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CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS6 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 1551.49
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 2480.3
Number of samples 497
Samples
Sample Description pTPM
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 12473.6
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 9581.7
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 8340.9
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 8211.3
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 8164.8
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 8063.8
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 7920.2
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 7548.7
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 7265.9
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 7166.4
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 6942.9
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 6849.7
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 6671.3
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 6489.2
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 6284.9
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 5958.1
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 5900.4
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 5824.3
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 5651.0
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 5536.1
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 5431.4
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 5425.2
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 5271.4
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 5066.6
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 5063.3
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 4904.5
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 4848.4
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 4848.1
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 4815.1
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 4768.1
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 4676.6
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 4630.0
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 4589.3
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 4579.6
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 4531.3
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 4522.2
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 4517.8
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 4497.9
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 4489.2
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 4444.6
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 4344.3
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 4248.0
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 4233.8
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 4193.8
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 4145.7
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 4136.8
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 4117.7
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 4117.6
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 4088.9
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 4088.8
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 4021.4
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 4007.7
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 3967.5
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 3905.7
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 3904.7
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 3899.9
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 3845.8
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 3823.0
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 3807.0
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 3784.1
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 3762.2
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 3759.6
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 3739.3
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 3732.1
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 3728.4
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 3715.0
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 3700.7
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 3694.3
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 3654.6
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 3591.6
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 3582.3
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 3578.2
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 3559.0
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 3549.2
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 3539.5
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 3535.9
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 3506.6
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 3506.2
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 3477.3
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 3473.8
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 3473.3
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 3465.9
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 3444.7
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 3398.8
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 3394.3
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 3387.4
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 3378.0
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 3335.2
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 3318.2
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 3306.3
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 3300.9
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 3275.0
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 3251.5
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 3230.2
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 3229.7
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 3216.3
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 3216.2
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 3212.2
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 3196.3
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 3185.1
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 3173.7
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 3173.2
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 3155.5
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 3150.7
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 3149.3
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 3138.8
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 3113.9
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 3101.1
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 3079.6
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 3041.3
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 3034.4
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 3029.7
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 2992.7
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 2990.8
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 2985.1
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 2981.2
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 2977.5
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 2966.3
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 2954.8
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 2953.3
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 2944.9
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 2927.7
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 2919.1
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 2916.0
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 2915.9
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 2902.8
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 2893.7
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 2873.3
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 2863.2
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 2853.9
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 2851.9
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 2846.7
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 2844.3
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 2842.7
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 2833.6
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 2832.7
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 2825.4
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 2819.5
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 2803.4
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 2799.1
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 2787.7
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 2787.2
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 2774.6
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 2766.8
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 2749.7
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 2744.3
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 2737.4
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 2728.6
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 2726.1
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 2724.0
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 2722.5
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 2709.7
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 2703.7
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 2693.3
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 2685.0
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 2683.8
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 2667.5
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 2648.9
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 2645.4
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 2642.3
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 2631.6
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 2630.4
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 2620.0
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 2619.1
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 2614.9
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 2611.1
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 2609.0
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 2600.8
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 2600.4
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 2595.6
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 2572.0
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 2571.0
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 2569.7
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 2567.8
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 2565.3
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 2562.0
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 2559.9
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 2557.7
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 2546.4
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 2543.3
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 2539.0
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 2538.0
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 2520.4
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 2513.1
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 2508.0
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 2507.8
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 2498.8
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 2479.6
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 2478.3
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 2473.4
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 2460.6
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 2446.0
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 2442.8
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 2414.6
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 2406.5
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 2403.7
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 2403.2
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 2392.1
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 2380.2
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 2375.8
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 2374.1
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 2367.1
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 2363.4
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 2354.8
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 2349.7
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 2349.7
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 2313.2
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 2312.7
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 2312.0
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 2300.4
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 2297.8
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 2296.2
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 2289.2
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 2288.5
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 2285.4
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 2272.0
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 2265.7
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 2264.1
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 2263.7
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 2261.6
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 2255.3
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 2250.6
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 2247.1
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 2239.4
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 2236.3
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 2222.7
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 2215.8
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 2215.4
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 2202.5
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 2199.2
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 2196.3
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 2191.6
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 2189.8
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 2183.8
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 2166.4
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 2151.7
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 2146.2
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 2142.2
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 2141.4
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 2141.3
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 2136.1
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 2134.8
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 2132.2
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 2129.4
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 2119.0
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 2116.0
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 2110.3
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 2109.8
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 2105.1
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 2104.2
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 2101.8
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 2097.7
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 2094.3
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 2092.4
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 2084.7
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 2071.2
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 2071.0
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 2055.4
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 2055.3
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 2054.9
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 2051.2
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 2046.0
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 2037.4
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 2018.5
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 2011.8
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 2009.4
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 1997.2
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 1997.0
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 1990.5
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 1981.8
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 1980.6
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 1979.7
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 1970.3
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 1967.4
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 1966.9
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 1964.6
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 1963.8
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 1958.3
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 1958.0
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 1955.1
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 1952.4
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 1951.5
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 1950.2
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 1941.3
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 1933.0
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 1926.0
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 1922.4
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 1919.0
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 1916.7
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 1914.9
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 1913.5
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 1911.5
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 1909.4
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 1906.2
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 1897.1
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 1896.7
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 1895.0
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 1891.4
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 1880.4
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 1878.2
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 1867.2
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 1866.7
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 1864.3
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 1863.7
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 1850.7
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 1850.1
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 1849.0
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 1845.4
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 1844.4
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 1842.4
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 1842.1
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 1837.4
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 1832.6
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 1828.5
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 1820.6
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 1820.4
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 1792.2
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 1791.5
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 1790.4
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 1789.4
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 1786.7
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 1783.1
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 1782.7
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 1774.6
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 1768.0
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 1766.6
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 1762.0
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 1759.0
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 1756.8
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 1750.0
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 1747.7
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 1744.9
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 1743.1
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 1736.9
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 1734.8
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 1732.3
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 1725.3
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 1722.7
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 1719.9
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 1719.0
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 1713.2
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 1703.0
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 1702.6
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 1690.5
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 1688.6
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 1687.7
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 1683.4
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 1680.2
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 1679.9
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 1678.4
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 1677.6
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 1676.6
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 1674.7
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 1674.5
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 1669.7
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 1663.0
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 1652.2
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 1651.7
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 1647.4
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 1645.3
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 1641.4
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 1634.7
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 1631.0
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 1624.0
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 1623.7
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 1619.3
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 1612.7
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 1611.7
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 1611.0
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 1610.6
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 1609.6
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 1607.5
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 1605.1
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 1603.9
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 1599.7
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 1589.2
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 1586.0
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 1580.6
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 1578.8
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 1575.7
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 1573.1
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 1569.5
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 1565.4
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 1559.2
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 1559.0
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 1551.8
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 1551.2
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 1547.9
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 1531.2
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 1530.0
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 1529.2
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 1525.1
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 1514.8
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 1509.6
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 1507.1
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 1500.4
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 1500.3
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 1498.5
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 1495.6
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 1495.1
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 1494.9
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 1493.1
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 1483.6
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 1475.6
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 1462.2
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 1462.1
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 1457.1
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 1455.1
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 1445.0
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 1439.2
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 1435.5
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 1431.8
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 1429.1
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 1426.5
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 1412.8
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 1409.3
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 1409.0
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 1404.5
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 1398.7
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 1384.8
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 1375.1
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 1372.9
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 1360.2
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 1355.5
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 1352.3
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 1347.8
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 1341.8
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 1339.1
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 1332.7
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 1332.1
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 1331.8
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 1322.8
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 1320.4
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 1312.9
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 1311.1
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 1309.9
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 1308.7
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 1306.0
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 1302.6
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 1293.7
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 1289.1
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 1283.2
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 1281.4
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 1280.6
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 1275.1
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 1273.0
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 1264.3
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 1263.7
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 1260.9
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 1257.4
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 1249.4
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 1247.8
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 1247.5
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 1242.5
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 1240.8
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 1236.4
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 1230.6
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 1225.9
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 1222.4
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 1217.8
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 1208.5
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 1206.8
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 1200.3
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 1152.1
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 1147.0
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 1141.5
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 1136.4
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 1135.5
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 1130.0
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 1124.9
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 1101.4
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 1080.2
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 1067.0
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 1065.6
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 1064.6
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 1061.7
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 1056.7
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 1053.5
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 1046.0
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 1038.7
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 1020.1
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 1011.1
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 1010.8
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 1000.8
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 999.6
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 995.1
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 979.7
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 974.2
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 962.1
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 949.4
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 945.0
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 924.8
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 910.1
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 887.1
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 834.8
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 828.9
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 754.7
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS6 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 1347.23
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 1987.5
Number of samples 105
Samples
Sample Description pTPM
L851 70 years, male, stage:Stage IB, dead, 1315 days 6528.0
L683 77 years, female, stage:Stage IIA, dead, 612 days 5442.5
L616 54 years, male, stage:Stage IA, dead, 410 days 5134.5
L827 70 years, male, stage:Stage IIB, dead, 1105 days 4941.1
L561 62 years, female, stage:Stage IA, alive, 2543 days 4832.4
L630 65 years, female, stage:Stage IA, dead, 1733 days 4695.0
L773 64 years, female, stage:Stage IV, dead, 311 days 3575.8
L566 58 years, male, stage:Stage IB, alive, 2489 days 3413.9
L731 59 years, female, stage:Stage IA, dead, 964 days 3338.4
L662 66 years, male, stage:Stage IA, dead, 865 days 3164.4
L791 66 years, female, stage:Stage IIIA, dead, 368 days 2978.4
L473 66 years, female, stage:Stage IA, alive, 3021 days 2901.8
L842 62 years, female, stage:Stage IB, alive, 2005 days 2881.8
L879 75 years, male, stage:Stage IV, dead, 873 days 2813.2
L462 67 years, male, stage:Stage IIIA, dead, 568 days 2797.0
L782 73 years, female, stage:Stage IIB, alive, 3371 days 2749.9
L850 77 years, male, stage:Stage IIIA, dead, 997 days 2717.9
L682 64 years, female, stage:Stage IIB, dead, 840 days 2600.5
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 2458.3
L593 78 years, male, stage:Stage IA, dead, 2436 days 2431.1
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 2419.6
L749 49 years, female, stage:Stage IIIA, dead, 189 days 2398.8
L605 74 years, female, stage:Stage IA, alive, 2460 days 2371.5
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 2339.1
L816 73 years, female, stage:Stage IIA, dead, 353 days 2215.3
L565 59 years, female, stage:Stage IB, dead, 543 days 2215.0
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 2180.6
L458 76 years, female, stage:Stage IA, dead, 223 days 2117.1
L885 62 years, female, stage:Stage IA, alive, 1618 days 2108.8
L873 62 years, female, stage:Stage IA, alive, 1740 days 2107.9
L872 71 years, female, stage:Stage IA, alive, 1793 days 2087.1
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 2078.7
L688 57 years, male, stage:Stage IIIA, dead, 789 days 2072.2
L875 69 years, female, stage:Stage IA, alive, 1675 days 2061.2
L877 70 years, female, stage:Stage IA, alive, 1599 days 2044.3
L439 80 years, male, stage:Stage IIB, dead, 2773 days 2038.4
L867 62 years, female, stage:Stage IIIA, dead, 317 days 1968.8
L890 56 years, female, stage:Stage IIB, dead, 1264 days 1968.1
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 1945.8
L766 59 years, male, stage:Stage IB, alive, 1793 days 1926.2
L728 77 years, male, stage:Stage IIB, dead, 1128 days 1926.1
L800 66 years, female, stage:Stage IA, dead, 2417 days 1903.3
L746 64 years, female, stage:Stage IIIA, dead, 594 days 1873.8
L603 70 years, female, stage:Stage IB, dead, 972 days 1855.0
L829 76 years, male, stage:Stage IA, alive, 2173 days 1843.0
L738 74 years, female, stage:Stage IB, dead, 1314 days 1811.7
L865 75 years, female, stage:Stage IIB, alive, 1927 days 1800.2
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 1796.6
L446 71 years, female, stage:Stage IIB, dead, 415 days 1796.2
L557 81 years, female, stage:Stage IB, alive, 2580 days 1785.3
L871 74 years, male, stage:Stage IB, dead, 873 days 1749.4
L617 68 years, male, stage:Stage IIIA, dead, 238 days 1743.9
L400 78 years, male, stage:Stage IIA, dead, 1233 days 1742.0
L596 74 years, female, stage:Stage IA, alive, 2319 days 1707.9
L656 58 years, male, stage:Stage IA, alive, 2227 days 1695.5
L606 55 years, male, stage:Stage IA, alive, 2336 days 1695.5
L546 57 years, male, stage:Stage IA, dead, 973 days 1684.5
L601 75 years, male, stage:Stage IB, dead, 2068 days 1683.1
L493 56 years, female, stage:Stage IIB, alive, 2945 days 1658.9
L545 60 years, female, stage:Stage IA, alive, 2874 days 1658.3
L810 64 years, female, stage:Stage IIIA, dead, 625 days 1650.2
L638 65 years, male, stage:Stage IA, alive, 2076 days 1608.7
L585 70 years, female, stage:Stage IIA, dead, 402 days 1601.1
L808 48 years, female, stage:Stage IA, alive, 3001 days 1592.4
L887 77 years, male, stage:Stage IA, dead, 374 days 1590.4
L838 71 years, female, stage:Stage IA, dead, 1005 days 1571.3
L828 68 years, female, stage:Stage IIB, alive, 2222 days 1548.7
L673 74 years, female, stage:Stage IA, dead, 568 days 1543.8
L703 71 years, male, stage:Stage IIA, dead, 1137 days 1537.2
L569 76 years, female, stage:Stage IA, alive, 2531 days 1503.6
L710 72 years, female, stage:Stage IIA, alive, 1775 days 1499.5
L532 69 years, female, stage:Stage IA, dead, 301 days 1482.7
L826 45 years, female, stage:Stage IV, dead, 935 days 1451.0
L404 74 years, female, stage:Stage IIA, dead, 2318 days 1448.2
L695 68 years, female, stage:Stage IB, dead, 1762 days 1445.9
L778 65 years, female, stage:Stage IA, alive, 1600 days 1440.9
L413 72 years, female, stage:Stage IIIA, dead, 313 days 1434.2
L531 74 years, male, stage:Stage IB, dead, 928 days 1415.1
L541 70 years, female, stage:Stage IIIA, dead, 915 days 1379.6
L613 72 years, male, stage:Stage IIIA, dead, 19 days 1378.2
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 1362.4
L620 70 years, female, stage:Stage IIIA, dead, 338 days 1347.2
L689 69 years, male, stage:Stage IA, alive, 1943 days 1327.3
L880 75 years, female, stage:Stage IA, alive, 1767 days 1321.2
L602 69 years, female, stage:Stage IA, alive, 2277 days 1320.7
L551 62 years, male, stage:Stage IA, alive, 2924 days 1314.8
L530 76 years, female, stage:Stage IIA, dead, 308 days 1303.3
L735 75 years, female, stage:Stage IA, alive, 1830 days 1274.4
L663 62 years, female, stage:Stage IB, alive, 2018 days 1234.4
L725 64 years, female, stage:Stage IA, alive, 1830 days 1233.2
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 1203.6
L832 65 years, female, stage:Stage IA, alive, 2145 days 1189.2
L768 60 years, male, stage:Stage IIIA, dead, 472 days 1178.4
L543 65 years, male, stage:Stage IA, alive, 2711 days 1174.9
L440 80 years, male, stage:Stage IIB, dead, 651 days 1153.6
L455 52 years, female, stage:Stage IA, alive, 3315 days 1152.9
L626 76 years, female, stage:Stage IA, dead, 1994 days 1110.2
L678 65 years, female, stage:Stage IB, dead, 1114 days 1036.1
L802 62 years, female, stage:Stage IA, dead, 773 days 978.1
L484 64 years, female, stage:Stage IA, alive, 2895 days 956.7
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 891.3
L504 65 years, female, stage:Stage IA, dead, 1295 days 864.1
L607 59 years, male, stage:Stage IB, alive, 2572 days 844.9
L599 80 years, male, stage:Stage IB, dead, 2083 days 687.9
L831 62 years, female, stage:Stage IB, alive, 2152 days 637.4
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS6 is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 2851.02
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 2456.1
Number of samples 489
Samples
Sample Description pTPM
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 10894.9
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 9994.2
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 9721.9
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 9680.2
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 9507.9
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 8513.4
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 8203.2
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 8128.0
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 7789.2
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 7732.0
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 7679.3
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 7357.0
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 7200.8
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 7083.5
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 7004.5
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 6967.4
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 6524.1
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 6468.0
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 6443.9
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 6325.7
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 6223.8
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 6040.4
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 6000.6
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 5841.6
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 5813.4
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 5666.8
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 5400.5
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 5326.3
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 5251.7
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 4763.6
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 4605.2
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 4522.2
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 4352.8
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 4344.4
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 4299.0
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 4251.6
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 4233.7
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 4219.8
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 4135.1
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 4110.0
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 4098.9
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 4091.7
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 4081.3
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 4073.6
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 3951.9
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 3951.7
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 3951.5
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 3920.8
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 3894.2
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 3870.3
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 3859.7
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 3853.6
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 3838.5
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 3818.4
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 3816.8
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 3811.6
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 3797.3
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 3782.2
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 3768.1
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 3759.6
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 3758.8
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 3702.7
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 3659.3
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 3624.8
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 3601.8
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 3568.0
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 3540.5
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 3532.4
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 3506.0
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 3478.4
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 3444.9
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 3441.8
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 3441.6
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 3415.0
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 3395.6
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 3392.5
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 3386.6
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 3370.7
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 3370.2
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 3363.4
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 3321.2
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 3303.7
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 3289.1
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 3285.0
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 3279.7
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 3237.1
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 3213.9
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 3206.2
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 3191.8
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 3188.6
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 3117.7
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 3094.6
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 3089.6
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 3068.0
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 3038.3
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 3029.3
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 3027.0
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 3020.5
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 3019.7
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 2999.1
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 2988.3
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 2979.6
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 2976.7
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 2967.5
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 2967.3
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 2923.9
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 2923.0
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 2907.5
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 2906.9
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 2899.4
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 2898.9
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 2898.3
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 2889.4
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 2881.5
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 2880.8
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 2877.1
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 2863.6
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 2851.0
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 2850.1
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 2846.1
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 2840.6
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 2794.1
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 2789.2
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 2788.9
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 2788.7
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 2786.5
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 2781.8
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 2780.0
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 2772.6
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 2765.0
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 2764.1
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 2748.3
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 2734.9
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 2726.5
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 2717.5
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 2710.1
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 2703.5
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 2696.4
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 2694.1
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 2688.9
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 2661.7
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 2648.2
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 2646.9
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 2644.0
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 2618.7
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 2607.6
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 2600.8
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 2593.4
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 2588.6
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 2579.5
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 2575.2
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 2570.1
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 2566.2
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 2545.6
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 2537.6
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 2535.2
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 2509.5
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 2506.0
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 2492.4
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 2488.3
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 2480.2
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 2478.2
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 2475.7
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 2469.4
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 2467.8
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 2465.1
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 2457.5
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 2445.9
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 2445.7
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 2426.2
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 2422.1
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 2415.5
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 2412.7
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 2411.5
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 2410.1
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 2407.1
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 2400.8
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 2397.8
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 2394.1
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 2387.4
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 2369.6
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 2358.3
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 2357.5
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 2355.6
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 2352.9
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 2352.8
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 2348.4
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 2346.1
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 2337.9
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 2334.8
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 2330.0
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 2329.1
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 2323.3
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 2322.1
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 2314.1
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 2312.5
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 2311.8
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 2303.7
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 2303.2
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 2303.1
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 2298.4
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 2291.8
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 2289.2
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 2282.6
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 2280.2
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 2269.4
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 2267.1
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 2264.1
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 2263.8
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 2261.6
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 2251.7
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 2249.3
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 2244.0
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 2242.7
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 2242.5
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 2236.0
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 2233.5
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 2232.9
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 2231.0
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 2227.6
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 2225.3
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 2214.0
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 2205.8
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 2202.8
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 2200.2
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 2191.6
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 2189.2
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 2181.8
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 2172.7
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 2162.0
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 2161.4
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 2160.2
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 2158.6
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 2156.7
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 2155.8
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 2153.3
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 2147.9
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 2147.7
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 2147.6
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 2144.6
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 2143.7
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 2139.2
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 2130.9
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 2126.4
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 2125.4
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 2119.0
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 2118.4
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 2115.5
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 2100.2
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 2099.0
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 2097.0
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 2096.2
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 2095.5
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 2093.4
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 2091.5
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 2088.1
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 2086.4
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 2075.1
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 2075.1
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 2068.2
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 2040.2
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 2039.6
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 2039.3
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 2028.0
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 2005.5
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 2002.2
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 2001.9
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 2000.7
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 1988.9
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 1983.8
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 1974.6
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 1973.0
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 1972.0
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 1965.6
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 1961.5
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 1955.8
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 1950.0
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 1946.8
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 1943.5
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 1937.1
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 1935.8
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 1934.8
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 1927.9
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 1924.7
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 1924.3
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 1923.8
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 1919.6
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 1910.8
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 1906.2
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 1905.0
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 1904.0
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 1903.7
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 1896.4
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 1893.9
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 1888.4
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 1881.7
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 1867.7
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 1856.3
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 1847.5
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 1838.7
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 1836.8
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 1831.9
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 1826.2
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 1825.8
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 1820.9
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 1820.8
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 1820.7
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 1816.2
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 1806.1
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 1805.6
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 1802.0
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 1796.9
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 1794.3
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 1791.7
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 1790.9
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 1785.0
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 1783.6
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 1781.4
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 1778.2
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 1772.4
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 1767.0
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 1758.6
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 1741.6
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 1741.0
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 1739.9
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 1737.3
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 1736.9
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 1734.6
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 1733.0
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 1717.7
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 1714.8
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 1706.5
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 1702.8
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 1702.6
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 1694.1
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 1675.9
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 1668.9
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 1664.2
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 1662.7
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 1661.4
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 1661.0
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 1648.3
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 1639.8
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 1633.9
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 1630.5
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 1622.0
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 1618.0
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 1615.2
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 1603.9
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 1602.6
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 1598.3
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 1595.2
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 1592.8
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 1591.4
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 1590.8
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 1588.1
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 1585.4
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 1575.4
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 1571.9
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 1563.4
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 1557.0
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 1549.4
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 1547.8
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 1545.4
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 1541.7
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 1530.4
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 1530.1
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 1528.3
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 1525.8
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 1525.3
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 1524.9
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 1518.7
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 1512.4
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 1506.1
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 1505.6
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 1503.6
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 1500.0
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 1497.6
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 1495.9
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 1491.5
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 1484.9
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 1478.6
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 1473.7
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 1469.9
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 1468.8
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 1462.3
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 1460.6
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 1459.2
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 1458.2
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 1440.4
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 1433.8
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 1429.2
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 1428.1
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 1428.0
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 1426.8
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 1407.2
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 1405.8
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 1401.5
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 1399.1
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 1398.7
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 1397.2
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 1395.8
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 1385.4
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 1373.5
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 1369.9
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 1363.5
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 1361.3
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 1348.5
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 1343.4
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 1341.5
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 1340.8
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 1328.0
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 1321.0
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 1317.7
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 1316.3
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 1311.9
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 1311.8
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 1302.4
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 1296.6
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 1285.8
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 1283.4
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 1277.4
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 1275.1
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 1274.3
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 1269.6
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 1265.3
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 1264.6
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 1262.5
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 1258.8
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 1250.3
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 1242.9
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 1239.0
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 1226.2
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 1220.0
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 1210.5
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 1203.6
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 1175.2
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 1171.8
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 1171.1
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 1167.0
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 1161.8
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 1161.2
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 1160.1
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 1155.6
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 1152.7
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 1141.6
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 1132.4
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 1129.4
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 1129.3
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 1121.3
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 1104.5
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 1100.9
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 1081.6
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 1078.5
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 1066.7
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 1059.8
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 1054.4
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 1054.2
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 1053.8
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 1053.7
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 1053.3
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 1053.3
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 1050.8
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 1046.2
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 1040.7
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 1039.3
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 1030.8
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 1022.0
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 1020.2
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 998.0
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 996.1
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 989.5
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 982.2
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 981.4
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 965.4
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 945.4
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 930.0
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 928.8
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 920.1
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 912.5
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 908.4
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 893.3
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 876.0
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 869.7
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 857.5
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 808.1
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 799.8
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 791.2
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 764.7
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS6 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 1287.05
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 1778.5
Number of samples 68
Samples
Sample Description pTPM
L488 61 years, female, stage:Stage IIA, alive, 2993 days 4918.5
L466 65 years, female, stage:Stage IIIA, dead, 412 days 3660.3
L650 69 years, female, stage:Stage IB, dead, 986 days 3582.5
L457 46 years, female, stage:Stage IIA, alive, 2901 days 3572.2
L744 75 years, male, stage:Stage IA, alive, 1614 days 3371.0
L464 66 years, male, stage:Stage IB, dead, 1935 days 3224.7
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 2918.4
L820 73 years, female, stage:Stage IA, alive, 2405 days 2915.0
L736 67 years, male, stage:Stage IA, dead, 1195 days 2423.5
L534 66 years, male, stage:Stage IIA, alive, 2693 days 2420.1
L496 77 years, male, stage:Stage IB, alive, 2761 days 2362.7
L739 49 years, female, stage:Stage IIIA, dead, 352 days 2314.3
L633 77 years, female, stage:Stage IA, alive, 2102 days 2197.1
L470 78 years, female, stage:Stage IB, dead, 1774 days 2075.7
L420 57 years, female, stage:Stage IIB, dead, 295 days 2002.2
L753 61 years, male, stage:Stage IIA, alive, 1705 days 1950.0
L459 75 years, male, stage:Stage IIA, alive, 3181 days 1923.1
L468 53 years, male, stage:Stage IB, alive, 3004 days 1884.8
L456 48 years, male, stage:Stage IIA, dead, 1660 days 1857.1
L723 67 years, male, stage:Stage IIA, dead, 433 days 1826.3
L447 67 years, male, stage:Stage IIB, alive, 3203 days 1802.4
L604 67 years, male, stage:Stage IIA, dead, 286 days 1797.7
L881 70 years, male, stage:Stage IB, alive, 1752 days 1780.9
L644 67 years, male, stage:Stage IA, dead, 282 days 1754.8
L852 64 years, male, stage:Stage IB, dead, 700 days 1750.0
L539 78 years, male, stage:Stage IB, dead, 370 days 1732.8
L608 73 years, male, stage:Stage IA, alive, 2350 days 1725.2
L483 65 years, male, stage:Stage IB, dead, 77 days 1723.6
L818 67 years, male, stage:Stage IB, alive, 2480 days 1716.3
L661 66 years, male, stage:Stage IA, dead, 1123 days 1701.8
L854 62 years, female, stage:Stage IB, alive, 2256 days 1699.7
L442 75 years, female, stage:Stage IB, dead, 2433 days 1679.5
L857 69 years, male, stage:Stage IB, dead, 226 days 1650.4
L472 71 years, male, stage:Stage IB, dead, 423 days 1646.3
L758 84 years, male, stage:Stage IA, dead, 1562 days 1641.3
L490 58 years, male, stage:Stage IA, dead, 716 days 1635.4
L715 69 years, female, stage:Stage IIIA, dead, 150 days 1619.9
L444 74 years, female, stage:Stage IIB, alive, 3337 days 1608.6
L886 71 years, male, stage:Stage IB, dead, 1932 days 1523.4
L824 70 years, male, stage:Stage IA, dead, 665 days 1502.0
L652 82 years, male, stage:Stage IA, dead, 5 days 1500.3
L559 72 years, male, stage:Stage IIB, alive, 2615 days 1472.6
L592 61 years, male, stage:Stage IB, alive, 2368 days 1439.9
L767 67 years, male, stage:Stage IA, alive, 1718 days 1414.9
L568 77 years, female, stage:Stage IIB, dead, 71 days 1403.2
L406 64 years, male, stage:Stage IA, alive, 3057 days 1400.1
L563 61 years, female, stage:Stage IIB, dead, 1216 days 1381.9
L755 82 years, male, stage:Stage IIA, dead, 227 days 1372.8
L747 74 years, female, stage:Stage IA, dead, 1112 days 1303.0
L655 62 years, male, stage:Stage IIA, dead, 1603 days 1287.1
L788 54 years, female, stage:Stage IA, alive, 3385 days 1284.6
L864 66 years, female, stage:Stage IA, alive, 2192 days 1245.6
L642 67 years, male, stage:Stage IB, dead, 1167 days 1240.2
L856 69 years, male, stage:Stage IA, dead, 1465 days 1238.0
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 1235.4
L884 71 years, male, stage:Stage IIA, alive, 1627 days 1204.5
L712 61 years, male, stage:Stage IA, alive, 1698 days 1200.6
L760 80 years, male, stage:Stage IIA, alive, 1895 days 1192.3
L685 71 years, female, stage:Stage IIB, alive, 1944 days 1149.2
L586 67 years, male, stage:Stage IIA, dead, 784 days 1148.9
L529 79 years, female, stage:Stage IA, alive, 2775 days 1147.9
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 1120.7
L860 77 years, male, stage:Stage IA, alive, 2056 days 1064.0
L756 72 years, male, stage:Stage IB, alive, 1796 days 969.4
L719 63 years, male, stage:Stage IB, alive, 1615 days 939.3
L858 69 years, female, stage:Stage IIB, dead, 558 days 923.9
L572 58 years, male, stage:Stage IA, alive, 2532 days 872.9
L658 65 years, female, stage:Stage IIB, alive, 2083 days 695.0
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0118340003 Tumor 1.2
CPT0105060003 Tumor 0.9
CPT0014860003 Tumor 0.8
CPT0068800003 Tumor 0.7
CPT0148180004 Tumor 0.7
CPT0063810003 Tumor 0.7
CPT0105270003 Tumor 0.7
CPT0118620003 Tumor 0.7
CPT0069360003 Tumor 0.6
CPT0098130003 Tumor 0.6
CPT0106110003 Tumor 0.6
CPT0113210003 Tumor 0.5
CPT0067940003 Tumor 0.5
CPT0118810003 Tumor 0.5
CPT0083780003 Tumor 0.5
CPT0011710004 Tumor 0.5
CPT0105940003 Tumor 0.5
CPT0067250003 Tumor 0.4
CPT0105600003 Tumor 0.4
CPT0090340003 Tumor 0.4
CPT0008450003 Tumor 0.4
CPT0090170004 Tumor 0.4
CPT0001660013 Tumor 0.4
CPT0089340003 Tumor 0.4
CPT0001800013 Tumor 0.4
CPT0084140003 Tumor 0.4
CPT0117970003 Tumor 0.4
CPT0147480004 Tumor 0.4
CPT0067070003 Tumor 0.4
CPT0147380004 Tumor 0.4
CPT0091860003 Tumor 0.3
CPT0112060003 Tumor 0.3
CPT0001060010 Tumor 0.3
CPT0090860003 Tumor 0.3
CPT0104750003 Tumor 0.3
CPT0092250003 Normal 0.3
CPT0066780003 Tumor 0.3
CPT0147080004 Tumor 0.3
CPT0109740004 Tumor 0.3
CPT0105630003 Tumor 0.3
CPT0114840003 Tumor 0.3
CPT0092240003 Tumor 0.3
CPT0083140003 Normal 0.3
CPT0105550003 Normal 0.3
CPT0125810003 Tumor 0.3
CPT0097580003 Tumor 0.2
CPT0070060003 Tumor 0.2
CPT0090700003 Tumor 0.2
CPT0086750003 Tumor 0.2
CPT0146980004 Tumor 0.2
CPT0063750003 Normal 0.2
CPT0118160003 Tumor 0.2
CPT0015410003 Tumor 0.2
CPT0146700003 Normal 0.2
CPT0118200003 Tumor 0.2
CPT0105710003 Tumor 0.2
CPT0105680003 Normal 0.1
CPT0067450003 Tumor 0.1
CPT0148100003 Normal 0.1
CPT0067110003 Normal 0.1
CPT0067470004 Normal 0.1
CPT0105230003 Tumor 0.1
CPT0086320003 Normal 0.1
CPT0011750003 Normal 0.1
CPT0114690003 Normal 0.1
CPT0148300003 Normal 0.1
CPT0109850003 Normal 0.1
CPT0069700003 Tumor 0.1
CPT0105610003 Normal 0.1
CPT0069520003 Tumor 0.1
CPT0001390003 Normal 0.1
CPT0090200003 Normal 0.1
CPT0146780004 Tumor 0.1
CPT0113220003 Normal 0.1
CPT0147500003 Normal 0.1
CPT0105740003 Normal 0.1
CPT0001590003 Normal 0.0
CPT0086770003 Normal 0.0
CPT0063730003 Tumor 0.0
CPT0102450003 Tumor 0.0
CPT0092530003 Tumor 0.0
CPT0091240003 Tumor 0.0
CPT0105510003 Tumor 0.0
CPT0104760003 Normal 0.0
CPT0148000003 Normal 0.0
CPT0084170003 Normal 0.0
CPT0023310003 Tumor 0.0
CPT0001960003 Tumor 0.0
CPT0147900003 Normal 0.0
CPT0148200003 Normal 0.0
CPT0066810003 Normal 0.0
CPT0000920017 Tumor 0.0
CPT0109760003 Normal 0.0
CPT0070080003 Normal 0.0
CPT0066930003 Normal 0.0
CPT0110860004 Tumor 0.0
CPT0105330003 Tumor 0.0
CPT0001970003 Normal 0.0
CPT0063840003 Normal 0.0
CPT0062810003 Normal 0.0
CPT0066890003 Tumor 0.0
CPT0114660004 Tumor 0.0
CPT0147000003 Normal 0.0
CPT0001070003 Normal 0.0
CPT0114010003 Normal 0.0
CPT0013880003 Tumor 0.0
CPT0090900004 Normal 0.0
CPT0090720003 Normal 0.0
CPT0051690004 Tumor 0.0
CPT0068100003 Tumor 0.0
CPT0089360003 Normal 0.0
CPT0055100004 Tumor 0.0
CPT0097600003 Normal 0.0
CPT0008410003 Tumor -0.1
CPT0000930003 Normal -0.1
CPT0105010004 Normal -0.1
CPT0104650003 Normal -0.1
CPT0067290003 Normal -0.1
CPT0083100003 Tumor -0.1
CPT0105370004 Normal -0.1
CPT0013630003 Normal -0.1
CPT0118570003 Tumor -0.1
CPT0001380003 Tumor -0.1
CPT0079830003 Tumor -0.1
CPT0147100003 Normal -0.1
CPT0014930003 Normal -0.1
CPT0091260003 Normal -0.1
CPT0104630003 Tumor -0.1
CPT0068830003 Normal -0.1
CPT0011930003 Normal -0.1
CPT0069550003 Normal -0.1
CPT0090370003 Normal -0.1
CPT0118360003 Normal -0.1
CPT0067950003 Normal -0.1
CPT0068610003 Tumor -0.1
CPT0112080003 Normal -0.1
CPT0147400003 Normal -0.1
CPT0013600003 Tumor -0.1
CPT0109830004 Tumor -0.1
CPT0147600003 Normal -0.1
CPT0013910003 Normal -0.1
CPT0105190003 Normal -0.1
CPT0109710003 Normal -0.1
CPT0118180003 Normal -0.1
CPT0146800003 Normal -0.2
CPT0082850004 Tumor -0.2
CPT0069370003 Normal -0.2
CPT0109680004 Tumor -0.2
CPT0115070003 Tumor -0.2
CPT0086310003 Tumor -0.2
CPT0118240003 Normal -0.2
CPT0118600003 Normal -0.2
CPT0052940004 Tumor -0.2
CPT0111590003 Normal -0.2
CPT0105250003 Normal -0.2
CPT0091870003 Normal -0.2
CPT0102480003 Normal -0.2
CPT0109700003 Normal -0.2
CPT0105980003 Normal -0.2
CPT0110890003 Normal -0.2
CPT0090570004 Tumor -0.2
CPT0092930003 Tumor -0.2
CPT0023320003 Normal -0.2
CPT0067770003 Normal -0.2
CPT0068130003 Normal -0.2
CPT0110980004 Tumor -0.2
CPT0001690003 Normal -0.2
CPT0082770003 Normal -0.2
CPT0082890003 Normal -0.2
CPT0014260003 Tumor -0.2
CPT0106100003 Normal -0.2
CPT0001810003 Normal -0.2
CPT0052170004 Tumor -0.2
CPT0068650003 Normal -0.2
CPT0090600003 Normal -0.2
CPT0115090003 Normal -0.2
CPT0146880004 Tumor -0.2
CPT0104970003 Tumor -0.3
CPT0147980004 Tumor -0.3
CPT0118650003 Normal -0.3
CPT0118830003 Normal -0.3
CPT0114880003 Normal -0.3
CPT0111480003 Normal -0.3
CPT0146680004 Tumor -0.3
CPT0146600003 Normal -0.3
CPT0109720004 Tumor -0.3
CPT0092940003 Normal -0.3
CPT0015420003 Normal -0.3
CPT0118890003 Normal -0.3
CPT0111300003 Tumor -0.3
CPT0079850003 Normal -0.4
CPT0113990003 Tumor -0.4
CPT0083420003 Normal -0.4
CPT0082740004 Tumor -0.4
CPT0008420003 Normal -0.4
CPT0053040004 Tumor -0.4
CPT0014290003 Normal -0.4
CPT0118010003 Normal -0.4
CPT0067620003 Tumor -0.4
CPT0083810003 Normal -0.5
CPT0125830003 Normal -0.5
CPT0118880003 Tumor -0.5
CPT0083390004 Tumor -0.5
CPT0001580009 Tumor -0.5
CPT0069720003 Normal -0.5
CPT0148280004 Tumor -0.5
CPT0021450003 Tumor -0.7
CPT0147880004 Tumor -0.8
CPT0021490003 Normal -0.9
CPT0011910004 Tumor -1.0
CPT0147580004 Tumor -1.0
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0010050003 Tumor 1.0
CPT0191860003 Tumor 1.0
CPT0204990003 Tumor 0.8
CPT0146380004 Tumor 0.8
CPT0091820003 Tumor 0.8
CPT0197210003 Tumor 0.8
CPT0197740003 Tumor 0.8
CPT0208770003 Tumor 0.7
CPT0245830003 Tumor 0.7
CPT0063430003 Tumor 0.7
CPT0197090003 Tumor 0.6
CPT0117720003 Tumor 0.6
CPT0238110004 Tumor 0.6
CPT0202020008 Tumor 0.6
CPT0086260003 Tumor 0.5
CPT0245780003 Tumor 0.5
CPT0104930003 Tumor 0.5
CPT0104360003 Tumor 0.5
CPT0126740003 Tumor 0.4
CPT0227400003 Tumor 0.4
CPT0218280003 Tumor 0.4
CPT0195510003 Tumor 0.4
CPT0237060004 Tumor 0.4
CPT0102790003 Tumor 0.4
CPT0147680004 Tumor 0.4
CPT0079050003 Tumor 0.4
CPT0197150003 Tumor 0.4
CPT0237410004 Tumor 0.3
CPT0223820003 Normal 0.3
CPT0083980003 Tumor 0.3
CPT0175560003 Tumor 0.3
CPT0091050003 Tumor 0.3
CPT0068280003 Tumor 0.3
CPT0130030003 Tumor 0.3
CPT0202530004 Tumor 0.3
CPT0010060003 Normal 0.3
CPT0205000003 Normal 0.3
CPT0079100003 Tumor 0.3
CPT0175260003 Tumor 0.3
CPT0186130003 Tumor 0.3
CPT0236420003 Tumor 0.3
CPT0245790003 Normal 0.3
CPT0136660003 Normal 0.2
CPT0115830003 Tumor 0.2
CPT0221200003 Tumor 0.2
CPT0112600003 Normal 0.2
CPT0146480004 Tumor 0.2
CPT0218310003 Normal 0.2
CPT0063480003 Tumor 0.2
CPT0175410003 Normal 0.2
CPT0146400003 Normal 0.2
CPT0186210003 Normal 0.2
CPT0126670003 Tumor 0.2
CPT0115860003 Normal 0.2
CPT0202720003 Tumor 0.2
CPT0023470003 Tumor 0.2
CPT0183250004 Tumor 0.2
CPT0197480003 Tumor 0.2
CPT0126830003 Normal 0.2
CPT0209490003 Tumor 0.2
CPT0237760003 Tumor 0.2
CPT0232670003 Tumor 0.2
CPT0237690004 Tumor 0.1
CPT0237080003 Normal 0.1
CPT0112650003 Tumor 0.1
CPT0221660003 Normal 0.1
CPT0237710003 Normal 0.1
CPT0237550004 Tumor 0.1
CPT0105420003 Tumor 0.1
CPT0104380003 Normal 0.1
CPT0233600003 Tumor 0.1
CPT0136640003 Tumor 0.1
CPT0237200004 Tumor 0.1
CPT0187370003 Tumor 0.1
CPT0001030003 Normal 0.1
CPT0175390003 Tumor 0.1
CPT0001020003 Tumor 0.0
CPT0204800003 Tumor 0.0
CPT0209040003 Normal 0.0
CPT0126810003 Tumor 0.0
CPT0007760003 Normal 0.0
CPT0111000004 Normal 0.0
CPT0007740003 Tumor 0.0
CPT0102840003 Normal 0.0
CPT0023500003 Normal 0.0
CPT0128900003 Normal 0.0
CPT0098800003 Normal 0.0
CPT0234930004 Tumor 0.0
CPT0237210003 Normal 0.0
CPT0112660003 Normal 0.0
CPT0234580003 Normal 0.0
CPT0111150004 Tumor 0.0
CPT0202350004 Tumor 0.0
CPT0237780003 Normal 0.0
CPT0236430003 Normal 0.0
CPT0197380003 Normal 0.0
CPT0196810003 Tumor 0.0
CPT0202740003 Normal 0.0
CPT0175270003 Normal 0.0
CPT0208780003 Normal 0.0
CPT0197860003 Normal 0.0
CPT0130440004 Normal 0.0
CPT0202170003 Tumor 0.0
CPT0221220003 Normal 0.0
CPT0191930003 Normal 0.0
CPT0128890003 Tumor 0.0
CPT0147700003 Normal 0.0
CPT0186180003 Tumor 0.0
CPT0191710003 Tumor -0.1
CPT0225470003 Normal -0.1
CPT0227420003 Normal -0.1
CPT0222740003 Normal -0.1
CPT0126470003 Normal -0.1
CPT0087190003 Tumor -0.1
CPT0126390003 Tumor -0.1
CPT0105430003 Normal -0.1
CPT0192540004 Tumor -0.1
CPT0175120003 Tumor -0.1
CPT0108600003 Normal -0.1
CPT0079110003 Normal -0.1
CPT0223790003 Tumor -0.1
CPT0233640003 Normal -0.1
CPT0204600003 Tumor -0.1
CPT0087210003 Normal -0.1
CPT0079060003 Normal -0.1
CPT0063440003 Normal -0.1
CPT0126760003 Normal -0.1
CPT0126450003 Tumor -0.1
CPT0234790003 Tumor -0.1
CPT0202220004 Normal -0.1
CPT0146500003 Normal -0.1
CPT0108560003 Tumor -0.1
CPT0090440003 Tumor -0.1
CPT0112540003 Tumor -0.1
CPT0112580003 Tumor -0.1
CPT0183270003 Normal -0.1
CPT0219360003 Tumor -0.1
CPT0202040003 Normal -0.1
CPT0130270003 Tumor -0.1
CPT0191750003 Normal -0.1
CPT0245840003 Normal -0.1
CPT0202400004 Normal -0.1
CPT0237570003 Normal -0.1
CPT0112720003 Tumor -0.2
CPT0130310003 Normal -0.2
CPT0130410003 Tumor -0.2
CPT0245880003 Tumor -0.2
CPT0192590004 Normal -0.2
CPT0233120003 Tumor -0.2
CPT0064040003 Tumor -0.2
CPT0190550003 Tumor -0.2
CPT0112730003 Normal -0.2
CPT0089880003 Tumor -0.2
CPT0147180004 Tumor -0.2
CPT0126530003 Tumor -0.2
CPT0217420003 Tumor -0.2
CPT0241210003 Normal -0.2
CPT0187380003 Normal -0.2
CPT0219390003 Normal -0.2
CPT0237970004 Tumor -0.2
CPT0175160003 Normal -0.2
CPT0234820003 Normal -0.2
CPT0086270003 Normal -0.2
CPT0091610003 Tumor -0.3
CPT0232690003 Normal -0.3
CPT0233160003 Normal -0.3
CPT0195520003 Normal -0.3
CPT0104950003 Normal -0.3
CPT0091620003 Normal -0.3
CPT0238130003 Normal -0.3
CPT0209510003 Normal -0.3
CPT0207210003 Tumor -0.3
CPT0204660003 Normal -0.3
CPT0112550003 Normal -0.3
CPT0217490003 Normal -0.3
CPT0063500003 Normal -0.3
CPT0197170003 Normal -0.3
CPT0225380003 Tumor -0.3
CPT0197520003 Normal -0.3
CPT0101130003 Tumor -0.3
CPT0237430003 Normal -0.3
CPT0098770003 Tumor -0.3
CPT0069890003 Tumor -0.3
CPT0221650003 Tumor -0.3
CPT0233320003 Tumor -0.4
CPT0091090003 Normal -0.4
CPT0123370003 Normal -0.4
CPT0186140003 Normal -0.4
CPT0209020004 Tumor -0.4
CPT0068320003 Normal -0.4
CPT0204820003 Normal -0.4
CPT0126400003 Normal -0.4
CPT0207250003 Normal -0.4
CPT0196820003 Normal -0.4
CPT0241170003 Tumor -0.5
CPT0130070003 Normal -0.5
CPT0147200003 Normal -0.5
CPT0234560003 Tumor -0.5
CPT0069900003 Normal -0.5
CPT0117770003 Normal -0.5
CPT0197100003 Normal -0.6
CPT0227070003 Normal -0.6
CPT0245890003 Normal -0.6
CPT0123350003 Tumor -0.6
CPT0083990003 Normal -0.6
CPT0237990003 Normal -0.6
CPT0202580004 Normal -0.7
CPT0064050003 Normal -0.7
CPT0234950004 Normal -0.7
CPT0233330003 Normal -0.7
CPT0222730003 Tumor -0.8
CPT0227020003 Tumor -0.9
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA031153

Antibody CAB004027
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS
Neoplasm, malignant, NOS

Contact

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