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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:485.1 nTPM
HPA Brain:390.0 nTPM
GTEx:485.1 nTPM
FANTOM5:450.5 Scaled Tags Per Million
Pig:180.7 nTPM
Mouse:218.8 nTPM
Allen mouse:22.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043640Antibody HPA046280
Glial cells Not detectedLow
Neuronal cells Not detectedLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

390.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 347.1
2289 Male, age 61, right hemisphere 471.7
2481 Female, age 94, left hemisphere 443.4
1854 Male, age 80, left hemisphere 421.4
1857 Female, age 85, left hemisphere 393.2
2290 Female, age 72, unknown 340.0
1781 Male, age 74, unknown 270.9
2288 Male, age 75, left hemisphere 227.5
2846 Female, age 79, unknown 209.0
Globus pallidus, externus
nTPM: 390.0
2646 Male, age 61, right hemisphere 690.1
1996 Male, age 80, right hemisphere 464.6
2772 Female, age 79, unknown 378.4
2567 Female, age 72, unknown 240.4
2395 Male, age 75, both hemispheres 176.6
Globus pallidus, internus
nTPM: 339.7
2483 Female, age 94, right hemisphere 459.8
1818 Male, age 74, unknown 366.8
2037 Male, age 80, right hemisphere 363.3
2778 Female, age 91, both hemispheres 326.6
2111 Female, age 85, right hemisphere 309.6
2287 Male, age 75, right hemisphere 295.0
2566 Female, age 72, unknown 256.9
Nucleus accumbens
nTPM: 331.1
1806 Female, age 85, left hemisphere 494.5
2824 Male, age 61, right hemisphere 375.2
2286 Male, age 75, left hemisphere 353.3
2732 Male, age 80, right hemisphere 339.1
2698 Female, age 72, unknown 299.7
1856 Female, age 91, right hemisphere 282.6
1783 Male, age 74, unknown 259.2
2391 Female, age 94, left hemisphere 244.8
Nucleus basalis of Meynert
nTPM: 354.4
2569 Male, age 61, both hemispheres 730.0
2393 Male, age 80, right hemisphere 245.7
2484 Female, age 94, left hemisphere 233.2
2821 Male, age 75, both hemispheres 208.7
Nucleus of the diagonal band
nTPM: 243.8
1979 Male, age 74, unknown 326.9
1812 Female, age 91, both hemispheres 265.8
2195 Female, age 85, both hemispheres 221.1
2775 Male, age 80, right hemisphere 202.8
2029 Male, age 61, right hemisphere 202.6
Putamen
nTPM: 259.4
2482 Female, age 94, left hemisphere 413.2
2647 Male, age 75, left hemisphere 294.9
1838 Male, age 80, right hemisphere 281.8
1937 Female, age 91, right hemisphere 263.2
2489 Female, age 72, unknown 237.1
2466 Female, age 79, unknown 177.8
1829 Male, age 74, unknown 147.8
Septal nuclei
nTPM: 260.4
2199 Male, age 80, right hemisphere 337.7
2059 Female, age 85, both hemispheres 314.8
1960 Male, age 74, unknown 307.6
2394 Male, age 61, left hemisphere 253.9
2031 Female, age 72, unknown 219.5
2009 Female, age 91, both hemispheres 205.7
2629 Female, age 94, right hemisphere 183.7
Stria terminalis, bed nucleus
nTPM: 230.0
2201 Male, age 74, unknown 293.0
2486 Female, age 94, both hemispheres 205.6
1974 Female, age 91, both hemispheres 191.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

485.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 411.7
Samples: 246

Max nTPM: 1659.6
Min nTPM: 48.3
Std nTPM: 234.9
Median nTPM: 354.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1659.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1479.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1143.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1096.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1014.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 961.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 955.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 935.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 925.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 918.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 913.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 870.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 844.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 828.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 820.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 818.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 804.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 799.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 774.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 768.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 761.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 761.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 744.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 732.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 728.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 718.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 708.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 707.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 701.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 694.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 677.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 668.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 649.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 649.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 649.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 648.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 641.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 639.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 635.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 609.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 608.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 605.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 604.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 602.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 583.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 575.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 574.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 564.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 562.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 559.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 555.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 555.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 545.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 537.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 537.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 535.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 532.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 531.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 525.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 523.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 523.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 522.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 520.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 514.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 513.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 511.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 505.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 497.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 495.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 492.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 489.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 486.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 481.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 481.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 478.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 472.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 470.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 468.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 466.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 466.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 462.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 453.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 450.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 447.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 444.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 439.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 435.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 434.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 434.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 427.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 424.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 422.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 414.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 414.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 412.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 410.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 408.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 404.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 401.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 400.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 397.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 397.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 395.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 395.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 390.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 390.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 389.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 386.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 378.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 377.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 376.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 374.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 371.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 371.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 369.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 366.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 365.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 363.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 362.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 360.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 360.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 356.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 354.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 354.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 353.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 353.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 352.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 350.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 349.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 343.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 343.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 337.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 336.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 336.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 336.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 333.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 332.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 329.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 326.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 325.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 325.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 325.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 323.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 322.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 322.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 322.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 321.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 319.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 319.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 317.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 315.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 315.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 311.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 309.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 307.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 306.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 306.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 305.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 304.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 304.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 303.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 302.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 301.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 295.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 295.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 291.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 289.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 288.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 279.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 279.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 276.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 275.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 275.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 274.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 273.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 271.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 269.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 266.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 265.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 265.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 262.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 261.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 255.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 250.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 248.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 246.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 245.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 242.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 239.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 237.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 235.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 233.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 232.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 232.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 231.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 231.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 231.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 229.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 226.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 225.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 225.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 222.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 217.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 215.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 213.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 211.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 210.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 209.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 207.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 205.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 204.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 203.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 199.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 199.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 197.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 196.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 194.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 192.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 189.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 184.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 183.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 183.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 181.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 181.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 179.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 166.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 165.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 161.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 152.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 142.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 138.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 137.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 131.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 128.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 124.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 115.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 111.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 106.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 103.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 85.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 84.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 83.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 80.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 69.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 60.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 48.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 485.1
Samples: 246

Max nTPM: 1833.4
Min nTPM: 62.7
Std nTPM: 279.7
Median nTPM: 394.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1833.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1588.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1559.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1531.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1264.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1235.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1192.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1185.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1179.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 1148.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1140.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1058.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1039.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1007.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 989.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 983.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 980.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 956.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 926.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 908.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 906.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 896.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 890.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 884.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 875.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 837.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 806.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 790.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 784.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 783.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 774.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 770.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 761.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 758.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 752.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 744.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 739.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 728.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 728.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 723.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 712.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 709.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 704.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 702.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 700.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 696.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 693.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 686.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 678.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 668.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 643.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 639.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 638.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 634.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 633.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 625.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 623.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 619.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 613.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 607.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 606.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 599.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 592.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 591.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 583.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 572.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 565.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 563.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 562.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 561.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 557.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 556.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 555.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 552.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 551.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 547.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 542.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 540.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 536.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 532.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 529.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 529.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 522.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 521.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 518.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 516.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 513.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 502.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 488.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 480.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 480.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 475.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 473.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 471.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 469.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 467.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 466.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 466.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 464.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 462.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 461.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 457.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 456.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 453.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 448.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 443.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 440.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 437.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 432.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 431.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 431.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 429.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 422.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 415.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 415.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 413.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 410.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 406.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 402.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 402.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 397.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 396.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 394.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 393.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 390.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 384.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 383.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 382.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 378.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 377.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 376.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 375.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 375.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 373.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 373.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 371.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 371.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 370.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 370.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 367.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 367.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 366.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 364.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 363.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 362.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 357.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 356.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 353.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 352.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 351.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 345.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 343.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 343.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 341.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 339.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 339.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 338.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 336.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 335.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 335.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 333.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 331.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 330.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 330.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 327.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 326.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 325.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 324.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 323.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 321.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 320.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 319.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 316.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 312.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 312.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 311.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 309.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 308.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 306.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 303.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 303.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 302.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 302.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 301.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 300.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 298.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 295.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 295.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 294.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 294.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 293.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 291.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 289.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 289.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 288.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 286.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 286.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 279.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 278.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 277.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 273.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 264.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 263.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 258.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 258.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 255.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 255.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 253.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 251.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 249.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 247.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 246.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 243.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 242.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 241.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 239.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 237.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 235.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 231.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 227.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 225.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 224.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 223.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 218.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 218.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 217.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 216.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 215.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 215.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 211.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 210.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 209.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 209.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 200.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 198.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 193.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 193.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 191.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 191.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 186.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 182.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 149.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 142.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 136.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 80.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 62.7
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Brain - Putamen (basal ganglia)
Average nTPM: 413.6
Samples: 205

Max nTPM: 1347.4
Min nTPM: 51.5
Std nTPM: 215.7
Median nTPM: 374.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1347.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 996.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 950.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 946.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 936.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 925.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 888.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 872.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 866.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 862.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 857.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 856.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 843.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 838.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 812.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 804.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 771.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 769.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 745.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 727.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 722.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 717.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 690.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 675.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 668.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 656.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 641.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 639.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 639.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 638.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 615.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 609.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 608.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 604.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 598.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 594.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 588.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 583.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 582.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 581.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 579.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 571.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 568.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 564.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 560.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 549.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 548.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 541.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 539.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 538.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 536.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 532.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 532.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 528.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 522.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 518.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 518.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 506.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 501.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 500.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 499.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 496.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 495.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 488.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 479.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 476.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 476.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 469.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 468.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 459.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 459.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 458.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 457.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 453.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 451.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 449.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 449.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 438.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 438.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 434.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 427.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 426.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 426.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 425.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 417.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 414.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 414.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 411.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 401.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 400.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 397.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 394.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 393.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 391.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 389.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 389.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 384.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 384.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 379.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 379.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 378.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 376.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 374.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 372.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 365.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 364.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 364.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 362.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 360.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 359.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 357.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 354.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 352.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 352.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 352.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 350.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 347.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 346.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 345.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 339.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 337.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 330.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 328.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 319.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 314.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 311.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 310.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 309.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 308.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 307.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 306.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 305.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 305.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 301.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 300.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 300.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 300.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 297.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 290.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 290.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 288.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 286.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 284.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 282.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 278.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 274.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 273.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 270.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 268.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 268.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 262.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 261.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 261.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 255.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 244.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 242.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 241.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 241.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 240.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 240.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 239.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 239.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 237.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 234.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 233.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 224.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 218.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 216.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 213.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 213.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 211.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 209.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 204.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 204.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 203.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 203.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 202.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 200.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 197.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 194.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 193.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 192.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 191.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 188.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 186.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 184.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 181.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 178.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 171.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 159.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 156.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 151.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 143.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 142.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 135.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 121.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 111.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 108.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 107.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 105.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 97.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 78.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 77.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 67.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 51.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

450.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 450.5
FF:10164-103B2 76 years, female 450.5
Nucleus accumbens
Scaled Tags Per Million: 255.5
FF:10037-101F1 23-56 years, mixed 255.5
Putamen
Scaled Tags Per Million: 354.0
FF:10176-103C5 60 years, female 354.0
Globus pallidus
Scaled Tags Per Million: 258.9
FF:10175-103C4 60 years, female 285.6
FF:10161-103A8 76 years, female 232.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

180.7
Pig sample Sample description nTPM
Caudate
nTPM: 166.2
Samples: 4

Max nTPM: 251.7
Min nTPM: 119.0
Sample A Female 119.0
Sample B Female 168.6
Sample C Male 251.7
Sample D Male 125.5
Putamen
nTPM: 127.9
Samples: 4

Max nTPM: 173.1
Min nTPM: 95.2
Sample A Female 126.8
Sample B Female 95.2
Sample C Male 173.1
Sample D Male 116.6
Septum
nTPM: 180.7
Samples: 4

Max nTPM: 300.9
Min nTPM: 137.4
Sample A Female 137.4
Sample B Female 142.2
Sample C Male 300.9
Sample D Male 142.1
Ventral pallidum
nTPM: 160.7
Samples: 4

Max nTPM: 294.0
Min nTPM: 99.9
Sample A Female 99.9
Sample B Female 135.0
Sample C Male 294.0
Sample D Male 113.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

218.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 191.7
Samples: 4

Max nTPM: 230.4
Min nTPM: 166.1
Sample A Male 166.1
Sample B Male 201.4
Sample C Female 169.0
Sample D Female 230.4
Septum
nTPM: 218.8
Samples: 4

Max nTPM: 230.2
Min nTPM: 199.6
Sample A Male 199.6
Sample B Male 230.2
Sample C Female 226.0
Sample D Female 219.2
Ventral forebrain
nTPM: 182.4
Samples: 4

Max nTPM: 219.0
Min nTPM: 166.6
Sample A Male 166.6
Sample B Male 173.1
Sample C Female 219.0
Sample D Female 170.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

22.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 20.2
74819689 Antisense, RP_060315_02_H05, Mouse strain C57BL/6J (56 days, male) 21.2
69838608 Antisense, RP_050310_02_C05, Mouse strain C57BL/6J (56 days, male) 19.7
69854163 Antisense, RP_050324_04_C01, Mouse strain C57BL/6J (56 days, male) 19.5
Pallidum
Expression energy: 22.0
74819689 Antisense, RP_060315_02_H05, Mouse strain C57BL/6J (56 days, male) 24.3
69838608 Antisense, RP_050310_02_C05, Mouse strain C57BL/6J (56 days, male) 21.6
69854163 Antisense, RP_050324_04_C01, Mouse strain C57BL/6J (56 days, male) 20.1

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