Expression of RPS6 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

RPS6 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 962.5

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

1457.9

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	8937.3
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	5886.1
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	4523.4
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	4366.9
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	4203.4
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	4202.5
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	3950.4
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	3878.4
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	3774.9
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	3771.2
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	3743.1
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	3705.6
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	3696.6
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	3607.1
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	3533.0
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	3502.5
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	3464.6
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	3357.2
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	3302.2
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	3197.8
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	3143.9
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	3103.2
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	3102.7
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	2916.8
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	2847.0
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	2764.6
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	2761.0
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	2758.2
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	2749.1
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	2694.8
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	2681.5
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	2631.6
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	2621.0
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	2589.9
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	2564.1
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	2515.9
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	2509.1
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	2486.8
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	2485.1
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	2474.9
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	2466.7
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	2419.7
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	2413.2
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	2409.1
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	2403.0
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	2327.2
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	2323.1
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	2298.0
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	2285.9
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	2273.1
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	2269.5
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	2268.0
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	2262.9
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	2250.6
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	2167.9
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	2159.7
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	2157.6
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	2155.3
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	2130.6
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	2121.7
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	2115.4
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	2115.4
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	2099.4
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	2099.1
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	2076.0
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	2050.8
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	2050.3
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	2048.7
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	2003.9
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	1978.2
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	1957.0
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	1945.5
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	1934.9
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	1926.1
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	1919.8
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	1916.0
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	1908.7
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	1895.1
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	1874.5
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	1868.0
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	1837.8
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	1826.2
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	1816.9
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	1803.2
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	1786.1
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	1775.8
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	1772.0
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	1759.3
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	1757.5
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	1715.7
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	1710.2
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	1681.9
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	1679.7
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	1676.4
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	1671.3
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	1671.1
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	1669.1
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	1661.3
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	1659.2
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	1654.0
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	1640.3
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	1628.9
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	1617.7
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	1610.8
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	1606.7
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	1597.8
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	1589.9
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	1585.1
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	1566.0
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	1565.6
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	1555.3
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	1547.4
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	1546.2
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	1542.9
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	1542.1
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	1520.0
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	1511.7
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	1509.2
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	1508.9
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	1498.2
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	1478.7
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	1478.4
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	1478.0
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	1477.9
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	1477.0
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	1472.8
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	1469.2
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	1466.6
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	1465.4
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	1465.0
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	1447.8
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	1441.3
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	1430.7
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	1430.7
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	1425.5
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	1421.3
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	1421.1
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	1414.4
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	1413.8
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	1406.8
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	1403.5
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	1400.9
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	1400.1
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	1397.1
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	1388.3
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	1387.7
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	1384.0
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	1383.4
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	1366.2
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	1357.3
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	1355.9
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	1351.8
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	1347.4
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	1347.1
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	1336.6
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	1333.8
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	1332.3
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	1327.5
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	1326.5
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	1324.9
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	1316.1
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	1308.4
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	1303.3
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	1300.9
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	1295.0
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	1293.0
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	1292.2
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	1285.1
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	1281.8
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	1276.9
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	1276.6
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	1271.7
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	1269.7
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	1265.3
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	1253.1
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	1238.0
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	1236.4
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	1235.9
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	1230.6
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	1228.2
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	1225.6
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	1218.5
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	1217.5
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	1211.2
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	1210.3
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	1205.7
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	1203.5
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	1202.5
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	1201.3
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	1199.6
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	1191.6
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	1187.0
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	1186.2
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	1182.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	1181.0
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	1181.0
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	1178.0
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	1166.2
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	1165.4
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	1161.2
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	1157.6
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	1155.9
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	1152.4
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	1151.6
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	1144.3
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	1139.2
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	1125.1
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	1124.8
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	1122.1
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	1114.8
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	1111.6
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	1106.8
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	1099.7
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	1097.0
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	1095.8
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	1093.5
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	1093.4
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	1082.7
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	1072.8
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	1071.8
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	1065.1
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	1061.0
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	1059.8
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	1056.1
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	1038.3
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	1038.3
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	1035.6
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	1030.4
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	1022.0
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	1022.0
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	1016.9
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	1016.8
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	1013.7
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	1011.8
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	1011.1
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	1007.1
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	1004.1
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	996.2
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	993.7
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	993.3
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	992.2
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	984.6
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	973.4
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	969.7
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	966.0
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	963.2
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	961.8
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	957.8
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	947.0
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	943.2
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	939.6
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	937.9
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	936.4
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	930.0
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	929.6
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	925.6
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	921.6
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	921.4
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	919.7
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	917.8
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	902.9
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	898.2
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	890.1
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	885.5
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	879.2
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	878.2
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	877.3
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	872.7
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	869.2
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	868.8
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	864.9
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	863.8
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	861.1
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	861.1
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	852.8
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	847.3
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	844.3
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	831.5
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	830.8
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	828.2
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	827.2
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	823.5
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	810.8
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	806.3
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	801.2
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	799.6
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	791.3
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	790.5
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	788.1
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	786.0
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	783.7
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	780.3
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	779.5
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	776.0
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	775.3
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	773.9
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	770.8
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	770.6
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	765.4
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	764.8
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	757.6
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	749.4
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	744.1
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	734.9
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	733.1
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	732.4
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	731.8
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	727.4
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	726.4
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	723.9
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	719.7
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	718.0
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	717.8
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	713.0
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	709.2
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	708.4
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	707.2
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	689.4
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	680.9
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	680.6
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	680.1
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	676.5
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	669.7
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	665.5
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	663.0
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	662.4
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	657.0
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	653.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	650.1
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	647.7
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	643.9
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	637.0
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	631.8
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	626.8
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	626.8
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	626.3
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	619.1
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	617.3
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	613.7
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	610.7
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	599.2
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	598.8
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	591.1
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	584.7
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	581.9
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	580.3
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	575.4
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	572.5
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	563.7
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	551.9
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	543.9
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	542.2
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	542.0
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	529.8
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	518.3
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	508.9
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	507.2
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	505.9
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	497.4
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	487.3
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	479.7
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	427.5
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

RPS6 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 2078.08

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

2155.6

Number of samples

231

Samples

Sample	Description	pTPM
DO45283	60 years, male, NA, stage:3, alive, 510 days	9160.0
DO45259	65 years, male, NA, stage:3, alive, 330 days	8751.0
DO45303	62 years, female, NA, stage:3, alive, 990 days	7521.2
DO45189	85 years, female, NA, stage:2, alive, 1200 days	6111.7
DO45251	57 years, female, NA, stage:2, alive, 900 days	5905.2
DO23519	65 years, male, NA, stage:3, alive, 630 days	5841.3
DO45279	67 years, male, NA, stage:3, alive, 1290 days	5503.0
DO48737	52 years, male, NA, stage:1, alive, 720 days	5383.9
DO48682	72 years, female, NA, stage:3, dead, 120 days	5319.7
DO50815	62 years, male, NA, stage:3, alive, 150 days	4831.8
DO45209	70 years, male, NA, stage:4, alive, 1350 days	4790.0
DO45221	75 years, female, NA, stage:4, dead, 390 days	4745.0
DO45307	54 years, female, NA, stage:4, dead, 240 days	4422.3
DO23525	71 years, male, NA, stage:4, alive, 1050 days	4248.4
DO23530	53 years, male, NA, stage:4, dead, 180 days	4130.2
DO50855	47 years, male, NA, stage:2, alive, 570 days	4078.3
DO45145	78 years, male, NA, stage:3, dead, 60 days	4056.9
DO45287	74 years, male, NA, stage:1, alive, 390 days	4032.7
DO23515	71 years, male, NA, stage:2, alive, 1230 days	4013.1
DO45247	31 years, female, NA, stage:2, alive, 210 days	3991.6
DO45193	68 years, female, NA, stage:4, dead, 120 days	3895.8
DO48730	73 years, female, NA, stage:2, alive, 630 days	3820.0
DO45285	59 years, male, NA, stage:3, alive, 480 days	3720.4
DO23545	67 years, male, NA, stage:2, dead, 570 days	3512.0
DO48757	68 years, female, NA, stage:3, alive, 480 days	3432.6
DO45093	71 years, male, NA, stage:2, dead, 720 days	3382.1
DO45097	69 years, male, NA, stage:3, alive, 1620 days	3363.4
DO48715	58 years, female, NA, stage:2, dead, 690 days	3355.2
DO50814	83 years, male, NA, stage:3, alive, 420 days	3347.9
DO45173	63 years, male, NA, stage:3, alive, 1170 days	3323.6
DO45299	70 years, female, NA, stage:1, alive, 1440 days	3314.9
DO48747	62 years, male, NA, stage:3, alive, 540 days	3299.7
DO45127	73 years, male, NA, stage:3, dead, 420 days	3283.3
DO23516	69 years, male, NA, stage:3, dead, 20 days	3247.0
DO50859	77 years, male, NA, stage:2, alive, 180 days	3244.2
DO23521	63 years, male, NA, stage:3, alive, 1110 days	3189.6
DO50799	66 years, female, NA, stage:2, alive, 540 days	3175.8
DO23528	45 years, female, NA, stage:2, alive, 1020 days	3102.5
DO45187	32 years, female, NA, stage:1, alive, 1260 days	3092.9
DO45281	83 years, male, NA, stage:4, alive, 750 days	3088.0
DO45191	61 years, female, NA, stage:2, alive, 1200 days	3086.0
DO45231	84 years, male, NA, stage:2, alive, 930 days	3057.3
DO45289	78 years, female, NA, stage:3, alive, 360 days	3027.9
DO45249	57 years, male, NA, stage:1, alive, 630 days	3021.4
DO50844	75 years, male, NA, stage:4, alive, 300 days	3004.1
DO45183	72 years, female, NA, stage:2, dead, 570 days	2989.2
DO48751	68 years, male, NA, stage:2, dead, 480 days	2936.0
DO45213	58 years, male, NA, stage:1, alive, 1200 days	2910.1
DO45261	74 years, male, NA, stage:3, alive, 990 days	2869.7
DO45237	58 years, male, NA, stage:2, alive, 900 days	2842.6
DO48736	76 years, female, NA, stage:1, alive, 600 days	2819.1
DO45305	66 years, male, NA, stage:4, alive, 300 days	2815.9
DO23508	79 years, female, NA, stage:2, alive, 390 days	2811.6
DO50793	76 years, male, NA, stage:4, alive, 540 days	2787.5
DO50785	37 years, male, NA, stage:4, dead, 90 days	2775.8
DO23542	66 years, male, NA, stage:3, alive, 960 days	2770.8
DO48723	73 years, male, NA, stage:1, alive, 600 days	2768.7
DO45165	75 years, male, NA, stage:2, alive, 690 days	2734.3
DO45103	47 years, male, NA, stage:3, alive, 450 days	2708.5
DO45275	65 years, male, NA, stage:3, dead, 10 days	2636.4
DO45205	67 years, female, NA, stage:2, dead, 90 days	2615.9
DO45141	73 years, male, NA, stage:2, alive, 1320 days	2607.2
DO45175	74 years, male, NA, stage:2, alive, 1140 days	2569.9
DO23533	61 years, male, NA, stage:2, alive, 900 days	2541.6
DO45157	62 years, male, NA, stage:2, alive, 1980 days	2534.1
DO23523	52 years, male, NA, stage:3, alive, 1080 days	2533.1
DO50791	79 years, female, NA, stage:1, dead, 480 days	2481.5
DO45203	71 years, female, NA, stage:2, alive, 1170 days	2477.2
DO45273	62 years, male, NA, stage:2, alive, 480 days	2440.3
DO48672	81 years, male, NA, stage:2, alive, 450 days	2437.3
DO45185	89 years, male, NA, stage:2, alive, 600 days	2414.3
DO50802	49 years, male, NA, stage:2, alive, 930 days	2393.1
DO45253	50 years, male, NA, stage:2, alive, 870 days	2376.5
DO45239	42 years, male, NA, stage:2, alive, 870 days	2349.6
DO45243	74 years, female, NA, stage:3, alive, 930 days	2325.3
DO23547	74 years, male, NA, stage:1, alive, 1020 days	2320.2
DO45277	64 years, male, NA, stage:3, alive, 600 days	2270.5
DO45095	66 years, male, NA, stage:2, alive, 1620 days	2269.4
DO50809	56 years, male, NA, stage:3, dead, 720 days	2267.7
DO45267	73 years, male, NA, stage:3, dead, 570 days	2243.2
DO50857	72 years, male, NA, stage:2, alive, 210 days	2242.7
DO50778	60 years, male, NA, stage:4, alive, 630 days	2241.8
DO45297	61 years, female, NA, stage:4, dead, 1260 days	2223.2
DO50822	66 years, male, NA, stage:2, alive, 510 days	2221.7
DO45135	77 years, male, NA, stage:1, alive, 1410 days	2193.3
DO45217	69 years, female, NA, stage:3, dead, 270 days	2189.4
DO48697	64 years, female, NA, stage:2, dead, 810 days	2185.1
DO45131	53 years, male, NA, stage:4, dead, 360 days	2158.0
DO45219	78 years, male, NA, stage:2, alive, 1080 days	2155.8
DO50811	62 years, male, NA, stage:1, alive, 450 days	2150.7
DO45163	76 years, male, NA, stage:2, alive, 960 days	2142.0
DO50820	77 years, female, NA, stage:3, alive, 510 days	2137.5
DO48732	73 years, male, NA, stage:3, alive, 630 days	2131.6
DO45269	59 years, male, NA, stage:3, alive, 750 days	2124.0
DO50798	77 years, male, NA, stage:3, dead, 30 days	2121.9
DO45241	49 years, male, NA, stage:1, alive, 1080 days	2088.6
DO45139	63 years, male, NA, stage:3, alive, 1320 days	2084.1
DO45161	74 years, male, NA, stage:2, dead, 540 days	2078.1
DO50806	70 years, male, NA, stage:4, alive, 540 days	2044.6
DO45113	58 years, male, NA, stage:3, alive, 1560 days	2027.0
DO23549	74 years, male, NA, stage:3, alive, 990 days	2024.0
DO23546	63 years, male, NA, stage:2, alive, 1050 days	1995.9
DO23543	63 years, male, NA, stage:2, alive, 1020 days	1966.9
DO50800	74 years, male, NA, stage:2, alive, 510 days	1955.9
DO45121	61 years, male, NA, stage:3, alive, 1530 days	1950.8
DO48677	58 years, male, NA, stage:3, alive, 1140 days	1938.7
DO48720	62 years, female, NA, stage:2, alive, 570 days	1929.8
DO48728	74 years, female, NA, stage:2, alive, 150 days	1907.0
DO45225	69 years, male, NA, stage:1, alive, 1050 days	1884.6
DO45179	78 years, female, NA, stage:2, alive, 600 days	1875.2
DO45257	46 years, male, NA, stage:3, alive, 810 days	1868.9
DO48727	81 years, female, NA, stage:2, dead, 390 days	1858.6
DO45199	86 years, female, NA, stage:2, alive, 1350 days	1837.9
DO23536	56 years, male, NA, stage:2, alive, 930 days	1836.3
DO48725	66 years, male, NA, stage:1, alive, 780 days	1829.7
DO45177	81 years, female, NA, stage:3, alive, 1260 days	1810.0
DO50829	78 years, male, NA, stage:3, alive, 570 days	1791.3
DO45143	69 years, male, NA, stage:3, alive, 1290 days	1775.6
DO23514	64 years, male, NA, stage:2, alive, 1290 days	1766.8
DO50805	72 years, male, NA, stage:2, alive, 690 days	1765.5
DO45263	67 years, male, NA, stage:3, dead, 270 days	1760.4
DO23526	66 years, male, NA, stage:3, alive, 1050 days	1757.8
DO48733	72 years, male, NA, stage:2, alive, 600 days	1739.3
DO45117	73 years, female, NA, stage:2, dead, 1110 days	1735.0
DO45265	73 years, male, NA, stage:3, alive, 1020 days	1710.8
DO45153	77 years, female, NA, stage:2, alive, 1380 days	1708.6
DO45171	56 years, male, NA, stage:3, alive, 600 days	1703.5
DO23548	78 years, female, NA, stage:1, alive, 840 days	1702.9
DO48759	73 years, male, NA, stage:3, alive, 720 days	1699.2
DO45149	70 years, female, NA, stage:2, alive, 1260 days	1698.6
DO45201	49 years, male, NA, stage:1, alive, 900 days	1695.1
DO23524	71 years, female, NA, stage:2, alive, 1050 days	1672.7
DO45255	81 years, male, NA, stage:3, alive, 720 days	1651.2
DO45211	76 years, male, NA, stage:3, alive, 240 days	1621.2
DO45301	56 years, male, NA, stage:2, dead, 1440 days	1615.9
DO23513	76 years, male, NA, stage:3, alive, 1200 days	1590.3
DO23537	79 years, male, NA, stage:2, dead, 900 days	1587.3
DO45181	84 years, female, NA, stage:2, alive, 1200 days	1583.4
DO48717	54 years, male, NA, stage:4, dead, 180 days	1575.0
DO48719	80 years, male, NA, stage:2, alive, 690 days	1563.4
DO23511	83 years, female, NA, stage:3, dead, 180 days	1562.6
DO45235	68 years, female, NA, stage:1, alive, 900 days	1558.7
DO48746	76 years, male, NA, stage:3, alive, 570 days	1546.6
DO45123	78 years, female, NA, stage:2, dead, 570 days	1540.7
DO23529	72 years, male, NA, stage:4, alive, 930 days	1529.3
DO45233	83 years, male, NA, stage:3, alive, 900 days	1526.7
DO45169	74 years, male, NA, stage:3, alive, 1350 days	1519.7
DO50804	81 years, male, NA, stage:2, alive, 720 days	1518.6
DO45223	67 years, male, NA, stage:4, alive, 1020 days	1510.0
DO50813	56 years, male, NA, stage:2, alive, 420 days	1492.6
DO45229	74 years, male, NA, stage:1, alive, 990 days	1492.1
DO23539	77 years, male, NA, stage:1, alive, 1110 days	1466.5
DO50816	63 years, male, NA, stage:2, alive, 390 days	1461.1
DO48700	78 years, female, NA, stage:2, alive, 810 days	1455.7
DO48706	72 years, male, NA, stage:2, alive, 870 days	1447.6
DO48693	71 years, male, NA, stage:2, alive, 900 days	1399.2
DO48695	77 years, male, NA, stage:2, alive, 720 days	1389.9
DO45227	57 years, female, NA, stage:2, alive, 1020 days	1387.2
DO23540	73 years, male, NA, stage:1, alive, 750 days	1382.9
DO50783	62 years, male, NA, stage:3, alive, 480 days	1366.8
DO50850	74 years, male, NA, stage:3, alive, 720 days	1361.9
DO23538	67 years, male, NA, stage:2, alive, 450 days	1349.3
DO45125	58 years, male, NA, stage:3, alive, 1680 days	1344.1
DO23535	67 years, male, NA, stage:1, alive, 960 days	1342.6
DO50787	63 years, male, NA, stage:3, alive, 480 days	1341.7
DO227643	79 years, male, NA, stage:2, alive, 1260 days	1330.8
DO45207	68 years, male, NA, stage:1, alive, 1050 days	1323.2
DO48712	50 years, male, NA, stage:2, alive, 810 days	1318.2
DO45119	74 years, male, NA, stage:3, dead, 510 days	1271.0
DO45109	63 years, male, NA, stage:2, alive, 1590 days	1267.5
DO23541	65 years, male, NA, stage:2, alive, 930 days	1267.1
DO45159	65 years, male, NA, stage:3, alive, 1470 days	1249.6
DO227801	77 years, female, NA, stage:1, alive, 660 days	1244.0
DO50817	75 years, male, NA, stage:2, alive, 390 days	1242.5
DO45129	61 years, male, NA, stage:3, alive, 1470 days	1240.1
DO45096	69 years, male, NA, stage:2, dead, 1290 days	1227.0
DO23512	60 years, male, NA, stage:1, alive, 1260 days	1226.1
DO48704	68 years, female, NA, stage:3, alive, 750 days	1221.3
DO45115	81 years, male, NA, stage:2, alive, 840 days	1217.5
DO50825	70 years, male, NA, stage:2, alive, 390 days	1216.3
DO45092	62 years, male, NA, stage:4, dead, 1200 days	1213.3
DO45099	46 years, male, NA, stage:3, alive, 1590 days	1204.6
DO23517	62 years, male, NA, stage:2, alive, 1200 days	1196.8
DO23551	73 years, male, NA, stage:3, dead, 150 days	1176.0
DO45155	69 years, male, NA, stage:2, alive, 2160 days	1172.4
DO48761	55 years, male, NA, stage:2, alive, 870 days	1168.1
DO23531	78 years, female, NA, stage:3, alive, 900 days	1164.4
DO23509	60 years, male, NA, stage:3, dead, 780 days	1162.8
DO50840	49 years, male, NA, stage:2, alive, 330 days	1152.0
DO23510	80 years, female, NA, stage:2, alive, 870 days	1148.8
DO45101	63 years, male, NA, stage:2, alive, 1680 days	1147.5
DO50789	73 years, female, NA, stage:2, alive, 570 days	1144.5
DO45215	65 years, male, NA, stage:2, alive, 1170 days	1132.8
DO45133	64 years, male, NA, stage:3, dead, 660 days	1130.1
DO48679	72 years, male, NA, stage:2, alive, 1200 days	1120.1
DO23544	67 years, male, NA, stage:2, alive, 960 days	1095.9
DO23527	72 years, male, NA, stage:1, alive, 1050 days	1077.8
DO50807	67 years, male, NA, stage:1, alive, 540 days	1058.9
DO48681	57 years, male, NA, stage:2, alive, 900 days	1048.3
DO45091	56 years, male, NA, stage:2, dead, 1320 days	1046.3
DO50839	47 years, female, NA, stage:3, alive, 330 days	1029.1
DO50819	72 years, female, NA, stage:2, alive, 510 days	1018.7
DO50803	62 years, female, NA, stage:1, alive, 540 days	1006.6
DO48742	76 years, male, NA, stage:2, alive, 600 days	970.7
DO50818	65 years, male, NA, stage:2, alive, 510 days	955.0
DO48701	78 years, male, NA, stage:2, alive, 780 days	946.4
DO50845	72 years, male, NA, stage:3, alive, 210 days	945.9
DO45094	76 years, male, NA, stage:3, alive, 1650 days	944.9
DO45245	75 years, female, NA, stage:2, dead, 240 days	927.8
DO48721	58 years, female, NA, stage:1, alive, 900 days	927.1
DO45197	51 years, male, NA, stage:2, alive, 1170 days	919.5
DO45137	38 years, male, NA, stage:1, alive, 1320 days	913.2
DO48674	80 years, male, NA, stage:2, alive, 1260 days	902.5
DO23550	69 years, male, NA, stage:1, alive, 990 days	899.2
DO50776	75 years, male, NA, stage:1, alive, 690 days	889.6
DO23518	67 years, male, NA, stage:2, alive, 1320 days	864.7
DO48741	64 years, male, NA, stage:3, alive, 240 days	841.8
DO50774	68 years, female, NA, stage:2, alive, 720 days	821.3
DO48716	71 years, male, NA, stage:2, alive, 720 days	819.0
DO45107	63 years, female, NA, stage:2, alive, 1710 days	811.8
DO48760	70 years, female, NA, stage:2, alive, 690 days	810.9
DO48743	69 years, female, NA, stage:2, alive, 570 days	806.7
DO45195	62 years, male, NA, stage:1, alive, 390 days	803.7
DO23532	71 years, female, NA, stage:1, alive, 960 days	802.6
DO23552	80 years, female, NA, stage:1, alive, 810 days	779.4
DO45111	74 years, male, NA, stage:2, alive, 1590 days	773.6
DO23534	60 years, male, NA, stage:2, alive, 840 days	739.3
DO50808	68 years, male, NA, stage:2, alive, 570 days	669.0
DO45105	61 years, male, NA, stage:1, alive, 1680 days	657.8
DO45167	67 years, male, NA, stage:2, dead, 1440 days	619.8
DO50832	73 years, male, NA, stage:3, alive, 90 days	470.5
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
537	Tumor	0.7
557	Tumor	0.7
367	Tumor	0.5
1021	Tumor	0.5
567	Tumor	0.5
327	Tumor	0.5
965	Tumor	0.4
937	Tumor	0.4
285	Tumor	0.4
815	Tumor	0.4
131	Tumor	0.4
957	Tumor	0.4
393	Tumor	0.4
685	Tumor	0.3
523	Tumor	0.3
951	Tumor	0.3
533	Tumor	0.3
413	Tumor	0.3
1027	Tumor	0.3
727	Tumor	0.3
545	Tumor	0.3
743	Tumor	0.3
661	Tumor	0.3
983	Tumor	0.3
851	Tumor	0.2
535	Tumor	0.2
573	Tumor	0.2
473	Tumor	0.2
967	Tumor	0.2
1025	Tumor	0.2
697	Tumor	0.2
385	Tumor	0.2
223	Tumor	0.2
135	Tumor	0.2
355	Tumor	0.2
471	Tumor	0.2
467	Tumor	0.2
525	Tumor	0.2
113	Tumor	0.2
527	Tumor	0.2
395	Tumor	0.2
955	Tumor	0.2
331	Tumor	0.2
745	Tumor	0.2
953	Tumor	0.2
865	Tumor	0.2
267	Tumor	0.2
353	Tumor	0.2
497	Tumor	0.2
387	Tumor	0.2
554	Normal	0.2
777	Tumor	0.2
981	Tumor	0.2
715	Tumor	0.2
431	Tumor	0.1
778	Normal	0.1
517	Tumor	0.1
427	Tumor	0.1
421	Tumor	0.1
1031	Tumor	0.1
755	Tumor	0.1
443	Tumor	0.1
923	Tumor	0.1
257	Tumor	0.1
351	Tumor	0.1
938	Normal	0.1
536	Normal	0.1
966	Normal	0.1
737	Tumor	0.1
756	Normal	0.1
227	Tumor	0.1
448	Normal	0.1
187	Tumor	0.1
518	Normal	0.1
617	Tumor	0.1
1015	Tumor	0.1
817	Tumor	0.1
724	Normal	0.1
451	Tumor	0.1
136	Normal	0.1
546	Normal	0.1
445	Tumor	0.1
696	Normal	0.1
785	Tumor	0.1
1026	Normal	0.1
918	Normal	0.1
412	Normal	0.1
746	Normal	0.1
231	Tumor	0.1
922	Normal	0.1
943	Tumor	0.1
477	Tumor	0.1
515	Tumor	0.1
952	Normal	0.1
524	Normal	0.1
411	Tumor	0.1
1043	Tumor	0.1
214	Normal	0.1
695	Tumor	0.0
375	Tumor	0.0
392	Normal	0.0
195	Tumor	0.0
211	Tumor	0.0
636	Normal	0.0
452	Normal	0.0
944	Normal	0.0
434	Normal	0.0
516	Normal	0.0
111	Normal	0.0
864	Normal	0.0
862	Normal	0.0
861	Tumor	0.0
553	Tumor	0.0
171	Tumor	0.0
647	Tumor	0.0
455	Tumor	0.0
963	Tumor	0.0
913	Tumor	0.0
147	Tumor	0.0
873	Tumor	0.0
161	Tumor	0.0
538	Normal	0.0
124	Normal	0.0
185	Tumor	0.0
425	Tumor	0.0
137	Tumor	0.0
926	Normal	0.0
915	Tumor	0.0
128	Normal	0.0
526	Normal	0.0
213	Tumor	0.0
686	Normal	0.0
142	Normal	0.0
145	Tumor	0.0
433	Tumor	0.0
436	Normal	0.0
435	Tumor	0.0
534	Normal	0.0
1028	Normal	0.0
172	Normal	0.0
465	Tumor	0.0
358	Normal	0.0
823	Tumor	0.0
493	Tumor	0.0
1016	Normal	0.0
1013	Tumor	0.0
474	Normal	0.0
492	Normal	0.0
186	Normal	0.0
571	Tumor	0.0
212	Normal	0.0
271	Tumor	0.0
162	Normal	0.0
342	Normal	0.0
878	Normal	0.0
975	Tumor	0.0
362	Normal	0.0
114	Normal	0.0
1014	Normal	0.0
968	Normal	0.0
721	Tumor	0.0
916	Normal	0.0
218	Normal	0.0
1041	Tumor	0.0
463	Tumor	0.0
365	Tumor	0.0
1022	Normal	0.0
466	Normal	0.0
394	Normal	0.0
423	Tumor	0.0
376	Normal	0.0
484	Normal	0.0
924	Normal	0.0
261	Tumor	0.0
447	Tumor	0.0
738	Normal	0.0
368	Normal	0.0
344	Normal	0.0
723	Tumor	0.0
698	Normal	0.0
112	Tumor	0.0
283	Tumor	0.0
852	Normal	0.0
956	Normal	-0.1
258	Normal	-0.1
866	Normal	-0.1
786	Normal	-0.1
461	Tumor	-0.1
356	Normal	-0.1
363	Tumor	-0.1
1046	Normal	-0.1
742	Normal	-0.1
141	Tumor	-0.1
462	Normal	-0.1
228	Normal	-0.1
314	Normal	-0.1
481	Tumor	-0.1
921	Tumor	-0.1
964	Normal	-0.1
925	Tumor	-0.1
132	Normal	-0.1
357	Tumor	-0.1
558	Normal	-0.1
857	Tumor	-0.1
272	Normal	-0.1
881	Tumor	-0.1
232	Normal	-0.1
262	Normal	-0.1
221	Tumor	-0.1
977	Tumor	-0.1
222	Normal	-0.1
483	Tumor	-0.1
618	Normal	-0.1
286	Normal	-0.1
146	Normal	-0.1
816	Normal	-0.1
422	Normal	-0.1
196	Normal	-0.1
488	Normal	-0.1
984	Normal	-0.1
446	Normal	-0.1
917	Tumor	-0.1
138	Normal	-0.1
396	Normal	-0.1
883	Tumor	-0.1
1032	Normal	-0.1
277	Tumor	-0.1
313	Tumor	-0.1
386	Normal	-0.1
728	Normal	-0.1
352	Normal	-0.1
958	Normal	-0.1
568	Normal	-0.1
982	Normal	-0.1
343	Tumor	-0.1
432	Normal	-0.1
716	Normal	-0.1
814	Normal	-0.1
297	Tumor	-0.1
663	Tumor	-0.1
628	Normal	-0.1
813	Tumor	-0.1
662	Normal	-0.1
217	Tumor	-0.1
877	Tumor	-0.1
824	Normal	-0.1
914	Normal	-0.1
713	Tumor	-0.1
978	Normal	-0.1
1042	Normal	-0.1
867	Tumor	-0.1
284	Normal	-0.1
514	Normal	-0.1
572	Normal	-0.1
564	Normal	-0.1
882	Normal	-0.1
1044	Normal	-0.1
976	Normal	-0.1
332	Normal	-0.1
298	Normal	-0.1
188	Normal	-0.1
664	Normal	-0.1
328	Normal	-0.1
414	Normal	-0.1
513	Tumor	-0.1
366	Normal	-0.1
341	Tumor	-0.1
563	Tumor	-0.2
858	Normal	-0.2
125	Tumor	-0.2
954	Normal	-0.2
615	Tumor	-0.2
364	Normal	-0.2
744	Normal	-0.2
388	Normal	-0.2
361	Tumor	-0.2
616	Normal	-0.2
148	Normal	-0.2
487	Tumor	-0.2
123	Tumor	-0.2
574	Normal	-0.2
278	Normal	-0.2
642	Normal	-0.2
648	Normal	-0.2
494	Normal	-0.2
468	Normal	-0.2
126	Normal	-0.2
312	Normal	-0.2
472	Normal	-0.2
635	Tumor	-0.2
911	Tumor	-0.2
464	Normal	-0.2
191	Tumor	-0.2
874	Normal	-0.2
671	Tumor	-0.2
415	Tumor	-0.2
444	Normal	-0.2
354	Normal	-0.2
224	Normal	-0.2
426	Normal	-0.2
1045	Tumor	-0.2
528	Normal	-0.2
722	Normal	-0.2
478	Normal	-0.2
383	Tumor	-0.2
127	Tumor	-0.2
391	Tumor	-0.2
884	Normal	-0.2
912	Normal	-0.2
268	Normal	-0.2
665	Tumor	-0.3
672	Normal	-0.3
666	Normal	-0.3
428	Normal	-0.3
491	Tumor	-0.3
714	Normal	-0.3
424	Normal	-0.3
456	Normal	-0.3
863	Tumor	-0.3
868	Normal	-0.3
384	Normal	-0.3
311	Tumor	-0.3
741	Tumor	-0.3
416	Normal	-0.3
627	Tumor	-0.3
641	Tumor	-0.4
498	Normal	-0.4
192	Normal	-0.4
482	Normal	-0.4
818	Normal	-0.5
Show allShow less

LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA031153	Antibody CAB004027
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS