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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:649.3 nTPM
FANTOM5:799.0 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

649.3
Sample id Sample description nTPM
Area postrema
nTPM: 565.7
2799 Male, age 61, both hemispheres 655.7
2306 Male, age 80, both hemispheres 602.7
2054 Male, age 76, both hemispheres 438.8
Dorsal medullary reticular nucleus
nTPM: 455.3
2373 Male, age 61, both hemispheres 532.7
2040 Female, age 85, both hemispheres 476.9
2088 Male, age 76, both hemispheres 356.2
Dorsal motor vagal complex
nTPM: 546.4
2797 Male, age 61, both hemispheres 870.6
2807 Female, age 85, both hemispheres 663.5
2813 Female, age 72, unknown 601.0
2643 Male, age 74, both hemispheres 538.6
2133 Female, age 91, both hemispheres 492.9
2000 Male, age 74, unknown 429.3
2185 Male, age 76, both hemispheres 397.1
2844 Male, age 55, unknown 378.3
Gigantocellular reticular nuclei, medullary
nTPM: 483.0
2314 Male, age 61, both hemispheres 646.1
2387 Female, age 91, both hemispheres 515.5
2310 Male, age 80, both hemispheres 478.5
1876 Female, age 85, both hemispheres 475.0
2022 Male, age 76, right hemisphere 418.9
2462 Male, age 74, both hemispheres 363.9
Gigantocellular reticular nuclei, pars
nTPM: 493.5
2336 Male, age 61, both hemispheres 533.6
2706 Male, age 80, both hemispheres 523.2
2330 Male, age 80, both hemispheres 499.8
2084 Female, age 85, both hemispheres 493.5
2168 Male, age 76, both hemispheres 417.2
Inferior olive
nTPM: 587.8
2628 Female, age 91, both hemispheres 718.4
2178 Male, age 61, both hemispheres 582.2
2563 Male, age 74, both hemispheres 560.1
2379 Male, age 80, both hemispheres 540.9
2085 Female, age 85, both hemispheres 537.5
Lateral medullary reticular nucleus
nTPM: 563.0
2374 Male, age 61, both hemispheres 668.4
2804 Female, age 91, both hemispheres 597.7
2190 Female, age 85, both hemispheres 587.4
2852 Male, age 80, both hemispheres 567.4
2305 Male, age 74, both hemispheres 545.8
2044 Male, age 76, both hemispheres 411.2
Medial olivary nucleus
nTPM: 649.3
2851 Male, age 80, both hemispheres 771.7
1943 Male, age 61, both hemispheres 692.8
1962 Male, age 76, both hemispheres 583.3
2138 Female, age 91, both hemispheres 549.2
Medial vestibular nucleus
nTPM: 542.8
2624 Male, age 61, both hemispheres 708.9
2803 Female, age 91, both hemispheres 672.9
2801 Male, age 74, both hemispheres 586.9
2093 Male, age 80, both hemispheres 464.6
2743 Female, age 85, both hemispheres 424.8
2134 Male, age 76, both hemispheres 398.7
Motor hypoglossal nucleus
nTPM: 479.5
2132 Female, age 85, both hemispheres 581.2
2182 Male, age 80, both hemispheres 541.6
2461 Male, age 61, both hemispheres 505.2
2125 Female, age 91, both hemispheres 455.3
2277 Male, age 76, both hemispheres 314.0
Nucleus ambiguus
nTPM: 411.1
2071 Male, age 76, both hemispheres 551.2
2096 Female, age 85, both hemispheres 271.0
Nucleus cuneatus
nTPM: 493.8
2808 Female, age 85, both hemispheres 684.3
2805 Female, age 91, both hemispheres 572.3
2380 Male, age 80, both hemispheres 536.7
2381 Male, age 80, both hemispheres 532.3
2376 Male, age 61, both hemispheres 502.8
2562 Male, age 61, both hemispheres 482.5
2564 Male, age 74, both hemispheres 461.6
2100 Male, age 76, both hemispheres 340.9
2131 Male, age 76, both hemispheres 331.0
Nucleus gracilis
nTPM: 609.3
2627 Male, age 74, both hemispheres 676.1
2382 Male, age 80, both hemispheres 629.8
2299 Female, age 85, both hemispheres 521.9
Nucleus raphe obscurus
nTPM: 631.3
2845 Female, age 85, midline 748.1
2800 Male, age 61, midline 607.9
2142 Male, age 76, midline 538.0
Nucleus raphe pallidus
nTPM: 607.3
1924 Male, age 61, midline 675.4
2183 Male, age 80, midline 578.4
2145 Male, age 76, midline 568.0
Nucleus tractus solitarii
nTPM: 436.2
2191 Female, age 85, both hemispheres 535.5
2144 Female, age 91, right hemisphere 528.0
2656 Male, age 76, both hemispheres 349.5
2307 Male, age 80, both hemispheres 331.7
Parvicellular reticular nuclei
nTPM: 454.4
2095 Male, age 76, both hemispheres 491.0
2119 Male, age 80, both hemispheres 489.3
2558 Male, age 74, both hemispheres 382.9
Parvicellular reticular nuclei, medullary
nTPM: 484.4
2181 Male, age 80, left hemisphere 513.7
2189 Female, age 91, both hemispheres 490.4
2091 Female, age 85, both hemispheres 449.2
Peritrigeminal nucleus
nTPM: 516.0
2067 Female, age 85, both hemispheres 574.4
2136 Male, age 76, both hemispheres 504.7
2179 Male, age 61, both hemispheres 469.1
Prepositus hypoglossal nucleus
nTPM: 541.3
2855 Female, age 85, right hemisphere 612.9
2086 Male, age 80, both hemispheres 469.7
Spinal trigeminal nucleus, caudal
nTPM: 476.0
2312 Male, age 61, both hemispheres 554.5
2390 Female, age 91, both hemispheres 512.4
2642 Male, age 74, both hemispheres 497.8
2308 Male, age 80, both hemispheres 476.4
2447 Male, age 76, both hemispheres 338.8
Spinal trigeminal nucleus, interpolar
nTPM: 509.2
2625 Male, age 61, both hemispheres 621.3
2389 Female, age 91, both hemispheres 542.8
2033 Male, age 80, both hemispheres 485.2
2386 Female, age 85, both hemispheres 459.5
2066 Male, age 76, right hemisphere 437.0
Spinal vestibular nucleus
nTPM: 567.7
2796 Male, age 61, both hemispheres 756.9
2806 Female, age 85, both hemispheres 676.9
2384 Male, age 74, both hemispheres 552.5
2780 Male, age 80, both hemispheres 498.8
2186 Female, age 91, both hemispheres 477.8
2748 Male, age 76, both hemispheres 443.2
Superior vestibular nucleus
nTPM: 532.1
2383 Male, age 74, both hemispheres 600.8
2015 Male, age 80, both hemispheres 567.8
2061 Male, age 76, both hemispheres 427.8
Ventral medullary reticular nucleus
nTPM: 463.3
2372 Male, age 61, both hemispheres 553.5
2060 Male, age 76, both hemispheres 373.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 531.5
2118 Male, age 80, both hemispheres 587.1
2180 Male, age 61, both hemispheres 565.4
2302 Female, age 91, both hemispheres 547.0
2741 Female, age 85, both hemispheres 487.1
1986 Male, age 76, both hemispheres 470.8

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

799.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 799.0
FF:10155-103A2 76 years, female 934.4
FF:10174-103C3 60 years, female 913.8
FF:10038-101F2 18-64 years, mixed 548.8

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