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 294.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 294.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 293.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 293.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 292.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 291.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 291.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 289.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 288.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 287.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 287.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 287.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 286.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 285.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 285.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 285.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 285.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 282.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 282.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 280.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 280.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 280.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 280.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 278.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 278.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 277.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 276.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 275.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 275.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 275.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 275.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 274.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 274.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 273.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 272.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 271.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 271.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 271.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 268.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 268.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 268.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 266.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 265.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 264.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 263.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 261.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 261.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 260.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 258.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 257.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 257.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 255.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 254.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 253.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 252.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 252.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 251.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 250.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 248.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 248.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 246.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 246.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 246.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 243.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 240.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 240.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 239.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 239.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 238.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 237.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 236.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 235.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 235.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 234.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 234.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 231.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 231.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 231.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 231.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 231.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 228.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 228.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 227.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 227.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 225.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 220.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 220.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 213.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 212.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 204.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 153.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

15.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 10.5
FF:10164-103B2 76 years, female 10.5
Nucleus accumbens
Scaled Tags Per Million: 15.8
FF:10037-101F1 23-56 years, mixed 15.8
Putamen
Scaled Tags Per Million: 15.7
FF:10176-103C5 60 years, female 15.7
Globus pallidus
Scaled Tags Per Million: 13.1
FF:10175-103C4 60 years, female 14.9
FF:10161-103A8 76 years, female 11.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

224.9
Pig sample Sample description nTPM
Caudate
nTPM: 201.6
Samples: 4

Max nTPM: 227.4
Min nTPM: 176.0
Sample A Female 214.2
Sample B Female 188.7
Sample C Male 227.4
Sample D Male 176.0
Putamen
nTPM: 224.9
Samples: 4

Max nTPM: 263.7
Min nTPM: 200.4
Sample A Female 213.8
Sample B Female 200.4
Sample C Male 263.7
Sample D Male 221.7
Septum
nTPM: 218.1
Samples: 4

Max nTPM: 252.4
Min nTPM: 197.8
Sample A Female 252.4
Sample B Female 198.8
Sample C Male 223.5
Sample D Male 197.8
Ventral pallidum
nTPM: 212.8
Samples: 4

Max nTPM: 222.1
Min nTPM: 203.4
Sample A Female 216.8
Sample B Female 222.1
Sample C Male 203.4
Sample D Male 209.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

286.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 243.4
Samples: 4

Max nTPM: 259.0
Min nTPM: 218.7
Sample A Male 239.6
Sample B Male 218.7
Sample C Female 259.0
Sample D Female 256.2
Septum
nTPM: 286.6
Samples: 4

Max nTPM: 296.1
Min nTPM: 277.4
Sample A Male 277.4
Sample B Male 296.1
Sample C Female 285.5
Sample D Female 287.5
Ventral forebrain
nTPM: 228.7
Samples: 4

Max nTPM: 244.4
Min nTPM: 213.2
Sample A Male 213.2
Sample B Male 229.9
Sample C Female 244.4
Sample D Female 227.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 18.1
71232800 Antisense, RP_050503_02_A03, Mouse strain C57BL/6J (56 days, male) 18.1
Pallidum
Expression energy: 16.5
71232800 Antisense, RP_050503_02_A03, Mouse strain C57BL/6J (56 days, male) 16.5

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