PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:269.6 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Pig:221.1 nTPM
Mouse:180.5 nTPM
Allen mouse:14.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 269.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 234.5
2188 Female, age 91, both hemispheres 266.3
2090 Male, age 80, both hemispheres 238.7
2301 Female, age 85, both hemispheres 223.9
1984 Male, age 76, both hemispheres 208.9
Area postrema
nTPM: 238.1
2799 Male, age 61, both hemispheres 299.4
2306 Male, age 80, both hemispheres 227.1
2054 Male, age 76, both hemispheres 187.8
Dorsal cochlear nucleus
nTPM: 245.4
2378 Male, age 80, both hemispheres 290.3
2802 Male, age 74, right hemisphere 268.6
2187 Female, age 91, both hemispheres 244.3
2370 Male, age 61, both hemispheres 229.1
2058 Male, age 76, both hemispheres 194.7
Dorsal medullary reticular nucleus
nTPM: 215.9
2373 Male, age 61, both hemispheres 257.8
2088 Male, age 76, both hemispheres 195.0
2040 Female, age 85, both hemispheres 194.9
Dorsal motor vagal complex
nTPM: 229.2
2797 Male, age 61, both hemispheres 355.7
2807 Female, age 85, both hemispheres 290.0
2643 Male, age 74, both hemispheres 229.0
2185 Male, age 76, both hemispheres 208.4
2813 Female, age 72, unknown 200.1
2133 Female, age 91, both hemispheres 187.2
2000 Male, age 74, unknown 186.2
2844 Male, age 55, unknown 176.8
Dorsal tegmental nucleus
nTPM: 213.2
2326 Male, age 74, both hemispheres 246.6
2083 Male, age 80, both hemispheres 217.7
1936 Male, age 76, left hemisphere 195.6
2358 Male, age 61, both hemispheres 192.8
Dorsolateral tegmental area
nTPM: 204.1
2654 Male, age 80, both hemispheres 238.9
2360 Male, age 74, both hemispheres 206.7
2751 Female, age 85, both hemispheres 205.2
2337 Male, age 61, both hemispheres 188.4
2141 Male, age 76, both hemispheres 181.1
Gigantocellular reticular nuclei, medullary
nTPM: 211.7
2314 Male, age 61, both hemispheres 277.3
2387 Female, age 91, both hemispheres 240.6
1876 Female, age 85, both hemispheres 205.4
2310 Male, age 80, both hemispheres 191.8
2022 Male, age 76, right hemisphere 184.8
2462 Male, age 74, both hemispheres 170.0
Gigantocellular reticular nuclei, pars
nTPM: 209.1
2706 Male, age 80, both hemispheres 230.4
2330 Male, age 80, both hemispheres 215.9
2336 Male, age 61, both hemispheres 203.8
2168 Male, age 76, both hemispheres 201.6
2084 Female, age 85, both hemispheres 194.0
Inferior olive
nTPM: 245.6
2379 Male, age 80, both hemispheres 269.0
2178 Male, age 61, both hemispheres 245.7
2085 Female, age 85, both hemispheres 242.8
2628 Female, age 91, both hemispheres 237.4
2563 Male, age 74, both hemispheres 233.1
Kolliker-Fuse nucleus
nTPM: 223.0
2793 Female, age 91, left hemisphere 253.0
2315 Male, age 76, right hemisphere 219.9
2163 Male, age 80, both hemispheres 196.1
Lateral lemniscal nuclei
nTPM: 204.2
2453 Male, age 74, right hemisphere 218.4
2169 Male, age 76, both hemispheres 218.1
2746 Female, age 85, left hemisphere 199.9
2036 Male, age 80, both hemispheres 194.5
2320 Female, age 91, left hemisphere 189.9
Lateral medullary reticular nucleus
nTPM: 229.7
2190 Female, age 85, both hemispheres 259.2
2374 Male, age 61, both hemispheres 240.0
2305 Male, age 74, both hemispheres 235.5
2804 Female, age 91, both hemispheres 234.7
2852 Male, age 80, both hemispheres 207.2
2044 Male, age 76, both hemispheres 201.8
Lateral parabrachial nucleus
nTPM: 214.5
2792 Male, age 76, both hemispheres 285.5
2013 Male, age 80, both hemispheres 212.7
2139 Female, age 85, right hemisphere 201.3
2790 Male, age 61, both hemispheres 158.7
Lateral vestibular nucleus
nTPM: 203.3
2311 Male, age 80, both hemispheres 219.9
2184 Male, age 76, both hemispheres 186.7
Locus coeruleus
nTPM: 176.6
2720 Male, age 74, both hemispheres 207.0
2162 Male, age 80, both hemispheres 197.6
2788 Male, age 74, unknown 186.8
2014 Male, age 55, unknown 170.9
2123 Female, age 91, both hemispheres 165.9
2317 Female, age 72, unknown 159.3
1980 Male, age 76, both hemispheres 148.5
Medial olivary nucleus
nTPM: 267.8
1943 Male, age 61, both hemispheres 312.1
1962 Male, age 76, both hemispheres 265.6
2851 Male, age 80, both hemispheres 255.8
2138 Female, age 91, both hemispheres 237.4
Medial parabrachial nucleus
nTPM: 206.7
2170 Female, age 91, both hemispheres 248.0
2854 Male, age 80, both hemispheres 231.3
2786 Male, age 76, both hemispheres 207.3
2463 Female, age 85, right hemisphere 184.7
2156 Male, age 61, both hemispheres 162.0
Medial periolivary nuclei
nTPM: 209.6
2081 Male, age 80, both hemispheres 229.4
2063 Male, age 76, both hemispheres 222.6
2458 Female, age 91, both hemispheres 217.1
2171 Female, age 85, both hemispheres 192.0
2791 Male, age 74, right hemisphere 187.0
Medial vestibular nucleus
nTPM: 203.4
2803 Female, age 91, both hemispheres 226.7
2624 Male, age 61, both hemispheres 216.8
2801 Male, age 74, both hemispheres 211.5
2093 Male, age 80, both hemispheres 210.0
2743 Female, age 85, both hemispheres 182.6
2134 Male, age 76, both hemispheres 172.9
Motor facial nucleus
nTPM: 213.2
2697 Female, age 85, both hemispheres 238.6
2126 Male, age 61, both hemispheres 216.9
2365 Male, age 74, right hemisphere 212.2
2795 Female, age 91, both hemispheres 211.5
2062 Male, age 76, both hemispheres 208.7
2327 Male, age 80, both hemispheres 191.0
Motor hypoglossal nucleus
nTPM: 198.5
2132 Female, age 85, both hemispheres 242.8
2182 Male, age 80, both hemispheres 213.6
2125 Female, age 91, both hemispheres 193.4
2461 Male, age 61, both hemispheres 182.8
2277 Male, age 76, both hemispheres 160.1
Motor trigeminal nucleus
nTPM: 202.3
2321 Female, age 91, both hemispheres 224.6
2560 Male, age 74, both hemispheres 213.4
2309 Male, age 76, both hemispheres 196.5
2079 Male, age 80, both hemispheres 189.1
2335 Male, age 61, both hemispheres 187.8
Nuclei of the trapezoid body
nTPM: 211.3
1983 Male, age 76, both hemispheres 238.4
2166 Male, age 80, both hemispheres 221.4
2159 Male, age 61, both hemispheres 221.2
2368 Female, age 91, both hemispheres 200.4
2735 Female, age 85, both hemispheres 175.2
Nucleus ambiguus
nTPM: 184.3
2071 Male, age 76, both hemispheres 229.0
2096 Female, age 85, both hemispheres 139.6
Nucleus cuneatus
nTPM: 242.5
2808 Female, age 85, both hemispheres 301.4
2380 Male, age 80, both hemispheres 291.0
2381 Male, age 80, both hemispheres 265.8
2376 Male, age 61, both hemispheres 255.7
2805 Female, age 91, both hemispheres 250.1
2564 Male, age 74, both hemispheres 240.7
2562 Male, age 61, both hemispheres 216.7
2100 Male, age 76, both hemispheres 188.0
2131 Male, age 76, both hemispheres 173.3
Nucleus gracilis
nTPM: 269.6
2382 Male, age 80, both hemispheres 291.2
2299 Female, age 85, both hemispheres 263.0
2627 Male, age 74, both hemispheres 254.6
Nucleus raphe magnus
nTPM: 198.5
2051 Male, age 76, both hemispheres 213.1
2459 Female, age 91, both hemispheres 204.0
2455 Male, age 74, both hemispheres 199.9
2328 Male, age 80, both hemispheres 199.4
2172 Female, age 85, both hemispheres 188.5
2160 Male, age 61, both hemispheres 186.0
Nucleus raphe obscurus
nTPM: 248.8
2800 Male, age 61, midline 258.7
2845 Female, age 85, midline 254.8
2142 Male, age 76, midline 232.9
Nucleus raphe pallidus
nTPM: 249.9
2145 Male, age 76, midline 271.6
1924 Male, age 61, midline 257.1
2183 Male, age 80, midline 220.9
Nucleus tractus solitarii
nTPM: 194.8
2191 Female, age 85, both hemispheres 230.3
2144 Female, age 91, right hemisphere 217.3
2656 Male, age 76, both hemispheres 176.4
2307 Male, age 80, both hemispheres 155.4
Paramedian reticular nucleus
nTPM: 215.1
2052 Male, age 76, both hemispheres 270.1
2313 Male, age 61, both hemispheres 207.0
2057 Male, age 80, both hemispheres 193.8
2050 Female, age 85, both hemispheres 189.4
Parvicellular reticular nuclei
nTPM: 213.0
2095 Male, age 76, both hemispheres 220.5
2558 Male, age 74, both hemispheres 211.5
2119 Male, age 80, both hemispheres 207.0
Parvicellular reticular nuclei, medullary
nTPM: 205.9
2181 Male, age 80, left hemisphere 218.7
2189 Female, age 91, both hemispheres 211.1
2091 Female, age 85, both hemispheres 188.0
Pedunculopontine tegmental nucleus
nTPM: 208.0
2338 Male, age 61, both hemispheres 227.4
2334 Male, age 80, both hemispheres 218.3
1921 Female, age 85, both hemispheres 178.2
Peritrigeminal nucleus
nTPM: 212.7
2136 Male, age 76, both hemispheres 230.7
2179 Male, age 61, both hemispheres 207.0
2067 Female, age 85, both hemispheres 200.3
Pontine nuclei
nTPM: 209.4
2319 Female, age 91, both hemispheres 238.9
2454 Male, age 74, left hemisphere 219.5
2115 Male, age 80, left hemisphere 218.7
1968 Male, age 76, left hemisphere 216.8
1863 Male, age 55, unknown 207.2
2787 Female, age 85, both hemispheres 192.5
2727 Male, age 61, right hemisphere 191.4
2109 Female, age 72, unknown 189.8
Pontine raphe nucleus
nTPM: 180.9
2122 Female, age 85, midline 187.5
2853 Male, age 76, midline 174.3
Posteroventral cochlear nucleus
nTPM: 236.0
2341 Male, age 80, both hemispheres 300.0
2135 Female, age 91, both hemispheres 275.7
2371 Male, age 61, both hemispheres 228.4
2752 Female, age 85, both hemispheres 192.3
2070 Male, age 76, both hemispheres 183.6
Prepositus hypoglossal nucleus
nTPM: 220.0
2855 Female, age 85, right hemisphere 244.8
2086 Male, age 80, both hemispheres 195.2
Principal sensory trigeminal nucleus
nTPM: 195.5
2367 Female, age 91, left hemisphere 234.2
2324 Male, age 76, both hemispheres 194.4
2158 Male, age 61, both hemispheres 179.1
2008 Male, age 80, left hemisphere 174.4
Reticular pontine nucleus, caudal
nTPM: 218.5
2559 Male, age 74, both hemispheres 253.0
2457 Female, age 91, both hemispheres 232.6
2092 Male, age 76, both hemispheres 215.7
2332 Male, age 80, right hemisphere 172.8
Reticular pontine nucleus, oral
nTPM: 225.8
2361 Male, age 74, both hemispheres 281.8
2366 Female, age 91, both hemispheres 257.7
1939 Male, age 80, both hemispheres 212.9
2167 Male, age 76, both hemispheres 195.7
2012 Female, age 85, both hemispheres 180.6
Reticulotegmental nucleus
nTPM: 211.3
2452 Male, age 74, both hemispheres 236.4
2322 Female, age 91, both hemispheres 213.9
2333 Male, age 80, both hemispheres 201.1
2325 Male, age 76, both hemispheres 193.9
Spinal trigeminal nucleus, caudal
nTPM: 204.9
2312 Male, age 61, both hemispheres 232.8
2390 Female, age 91, both hemispheres 212.1
2642 Male, age 74, both hemispheres 206.5
2308 Male, age 80, both hemispheres 199.5
2447 Male, age 76, both hemispheres 173.6
Spinal trigeminal nucleus, interpolar
nTPM: 210.2
2389 Female, age 91, both hemispheres 247.0
2386 Female, age 85, both hemispheres 216.4
2033 Male, age 80, both hemispheres 211.8
2066 Male, age 76, right hemisphere 192.2
2625 Male, age 61, both hemispheres 183.9
Spinal trigeminal nucleus, oral
nTPM: 192.2
2164 Male, age 80, both hemispheres 217.2
1978 Male, age 76, both hemispheres 183.9
2737 Female, age 85, both hemispheres 175.4
Spinal vestibular nucleus
nTPM: 233.5
2384 Male, age 74, both hemispheres 303.9
2806 Female, age 85, both hemispheres 251.0
2796 Male, age 61, both hemispheres 242.2
2186 Female, age 91, both hemispheres 212.4
2780 Male, age 80, both hemispheres 205.3
2748 Male, age 76, both hemispheres 186.4
Subcoeruleus area
nTPM: 207.2
2451 Male, age 74, both hemispheres 238.9
1958 Male, age 80, both hemispheres 213.3
2369 Female, age 85, left hemisphere 211.2
2089 Male, age 76, left hemisphere 198.4
2323 Female, age 91, left hemisphere 174.4
Superior olive
nTPM: 210.4
2020 Male, age 76, both hemispheres 219.3
2561 Female, age 91, both hemispheres 210.5
2329 Male, age 80, right hemisphere 209.0
1875 Female, age 85, both hemispheres 206.7
2364 Male, age 74, right hemisphere 206.5
Superior vestibular nucleus
nTPM: 215.1
2383 Male, age 74, both hemispheres 243.0
2015 Male, age 80, both hemispheres 202.2
2061 Male, age 76, both hemispheres 200.3
Ventral medullary reticular nucleus
nTPM: 224.4
2372 Male, age 61, both hemispheres 259.4
2060 Male, age 76, both hemispheres 189.5
Ventral periolivary nuclei
nTPM: 201.4
2794 Female, age 91, left hemisphere 222.5
2023 Male, age 76, both hemispheres 218.7
2165 Male, age 80, both hemispheres 215.7
2130 Female, age 85, both hemispheres 148.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 226.9
2118 Male, age 80, both hemispheres 251.0
2180 Male, age 61, both hemispheres 231.5
2302 Female, age 91, both hemispheres 228.4
1986 Male, age 76, both hemispheres 215.1
2741 Female, age 85, both hemispheres 208.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 205.3
1959 Male, age 76, both hemispheres 223.1
2840 Female, age 85, both hemispheres 222.2
2161 Male, age 80, both hemispheres 214.6
2456 Female, age 91, both hemispheres 198.1
2449 Male, age 74, both hemispheres 197.6
2359 Male, age 61, both hemispheres 176.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 12.8
FF:10182-103D2 60 years, female 14.3
FF:10165-103B3 76 years, female 11.3
Medulla oblongata
Scaled Tags Per Million: 12.5
FF:10038-101F2 18-64 years, mixed 15.5
FF:10174-103C3 60 years, female 11.4
FF:10155-103A2 76 years, female 10.6
Pons
Scaled Tags Per Million: 18.8
FF:10033-101E6 18-54 years, mixed 18.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 221.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 211.9
Samples: 4

Max nTPM: 221.8
Min nTPM: 198.2
Sample A Female 218.4
Sample B Female 198.2
Sample C Male 221.8
Sample D Male 209.2
Pons
nTPM: 221.1
Samples: 4

Max nTPM: 240.8
Min nTPM: 187.6
Sample A Female 218.4
Sample B Female 187.6
Sample C Male 237.6
Sample D Male 240.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 180.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 180.5
Samples: 4

Max nTPM: 185.3
Min nTPM: 174.9
Sample A Male 185.3
Sample B Male 182.2
Sample C Female 179.5
Sample D Female 174.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 14.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.2
71232800 Antisense, RP_050503_02_A03, Mouse strain C57BL/6J (56 days, male) 14.2
Pons
Expression energy: 13.9
71232800 Antisense, RP_050503_02_A03, Mouse strain C57BL/6J (56 days, male) 13.9

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