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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
254.4
nTPM
GTEx:
254.4
nTPM
FANTOM5:
11.5
Scaled Tags Per Million
Pig:
142.1
nTPM
Mouse:
419.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
254.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 254.4
Samples: 105
Max nTPM: 431.7
Min nTPM: 114.1
Std nTPM: 58.1
Median nTPM:
495_1
57 years, female
431.7
413_1
59 years, female
404.7
466_1
57 years, female
391.0
501_1
88 years, male
362.9
414_1
84 years, female
355.2
17_1
71 years, male
349.9
415_1
77 years, female
344.9
126_1
63 years, male
331.3
139_1
64 years, female
328.8
153_1
70 years, female
323.0
149_1
88 years, male
321.6
266_1
85 years, male
315.8
246_1
77 years, male
314.7
254_1
77 years, female
314.3
137_1
83 years, male
313.9
518_1
75 years, female
313.9
81_1
67 years, male
310.9
315_1
62 years, female
307.3
142_1
61 years, female
305.9
499_1
55 years, female
303.0
18_1
88 years, male
302.6
377_1
82 years, female
301.2
189_1
76 years, male
298.9
308_1
70 years, female
297.4
109_1
81 years, female
295.5
526_1
61 years, male
294.6
468_1
89 years, male
292.7
32_1
67 years, male
291.4
2_1
77 years, female
291.2
288_1
66 years, female
290.2
324_1
76 years, male
289.5
162_1
79 years, female
286.9
120_1
70 years, female
286.7
491_1
89 years, female
284.9
43_1
64 years, female
281.8
316_1
62 years, male
277.3
404_1
82 years, female
273.5
6_1
73 years, female
272.4
265_1
87 years, male
269.9
115_1
83 years, male
269.5
322_1
76 years, male
269.3
313_1
79 years, female
268.3
307_1
66 years, female
268.2
480_1
63 years, male
267.8
89_1
63 years, male
267.3
348_1
84 years, male
265.7
320_1
89 years, female
263.1
293_1
68 years, female
261.4
145_1
84 years, male
261.1
4_1
88 years, female
260.5
376_1
75 years, female
259.4
9_1
66 years, female
258.2
517_1
88 years, male
257.0
425_1
59 years, female
250.6
311_1
78 years, male
249.4
117_1
61 years, male
249.2
292_1
71 years, male
248.3
35_1
74 years, female
247.5
177_1
74 years, male
247.5
405_1
91 years, male
247.0
503_1
68 years, male
247.0
286_1
68 years, female
243.9
490_1
67 years, female
243.2
379_1
60 years, male
242.8
389_1
86 years, female
238.7
251_1
78 years, male
236.9
321_1
62 years, female
235.1
452_1
88 years, female
233.3
229_1
69 years, female
232.2
335_1
73 years, female
225.1
396_1
62 years, male
224.7
406_1
79 years, male
221.8
317_1
60 years, male
220.3
318_1
68 years, male
219.7
314_1
67 years, male
218.6
163_1
78 years, male
216.5
217_1
76 years, male
216.1
394_1
75 years, female
214.4
319_1
81 years, male
212.7
384_1
83 years, male
212.7
264_1
73 years, female
210.3
291_1
76 years, male
208.8
350_1
84 years, female
206.3
243_1
75 years, male
203.9
349_1
83 years, male
202.0
119_1
70 years, female
198.1
386_1
76 years, male
195.3
352_1
62 years, male
193.3
295_1
61 years, female
192.6
173_1
67 years, male
189.5
351_1
91 years, male
187.8
375_1
74 years, female
187.4
41_1
94 years, female
185.9
42_1
85 years, male
181.7
506_1
65 years, male
175.9
172_1
72 years, female
174.8
354_1
81 years, female
174.4
237_1
82 years, male
173.1
353_1
82 years, female
171.5
447_1
81 years, male
171.0
356_1
87 years, female
158.9
355_1
70 years, female
152.8
347_1
72 years, male
146.5
99_1
64 years, male
141.9
218_1
71 years, female
114.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.