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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:158.9 nTPM
HPA Brain:223.2 nTPM
GTEx:158.9 nTPM
FANTOM5:480.4 Scaled Tags Per Million
Pig:135.2 nTPM
Mouse:72.4 nTPM
Allen mouse:1.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036268
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

223.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 126.3
1781 Male, age 74, unknown 154.5
2481 Female, age 94, left hemisphere 153.2
2289 Male, age 61, right hemisphere 146.2
2288 Male, age 75, left hemisphere 130.3
2846 Female, age 79, unknown 112.2
1854 Male, age 80, left hemisphere 106.5
2290 Female, age 72, unknown 104.5
1857 Female, age 85, left hemisphere 103.0
Globus pallidus, externus
nTPM: 223.2
2646 Male, age 61, right hemisphere 297.0
2567 Female, age 72, unknown 225.7
2772 Female, age 79, unknown 221.3
1996 Male, age 80, right hemisphere 188.4
2395 Male, age 75, both hemispheres 183.7
Globus pallidus, internus
nTPM: 215.0
2111 Female, age 85, right hemisphere 260.2
2778 Female, age 91, both hemispheres 251.1
2566 Female, age 72, unknown 219.5
2287 Male, age 75, right hemisphere 214.1
2483 Female, age 94, right hemisphere 198.3
1818 Male, age 74, unknown 184.1
2037 Male, age 80, right hemisphere 177.4
Nucleus accumbens
nTPM: 137.4
2391 Female, age 94, left hemisphere 191.9
2732 Male, age 80, right hemisphere 168.5
2698 Female, age 72, unknown 144.9
1806 Female, age 85, left hemisphere 129.9
2286 Male, age 75, left hemisphere 128.7
1783 Male, age 74, unknown 121.8
2824 Male, age 61, right hemisphere 117.3
1856 Female, age 91, right hemisphere 96.3
Nucleus basalis of Meynert
nTPM: 157.0
2569 Male, age 61, both hemispheres 242.2
2821 Male, age 75, both hemispheres 143.4
2484 Female, age 94, left hemisphere 137.4
2393 Male, age 80, right hemisphere 105.0
Nucleus of the diagonal band
nTPM: 141.8
2775 Male, age 80, right hemisphere 156.3
1812 Female, age 91, both hemispheres 149.2
2195 Female, age 85, both hemispheres 142.8
2029 Male, age 61, right hemisphere 141.4
1979 Male, age 74, unknown 119.1
Putamen
nTPM: 126.6
2647 Male, age 75, left hemisphere 179.1
2482 Female, age 94, left hemisphere 157.8
2489 Female, age 72, unknown 122.8
1829 Male, age 74, unknown 120.8
1937 Female, age 91, right hemisphere 114.2
2466 Female, age 79, unknown 107.5
1838 Male, age 80, right hemisphere 83.7
Septal nuclei
nTPM: 141.6
1960 Male, age 74, unknown 155.3
2394 Male, age 61, left hemisphere 153.4
2059 Female, age 85, both hemispheres 151.3
2031 Female, age 72, unknown 148.3
2629 Female, age 94, right hemisphere 143.7
2009 Female, age 91, both hemispheres 123.8
2199 Male, age 80, right hemisphere 115.5
Stria terminalis, bed nucleus
nTPM: 145.1
1974 Female, age 91, both hemispheres 162.8
2201 Male, age 74, unknown 139.8
2486 Female, age 94, both hemispheres 132.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

158.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 138.1
Samples: 246

Max nTPM: 380.4
Min nTPM: 58.6
Std nTPM: 39.4
Median nTPM: 129.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 380.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 322.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 319.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 252.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 246.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 240.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 236.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 234.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 221.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 220.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 210.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 204.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 202.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 200.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 197.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 196.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 192.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 191.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 189.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 186.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 186.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 184.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 180.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 177.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 177.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 177.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 176.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 175.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 174.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 173.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 173.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 173.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 171.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 171.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 170.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 170.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 170.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 167.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 166.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 166.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 166.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 165.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 164.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 164.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 163.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 162.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 162.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 161.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 161.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 161.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 161.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 160.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 159.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 159.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 159.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 158.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 158.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 157.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 157.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 156.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 155.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 155.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 154.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 153.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 153.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 152.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 152.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 150.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 150.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 150.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 149.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 149.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 149.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 149.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 148.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 148.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 148.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 148.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 147.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 147.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 146.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 146.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 146.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 146.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 146.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 145.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 145.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 145.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 144.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 144.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 143.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 143.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 142.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 142.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 141.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 141.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 140.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 139.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 138.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 136.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 136.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 135.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 135.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 135.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 134.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 134.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 133.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 133.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 133.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 132.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 132.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 132.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 132.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 131.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 131.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 131.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 131.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 131.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 130.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 130.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 129.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 129.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 129.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 128.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 128.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 128.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 128.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 128.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 128.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 127.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 127.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 127.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 126.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 126.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 126.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 126.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 126.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 125.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 125.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 125.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 124.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 124.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 124.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 123.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 123.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 123.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 123.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 122.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 122.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 122.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 122.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 122.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 121.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 121.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 121.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 121.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 120.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 120.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 120.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 120.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 120.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 119.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 119.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 119.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 119.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 119.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 118.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 118.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 118.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 118.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 118.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 118.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 118.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 118.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 117.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 117.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 117.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 117.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 117.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 116.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 115.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 115.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 115.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 115.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 114.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 113.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 113.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 113.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 113.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 112.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 112.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 111.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 111.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 111.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 111.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 111.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 110.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 110.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 109.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 109.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 109.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 109.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 109.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 108.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 108.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 107.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 107.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 107.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 106.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 106.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 105.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 105.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 105.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 105.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 104.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 104.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 103.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 103.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 103.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 102.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 102.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 102.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 102.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 101.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 101.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 99.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 98.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 97.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 97.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 95.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 94.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 92.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 91.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 91.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 89.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 89.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 88.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 87.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 82.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 82.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 82.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 78.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 77.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 71.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 58.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 140.8
Samples: 246

Max nTPM: 551.5
Min nTPM: 71.2
Std nTPM: 49.3
Median nTPM: 130.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 551.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 418.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 364.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 269.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 258.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 234.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 232.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 231.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 227.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 226.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 223.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 220.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 214.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 210.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 206.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 206.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 203.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 201.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 200.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 196.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 192.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 192.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 192.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 191.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 189.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 188.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 185.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 184.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 184.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 184.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 182.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 182.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 181.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 180.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 180.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 178.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 178.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 177.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 176.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 175.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 173.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 172.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 172.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 172.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 171.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 169.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 167.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 166.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 165.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 165.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 164.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 164.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 163.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 163.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 163.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 163.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 161.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 160.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 160.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 159.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 158.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 158.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 156.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 155.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 155.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 154.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 153.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 152.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 152.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 151.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 151.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 150.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 149.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 149.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 148.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 147.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 147.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 146.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 145.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 145.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 143.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 143.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 143.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 143.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 142.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 142.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 142.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 142.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 142.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 142.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 141.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 141.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 141.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 141.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 141.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 140.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 140.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 140.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 139.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 139.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 139.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 137.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 137.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 137.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 136.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 136.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 136.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 136.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 135.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 133.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 133.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 133.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 132.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 132.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 131.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 131.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 131.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 131.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 131.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 131.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 131.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 131.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 130.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 130.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 130.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 129.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 129.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 129.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 128.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 128.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 128.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 128.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 127.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 126.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 126.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 126.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 126.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 126.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 125.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 125.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 124.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 123.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 123.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 122.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 122.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 122.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 122.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 121.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 121.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 121.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 121.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 120.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 120.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 120.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 119.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 119.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 119.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 118.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 118.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 118.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 118.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 118.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 118.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 117.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 117.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 117.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 117.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 116.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 116.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 116.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 115.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 115.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 114.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 114.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 114.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 114.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 114.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 113.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 113.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 113.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 112.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 112.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 112.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 112.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 112.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 112.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 111.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 111.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 111.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 110.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 109.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 109.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 109.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 109.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 107.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 107.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 107.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 106.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 106.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 106.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 105.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 105.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 105.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 104.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 104.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 104.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 104.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 104.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 104.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 103.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 103.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 103.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 103.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 102.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 102.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 102.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 101.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 100.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 100.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 99.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 99.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 99.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 99.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 98.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 97.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 97.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 96.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 96.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 96.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 96.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 95.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 94.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 94.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 94.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 94.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 92.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 91.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 91.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 90.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 88.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 87.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 87.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 86.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 85.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 82.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 71.2
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Brain - Putamen (basal ganglia)
Average nTPM: 158.9
Samples: 205

Max nTPM: 347.3
Min nTPM: 69.4
Std nTPM: 41.9
Median nTPM: 152.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 347.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 319.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 295.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 281.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 278.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 270.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 266.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 261.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 253.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 242.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 241.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 236.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 234.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 229.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 225.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 224.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 221.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 219.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 219.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 210.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 209.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 207.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 205.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 204.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 204.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 202.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 201.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 201.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 199.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 198.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 197.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 196.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 193.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 191.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 188.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 187.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 187.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 184.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 184.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 183.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 179.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 179.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 178.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 178.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 177.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 177.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 177.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 177.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 176.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 176.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 175.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 174.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 174.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 174.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 173.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 172.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 171.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 171.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 170.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 170.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 170.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 170.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 170.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 169.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 168.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 167.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 166.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 166.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 166.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 166.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 165.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 165.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 165.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 165.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 164.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 164.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 163.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 163.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 162.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 162.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 162.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 162.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 162.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 161.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 160.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 158.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 157.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 156.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 156.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 156.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 155.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 155.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 155.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 154.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 154.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 153.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 153.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 153.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 153.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 153.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 153.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 153.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 152.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 152.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 152.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 152.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 151.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 150.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 149.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 148.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 148.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 147.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 147.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 147.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 147.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 147.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 146.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 146.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 145.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 144.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 144.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 144.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 143.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 143.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 143.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 143.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 142.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 142.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 141.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 141.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 141.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 141.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 139.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 139.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 139.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 139.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 137.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 137.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 137.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 137.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 137.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 135.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 135.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 135.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 134.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 133.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 133.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 133.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 133.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 132.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 132.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 131.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 131.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 130.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 130.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 130.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 129.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 129.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 129.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 128.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 127.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 126.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 126.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 124.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 124.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 124.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 123.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 123.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 123.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 123.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 123.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 123.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 122.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 122.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 122.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 121.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 121.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 120.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 120.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 119.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 119.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 118.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 118.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 117.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 117.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 116.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 115.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 114.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 113.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 112.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 112.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 111.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 111.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 110.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 110.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 109.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 109.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 107.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 99.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 98.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 96.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 96.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 93.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 80.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 69.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

480.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 198.8
FF:10164-103B2 76 years, female 198.8
Nucleus accumbens
Scaled Tags Per Million: 186.6
FF:10037-101F1 23-56 years, mixed 186.6
Putamen
Scaled Tags Per Million: 180.0
FF:10176-103C5 60 years, female 180.0
Globus pallidus
Scaled Tags Per Million: 480.4
FF:10175-103C4 60 years, female 566.6
FF:10161-103A8 76 years, female 394.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.2
Pig sample Sample description nTPM
Caudate
nTPM: 90.9
Samples: 4

Max nTPM: 99.2
Min nTPM: 83.7
Sample A Female 85.2
Sample B Female 95.5
Sample C Male 99.2
Sample D Male 83.7
Putamen
nTPM: 135.2
Samples: 4

Max nTPM: 177.5
Min nTPM: 95.3
Sample A Female 177.5
Sample B Female 95.3
Sample C Male 119.6
Sample D Male 148.2
Septum
nTPM: 105.4
Samples: 4

Max nTPM: 122.2
Min nTPM: 92.9
Sample A Female 122.2
Sample B Female 92.9
Sample C Male 109.4
Sample D Male 97.0
Ventral pallidum
nTPM: 127.0
Samples: 4

Max nTPM: 160.2
Min nTPM: 86.5
Sample A Female 86.5
Sample B Female 107.1
Sample C Male 160.2
Sample D Male 154.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 72.4
Samples: 4

Max nTPM: 75.6
Min nTPM: 66.7
Sample A Male 75.6
Sample B Male 74.7
Sample C Female 72.6
Sample D Female 66.7
Septum
nTPM: 71.1
Samples: 4

Max nTPM: 77.4
Min nTPM: 62.7
Sample A Male 70.8
Sample B Male 62.7
Sample C Female 73.4
Sample D Female 77.4
Ventral forebrain
nTPM: 59.7
Samples: 4

Max nTPM: 63.5
Min nTPM: 54.9
Sample A Male 63.5
Sample B Male 62.0
Sample C Female 58.2
Sample D Female 54.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.8
564753 Antisense, RP_040826_01_C09, Mouse strain C57BL/6J (56 days, male) 0.8
Pallidum
Expression energy: 1.6
564753 Antisense, RP_040826_01_C09, Mouse strain C57BL/6J (56 days, male) 1.6

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