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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:89.5 nTPM
HPA Brain:367.6 nTPM
GTEx:89.5 nTPM
FANTOM5:445.5 Scaled Tags Per Million
Pig:189.0 nTPM
Mouse:418.3 nTPM
Allen mouse:10.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA023700
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

367.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 114.9
2288 Male, age 75, left hemisphere 221.2
2481 Female, age 94, left hemisphere 136.5
2846 Female, age 79, unknown 122.8
1854 Male, age 80, left hemisphere 110.4
1781 Male, age 74, unknown 99.6
2290 Female, age 72, unknown 90.4
2289 Male, age 61, right hemisphere 76.1
1857 Female, age 85, left hemisphere 62.4
Globus pallidus, externus
nTPM: 286.1
1996 Male, age 80, right hemisphere 444.9
2772 Female, age 79, unknown 318.8
2395 Male, age 75, both hemispheres 260.0
2646 Male, age 61, right hemisphere 210.6
2567 Female, age 72, unknown 196.3
Globus pallidus, internus
nTPM: 367.6
2111 Female, age 85, right hemisphere 564.8
2778 Female, age 91, both hemispheres 480.0
2287 Male, age 75, right hemisphere 379.1
2037 Male, age 80, right hemisphere 365.6
1818 Male, age 74, unknown 357.3
2566 Female, age 72, unknown 261.1
2483 Female, age 94, right hemisphere 165.5
Nucleus accumbens
nTPM: 177.6
2391 Female, age 94, left hemisphere 432.0
2286 Male, age 75, left hemisphere 203.0
2698 Female, age 72, unknown 193.3
2732 Male, age 80, right hemisphere 181.1
1806 Female, age 85, left hemisphere 121.1
1783 Male, age 74, unknown 116.3
2824 Male, age 61, right hemisphere 109.4
1856 Female, age 91, right hemisphere 64.4
Nucleus basalis of Meynert
nTPM: 148.4
2821 Male, age 75, both hemispheres 187.8
2569 Male, age 61, both hemispheres 152.6
2393 Male, age 80, right hemisphere 131.5
2484 Female, age 94, left hemisphere 121.7
Nucleus of the diagonal band
nTPM: 46.6
1812 Female, age 91, both hemispheres 81.3
1979 Male, age 74, unknown 51.8
2029 Male, age 61, right hemisphere 46.2
2195 Female, age 85, both hemispheres 29.5
2775 Male, age 80, right hemisphere 24.1
Putamen
nTPM: 134.9
2482 Female, age 94, left hemisphere 230.5
1829 Male, age 74, unknown 187.3
1937 Female, age 91, right hemisphere 138.8
2489 Female, age 72, unknown 117.7
2647 Male, age 75, left hemisphere 113.8
2466 Female, age 79, unknown 106.5
1838 Male, age 80, right hemisphere 49.4
Septal nuclei
nTPM: 90.3
2394 Male, age 61, left hemisphere 222.3
2199 Male, age 80, right hemisphere 106.2
2629 Female, age 94, right hemisphere 99.5
2059 Female, age 85, both hemispheres 67.2
2009 Female, age 91, both hemispheres 56.9
2031 Female, age 72, unknown 49.7
1960 Male, age 74, unknown 30.1
Stria terminalis, bed nucleus
nTPM: 72.3
1974 Female, age 91, both hemispheres 80.7
2201 Male, age 74, unknown 77.6
2486 Female, age 94, both hemispheres 58.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 62.9
Samples: 246

Max nTPM: 184.3
Min nTPM: 13.1
Std nTPM: 33.6
Median nTPM: 53.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 184.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 181.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 163.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 161.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 159.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 152.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 142.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 142.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 138.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 133.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 127.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 124.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 123.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 123.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 120.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 118.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 118.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 115.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 114.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 113.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 112.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 112.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 111.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 111.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 109.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 109.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 108.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 106.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 104.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 103.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 102.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 102.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 102.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 102.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 102.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 101.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 101.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 99.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 99.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 99.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 97.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 96.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 96.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 96.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 95.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 94.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 94.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 93.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 92.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 91.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 90.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 89.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 89.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 89.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 88.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 88.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 87.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 87.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 86.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 86.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 85.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 84.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 83.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 83.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 82.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 82.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 82.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 81.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 80.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 80.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 80.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 80.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 78.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 76.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 76.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 76.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 75.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 75.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 75.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 74.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 74.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 72.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 70.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 70.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 70.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 69.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 69.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 69.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 69.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 68.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 67.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 66.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 65.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 64.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 64.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 63.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 63.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 63.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 63.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 63.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 62.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 62.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 62.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 61.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 61.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 60.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 60.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 60.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 60.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 60.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 59.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 59.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 59.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 57.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 57.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 56.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 55.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 55.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 54.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 54.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 54.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 54.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 53.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 53.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 53.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 52.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 52.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 52.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 52.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 51.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 50.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 49.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 49.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 48.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 48.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 48.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 47.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 47.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 46.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 45.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 45.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 45.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 44.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 44.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 44.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 44.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 43.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 43.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 43.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 43.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 42.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 42.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 41.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 41.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 41.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 41.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 41.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 40.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 40.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 40.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 40.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 40.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 40.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 39.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 39.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 39.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 38.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 38.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 38.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 38.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 38.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 37.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 37.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 37.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 37.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 37.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 36.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 36.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 36.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 36.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 36.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 36.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 36.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 35.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 35.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 35.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 35.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 35.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 35.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 34.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 34.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 34.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 34.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 34.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 34.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 33.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 33.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 33.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 33.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 33.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 32.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 32.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 32.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 31.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 31.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 31.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 30.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 30.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 29.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 29.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 29.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 29.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 29.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 29.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 28.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 28.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 28.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 27.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 27.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 27.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 26.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 26.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 26.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 25.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 25.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 24.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 24.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 24.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 23.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 23.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 23.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 21.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 20.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 19.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 19.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 19.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 19.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 16.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 13.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 42.3
Samples: 246

Max nTPM: 473.2
Min nTPM: 9.0
Std nTPM: 42.7
Median nTPM: 32.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 473.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 270.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 257.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 205.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 159.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 145.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 142.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 138.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 99.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 95.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 94.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 92.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 89.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 89.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 85.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 84.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 83.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 83.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 82.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 80.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 77.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 74.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 73.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 70.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 70.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 70.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 67.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 65.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 65.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 65.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 65.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 65.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 63.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 63.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 63.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 62.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 61.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 61.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 60.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 58.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 58.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 57.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 57.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 55.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 54.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 53.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 51.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 51.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 51.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 50.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 50.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 50.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 50.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 48.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 48.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 47.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 47.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 47.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 47.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 46.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 46.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 45.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 45.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 45.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 45.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 45.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 45.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 44.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 44.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 44.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 44.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 42.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 42.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 41.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 41.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 41.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 41.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 41.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 41.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 40.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 40.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 40.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 40.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 40.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 39.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 39.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 39.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 39.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 39.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 39.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 38.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 37.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 37.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 37.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 37.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 36.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 36.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 36.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 36.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 36.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 36.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 35.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 35.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 35.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 35.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 35.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 35.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 35.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 35.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 34.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 34.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 34.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 34.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 34.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 33.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 33.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 33.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 33.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 33.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 33.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 33.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 32.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 32.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 32.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 32.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 31.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 31.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 31.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 31.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 31.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 31.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 30.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 30.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 30.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 30.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 30.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 30.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 30.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 30.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 30.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 30.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 29.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 29.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 29.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 29.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 29.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 28.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 28.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 28.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 28.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 28.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 28.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 28.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 28.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 28.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 28.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 28.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 27.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 27.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 27.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 26.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 26.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 26.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 26.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 26.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 26.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 26.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 26.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 25.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 25.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 25.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 25.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 25.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 25.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 24.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 24.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 24.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 24.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 24.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 24.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 23.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 23.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 23.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 23.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 23.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 22.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 22.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 22.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 22.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 22.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 21.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 21.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 21.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 21.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 21.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 20.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 20.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 20.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 20.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 20.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 20.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 20.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 20.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 19.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 19.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 19.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 19.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 18.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 18.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 18.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 18.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 17.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 17.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 17.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 17.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 16.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 16.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 16.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 16.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 16.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 16.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 16.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 16.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 15.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 15.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 15.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 14.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 14.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 14.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 14.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 14.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 14.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 14.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 13.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 13.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 13.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 13.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 13.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 13.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 13.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 13.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 12.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 11.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 11.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 9.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 9.0
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Brain - Putamen (basal ganglia)
Average nTPM: 89.5
Samples: 205

Max nTPM: 377.5
Min nTPM: 15.4
Std nTPM: 45.8
Median nTPM: 83.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 377.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 218.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 214.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 198.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 195.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 184.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 176.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 170.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 170.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 168.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 162.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 161.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 161.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 161.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 160.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 156.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 155.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 151.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 151.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 151.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 150.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 149.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 148.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 142.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 141.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 140.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 138.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 137.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 134.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 132.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 132.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 131.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 130.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 129.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 129.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 129.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 127.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 126.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 124.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 122.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 122.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 119.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 119.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 118.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 118.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 117.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 117.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 117.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 117.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 116.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 116.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 115.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 114.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 113.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 113.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 112.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 112.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 110.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 109.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 108.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 107.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 106.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 105.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 104.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 103.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 102.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 102.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 101.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 101.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 100.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 100.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 99.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 99.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 99.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 99.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 98.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 97.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 96.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 95.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 95.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 95.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 94.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 93.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 93.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 93.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 93.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 92.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 91.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 91.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 90.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 90.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 90.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 90.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 89.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 89.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 89.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 87.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 85.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 85.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 84.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 84.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 84.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 83.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 83.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 82.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 81.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 81.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 80.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 78.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 78.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 77.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 77.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 76.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 76.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 74.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 74.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 73.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 72.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 72.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 71.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 70.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 70.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 70.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 70.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 69.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 69.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 69.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 69.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 68.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 68.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 68.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 67.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 66.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 66.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 65.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 65.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 64.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 64.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 62.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 62.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 62.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 62.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 61.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 60.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 60.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 60.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 59.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 59.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 59.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 59.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 59.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 58.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 58.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 57.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 57.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 56.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 56.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 55.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 55.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 54.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 54.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 54.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 53.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 53.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 52.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 52.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 52.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 52.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 51.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 50.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 49.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 48.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 47.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 43.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 41.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 40.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 39.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 39.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 38.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 37.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 37.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 37.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 37.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 37.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 36.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 36.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 35.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 35.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 35.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 33.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 32.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 31.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 30.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 30.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 28.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 28.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 28.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 24.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 24.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 18.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 17.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 15.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

445.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 83.6
FF:10164-103B2 76 years, female 83.6
Nucleus accumbens
Scaled Tags Per Million: 248.9
FF:10037-101F1 23-56 years, mixed 248.9
Putamen
Scaled Tags Per Million: 92.2
FF:10176-103C5 60 years, female 92.2
Globus pallidus
Scaled Tags Per Million: 445.5
FF:10175-103C4 60 years, female 497.5
FF:10161-103A8 76 years, female 393.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.0
Pig sample Sample description nTPM
Caudate
nTPM: 66.6
Samples: 4

Max nTPM: 98.7
Min nTPM: 51.8
Sample A Female 98.7
Sample B Female 51.8
Sample C Male 58.6
Sample D Male 57.2
Putamen
nTPM: 189.0
Samples: 4

Max nTPM: 339.0
Min nTPM: 95.6
Sample A Female 339.0
Sample B Female 95.6
Sample C Male 128.2
Sample D Male 193.3
Septum
nTPM: 115.4
Samples: 4

Max nTPM: 139.8
Min nTPM: 81.1
Sample A Female 125.5
Sample B Female 81.1
Sample C Male 115.0
Sample D Male 139.8
Ventral pallidum
nTPM: 166.9
Samples: 4

Max nTPM: 241.2
Min nTPM: 74.5
Sample A Female 74.5
Sample B Female 132.9
Sample C Male 219.0
Sample D Male 241.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

418.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 348.5
Samples: 4

Max nTPM: 807.8
Min nTPM: 186.0
Sample A Male 807.8
Sample B Male 188.5
Sample C Female 211.5
Sample D Female 186.0
Septum
nTPM: 418.3
Samples: 4

Max nTPM: 967.1
Min nTPM: 202.8
Sample A Male 262.6
Sample B Male 202.8
Sample C Female 967.1
Sample D Female 240.7
Ventral forebrain
nTPM: 117.8
Samples: 4

Max nTPM: 124.9
Min nTPM: 112.4
Sample A Male 112.4
Sample B Male 114.9
Sample C Female 119.1
Sample D Female 124.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.3
70613967 Antisense, RP_050725_01_C07, Mouse strain C57BL/6J (56 days, male) 8.6
77413700 Antisense, RP_070205_01_E04, Mouse strain C57BL/6J (56 days, male) 8.6
532631 Antisense, RP_040810_02_G06, Mouse strain C57BL/6J (56 days, male) 7.8
Pallidum
Expression energy: 10.8
70613967 Antisense, RP_050725_01_C07, Mouse strain C57BL/6J (56 days, male) 12.1
77413700 Antisense, RP_070205_01_E04, Mouse strain C57BL/6J (56 days, male) 11.5
532631 Antisense, RP_040810_02_G06, Mouse strain C57BL/6J (56 days, male) 8.7

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