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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
622.5
nTPM
FANTOM5:
833.8
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
622.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 590.7
2301
Female, age 85, both hemispheres
700.6
2188
Female, age 91, both hemispheres
663.2
2090
Male, age 80, both hemispheres
561.7
1984
Male, age 76, both hemispheres
437.5
Dorsal cochlear nucleus nTPM: 492.4
2187
Female, age 91, both hemispheres
594.7
2802
Male, age 74, right hemisphere
537.8
2378
Male, age 80, both hemispheres
500.6
2370
Male, age 61, both hemispheres
482.1
2058
Male, age 76, both hemispheres
346.6
Dorsal tegmental nucleus nTPM: 552.2
2358
Male, age 61, both hemispheres
650.9
2083
Male, age 80, both hemispheres
558.6
2326
Male, age 74, both hemispheres
542.8
1936
Male, age 76, left hemisphere
456.3
Dorsolateral tegmental area nTPM: 558.2
2337
Male, age 61, both hemispheres
788.0
2654
Male, age 80, both hemispheres
596.8
2751
Female, age 85, both hemispheres
507.1
2141
Male, age 76, both hemispheres
469.3
2360
Male, age 74, both hemispheres
429.5
Kolliker-Fuse nucleus nTPM: 578.6
2793
Female, age 91, left hemisphere
680.9
2315
Male, age 76, right hemisphere
559.8
2163
Male, age 80, both hemispheres
494.9
Lateral lemniscal nuclei nTPM: 421.8
2169
Male, age 76, both hemispheres
515.9
2320
Female, age 91, left hemisphere
446.1
2453
Male, age 74, right hemisphere
413.5
2746
Female, age 85, left hemisphere
396.4
2036
Male, age 80, both hemispheres
337.1
Lateral parabrachial nucleus nTPM: 564.8
2792
Male, age 76, both hemispheres
739.2
2013
Male, age 80, both hemispheres
579.3
2139
Female, age 85, right hemisphere
503.3
2790
Male, age 61, both hemispheres
437.4
Lateral vestibular nucleus nTPM: 527.8
2311
Male, age 80, both hemispheres
624.2
2184
Male, age 76, both hemispheres
431.5
Locus coeruleus nTPM: 454.5
2720
Male, age 74, both hemispheres
656.8
2788
Male, age 74, unknown
482.6
2162
Male, age 80, both hemispheres
467.7
2123
Female, age 91, both hemispheres
439.7
2014
Male, age 55, unknown
399.8
2317
Female, age 72, unknown
384.5
1980
Male, age 76, both hemispheres
350.6
Medial parabrachial nucleus nTPM: 532.6
2854
Male, age 80, both hemispheres
687.5
2170
Female, age 91, both hemispheres
623.9
2786
Male, age 76, both hemispheres
481.0
2156
Male, age 61, both hemispheres
458.0
2463
Female, age 85, right hemisphere
412.8
Medial periolivary nuclei nTPM: 453.6
2458
Female, age 91, both hemispheres
502.4
2063
Male, age 76, both hemispheres
471.7
2081
Male, age 80, both hemispheres
448.7
2791
Male, age 74, right hemisphere
427.0
2171
Female, age 85, both hemispheres
418.1
Motor facial nucleus nTPM: 489.3
2697
Female, age 85, both hemispheres
676.1
2795
Female, age 91, both hemispheres
527.8
2365
Male, age 74, right hemisphere
474.9
2126
Male, age 61, both hemispheres
426.6
2062
Male, age 76, both hemispheres
418.9
2327
Male, age 80, both hemispheres
411.5
Motor trigeminal nucleus nTPM: 476.2
2321
Female, age 91, both hemispheres
531.3
2335
Male, age 61, both hemispheres
508.2
2309
Male, age 76, both hemispheres
474.7
2560
Male, age 74, both hemispheres
444.4
2079
Male, age 80, both hemispheres
422.3
Nuclei of the trapezoid body nTPM: 437.8
1983
Male, age 76, both hemispheres
543.7
2166
Male, age 80, both hemispheres
472.9
2159
Male, age 61, both hemispheres
421.8
2368
Female, age 91, both hemispheres
394.1
2735
Female, age 85, both hemispheres
356.3
Nucleus raphe magnus nTPM: 441.3
2051
Male, age 76, both hemispheres
483.0
2455
Male, age 74, both hemispheres
471.6
2328
Male, age 80, both hemispheres
457.7
2172
Female, age 85, both hemispheres
438.3
2459
Female, age 91, both hemispheres
427.2
2160
Male, age 61, both hemispheres
370.2
Paramedian reticular nucleus nTPM: 502.6
2052
Male, age 76, both hemispheres
579.4
2050
Female, age 85, both hemispheres
523.2
2313
Male, age 61, both hemispheres
518.2
2057
Male, age 80, both hemispheres
389.4
Pedunculopontine tegmental nucleus nTPM: 622.5
2338
Male, age 61, both hemispheres
863.7
2334
Male, age 80, both hemispheres
594.5
1921
Female, age 85, both hemispheres
409.4
Pontine nuclei nTPM: 449.5
2319
Female, age 91, both hemispheres
599.9
1863
Male, age 55, unknown
526.5
2454
Male, age 74, left hemisphere
446.7
2787
Female, age 85, both hemispheres
437.2
2115
Male, age 80, left hemisphere
429.1
1968
Male, age 76, left hemisphere
428.9
2109
Female, age 72, unknown
401.6
2727
Male, age 61, right hemisphere
326.5
Pontine raphe nucleus nTPM: 458.0
2853
Male, age 76, midline
478.4
2122
Female, age 85, midline
437.6
Posteroventral cochlear nucleus nTPM: 566.6
2341
Male, age 80, both hemispheres
749.1
2135
Female, age 91, both hemispheres
668.7
2371
Male, age 61, both hemispheres
545.6
2752
Female, age 85, both hemispheres
453.0
2070
Male, age 76, both hemispheres
416.5
Principal sensory trigeminal nucleus nTPM: 438.9
2367
Female, age 91, left hemisphere
559.5
2324
Male, age 76, both hemispheres
482.9
2158
Male, age 61, both hemispheres
382.7
2008
Male, age 80, left hemisphere
330.4
Reticular pontine nucleus, caudal nTPM: 485.6
2457
Female, age 91, both hemispheres
548.5
2559
Male, age 74, both hemispheres
525.1
2092
Male, age 76, both hemispheres
520.4
2332
Male, age 80, right hemisphere
348.7
Reticular pontine nucleus, oral nTPM: 511.1
2366
Female, age 91, both hemispheres
604.1
2167
Male, age 76, both hemispheres
561.6
1939
Male, age 80, both hemispheres
539.1
2361
Male, age 74, both hemispheres
446.5
2012
Female, age 85, both hemispheres
404.3
Reticulotegmental nucleus nTPM: 511.9
2322
Female, age 91, both hemispheres
570.5
2325
Male, age 76, both hemispheres
506.1
2452
Male, age 74, both hemispheres
487.5
2333
Male, age 80, both hemispheres
483.3
Spinal trigeminal nucleus, oral nTPM: 428.0
2164
Male, age 80, both hemispheres
489.8
1978
Male, age 76, both hemispheres
407.9
2737
Female, age 85, both hemispheres
386.4
Subcoeruleus area nTPM: 485.3
1958
Male, age 80, both hemispheres
532.3
2369
Female, age 85, left hemisphere
514.1
2451
Male, age 74, both hemispheres
501.5
2323
Female, age 91, left hemisphere
475.0
2089
Male, age 76, left hemisphere
403.6
Superior olive nTPM: 474.9
2020
Male, age 76, both hemispheres
542.8
2561
Female, age 91, both hemispheres
519.7
2364
Male, age 74, right hemisphere
449.5
2329
Male, age 80, right hemisphere
440.8
1875
Female, age 85, both hemispheres
421.6
Ventral periolivary nuclei nTPM: 488.8
2023
Male, age 76, both hemispheres
531.0
2794
Female, age 91, left hemisphere
523.1
2165
Male, age 80, both hemispheres
477.2
2130
Female, age 85, both hemispheres
424.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 502.1
2840
Female, age 85, both hemispheres
621.5
2359
Male, age 61, both hemispheres
561.9
1959
Male, age 76, both hemispheres
516.6
2161
Male, age 80, both hemispheres
513.4
2449
Male, age 74, both hemispheres
404.8
2456
Female, age 91, both hemispheres
394.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
