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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:62.1 nTPM
HPA Brain:161.1 nTPM
GTEx:62.1 nTPM
FANTOM5:217.0 Scaled Tags Per Million
Pig:60.9 nTPM
Mouse:117.3 nTPM
Allen mouse:11.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041785Antibody HPA069311Antibody CAB005580
Glial cells LowMediumHigh
Neuronal cells LowMediumHigh







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 112.3
1781 Male, age 74, unknown 141.1
2288 Male, age 75, left hemisphere 128.2
2290 Female, age 72, unknown 117.5
2846 Female, age 79, unknown 112.5
2289 Male, age 61, right hemisphere 109.0
1857 Female, age 85, left hemisphere 108.2
1854 Male, age 80, left hemisphere 101.8
2481 Female, age 94, left hemisphere 80.3
Globus pallidus, externus
nTPM: 116.4
2772 Female, age 79, unknown 133.6
2567 Female, age 72, unknown 126.3
2646 Male, age 61, right hemisphere 124.6
2395 Male, age 75, both hemispheres 99.9
1996 Male, age 80, right hemisphere 97.6
Globus pallidus, internus
nTPM: 106.9
2566 Female, age 72, unknown 119.0
1818 Male, age 74, unknown 117.2
2111 Female, age 85, right hemisphere 117.2
2287 Male, age 75, right hemisphere 116.9
2778 Female, age 91, both hemispheres 106.2
2037 Male, age 80, right hemisphere 93.2
2483 Female, age 94, right hemisphere 78.5
Nucleus accumbens
nTPM: 117.7
1783 Male, age 74, unknown 141.9
1856 Female, age 91, right hemisphere 128.3
2824 Male, age 61, right hemisphere 124.1
2286 Male, age 75, left hemisphere 122.0
1806 Female, age 85, left hemisphere 120.8
2698 Female, age 72, unknown 110.5
2732 Male, age 80, right hemisphere 96.9
2391 Female, age 94, left hemisphere 96.7
Nucleus basalis of Meynert
nTPM: 109.7
2821 Male, age 75, both hemispheres 122.5
2569 Male, age 61, both hemispheres 113.5
2484 Female, age 94, left hemisphere 111.2
2393 Male, age 80, right hemisphere 91.5
Nucleus of the diagonal band
nTPM: 156.9
2029 Male, age 61, right hemisphere 188.9
2775 Male, age 80, right hemisphere 165.3
2195 Female, age 85, both hemispheres 162.5
1812 Female, age 91, both hemispheres 154.5
1979 Male, age 74, unknown 113.3
Putamen
nTPM: 116.0
2647 Male, age 75, left hemisphere 147.0
1937 Female, age 91, right hemisphere 121.4
1829 Male, age 74, unknown 120.5
2466 Female, age 79, unknown 113.0
1838 Male, age 80, right hemisphere 111.4
2489 Female, age 72, unknown 108.1
2482 Female, age 94, left hemisphere 90.5
Septal nuclei
nTPM: 141.0
1960 Male, age 74, unknown 175.3
2629 Female, age 94, right hemisphere 159.4
2031 Female, age 72, unknown 154.6
2059 Female, age 85, both hemispheres 141.6
2009 Female, age 91, both hemispheres 136.0
2394 Male, age 61, left hemisphere 130.5
2199 Male, age 80, right hemisphere 89.7
Stria terminalis, bed nucleus
nTPM: 161.1
1974 Female, age 91, both hemispheres 178.2
2486 Female, age 94, both hemispheres 178.2
2201 Male, age 74, unknown 126.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 53.1
Samples: 246

Max nTPM: 100.6
Min nTPM: 23.4
Std nTPM: 12.8
Median nTPM: 53.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 100.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 78.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 78.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 78.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 77.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 77.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 77.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 76.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 74.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 73.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 73.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 72.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 72.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 72.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 72.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 71.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 71.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 71.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 70.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 70.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 69.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 69.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 69.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 69.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 69.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 68.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 68.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 68.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 68.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 67.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 67.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 67.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 66.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 66.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 66.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 66.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 66.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 66.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 66.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 66.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 66.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 65.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 65.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 65.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 65.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 65.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 64.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 64.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 64.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 63.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 63.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 63.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 63.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 63.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 63.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 63.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 63.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 63.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 63.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 62.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 62.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 62.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 62.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 62.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 62.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 62.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 62.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 61.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 61.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 61.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 61.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 61.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 60.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 60.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 60.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 60.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 60.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 60.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 60.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 60.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 60.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 59.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 59.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 59.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 59.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 59.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 58.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 58.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 58.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 57.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 57.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 57.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 57.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 57.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 57.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 57.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 56.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 56.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 56.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 56.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 56.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 55.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 55.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 55.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 55.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 55.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 55.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 55.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 55.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 55.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 55.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 54.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 54.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 54.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 54.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 54.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 53.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 53.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 53.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 53.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 53.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 53.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 53.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 52.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 52.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 52.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 52.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 52.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 51.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 51.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 51.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 51.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 51.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 51.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 50.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 50.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 50.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 50.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 49.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 49.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 49.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 49.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 49.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 49.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 49.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 49.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 49.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 49.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 49.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 49.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 49.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 48.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 48.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 48.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 48.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 47.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 47.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 47.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 47.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 47.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 47.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 46.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 46.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 46.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 46.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 45.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 45.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 45.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 45.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 45.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 44.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 44.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 44.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 44.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 44.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 43.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 43.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 43.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 43.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 42.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 42.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 42.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 42.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 42.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 42.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 41.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 41.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 41.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 41.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 41.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 40.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 40.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 40.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 39.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 39.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 39.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 39.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 39.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 39.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 39.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 39.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 38.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 38.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 38.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 38.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 38.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 37.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 37.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 37.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 37.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 36.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 36.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 36.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 35.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 35.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 35.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 35.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 35.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 35.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 35.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 34.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 34.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 33.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 32.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 32.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 31.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 31.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 30.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 30.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 30.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 30.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 30.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 28.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 28.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 28.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 27.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 27.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 24.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 23.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 62.1
Samples: 246

Max nTPM: 101.3
Min nTPM: 20.2
Std nTPM: 14.4
Median nTPM: 64.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 101.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 96.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 93.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 92.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 88.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 88.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 88.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 88.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 86.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 86.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 85.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 85.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 85.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 83.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 81.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 81.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 81.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 81.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 80.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 80.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 80.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 79.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 79.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 79.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 79.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 79.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 79.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 78.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 78.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 77.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 77.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 77.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 77.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 77.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 77.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 76.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 76.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 76.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 76.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 75.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 75.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 74.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 74.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 74.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 73.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 73.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 73.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 73.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 73.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 73.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 73.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 73.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 73.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 73.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 73.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 73.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 72.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 72.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 72.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 72.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 72.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 72.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 71.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 71.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 71.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 71.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 71.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 71.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 71.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 71.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 71.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 71.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 71.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 70.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 70.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 70.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 70.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 70.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 70.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 70.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 70.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 69.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 69.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 69.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 69.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 69.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 69.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 69.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 69.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 69.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 68.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 68.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 68.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 68.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 68.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 68.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 68.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 68.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 68.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 67.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 67.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 67.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 67.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 67.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 66.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 66.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 66.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 66.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 66.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 66.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 66.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 66.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 65.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 65.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 65.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 65.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 65.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 65.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 65.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 65.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 64.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 64.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 64.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 64.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 64.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 64.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 64.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 64.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 64.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 63.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 63.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 63.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 63.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 63.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 62.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 62.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 62.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 62.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 61.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 61.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 61.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 60.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 60.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 60.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 60.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 59.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 59.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 59.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 59.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 59.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 59.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 59.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 59.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 58.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 58.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 57.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 57.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 57.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 56.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 56.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 56.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 55.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 55.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 55.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 55.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 54.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 54.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 54.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 54.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 53.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 53.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 53.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 53.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 53.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 53.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 53.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 53.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 52.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 52.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 52.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 52.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 52.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 51.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 50.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 50.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 50.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 50.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 49.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 49.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 49.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 49.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 49.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 49.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 49.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 49.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 48.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 48.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 48.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 48.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 48.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 47.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 47.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 47.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 47.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 47.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 46.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 46.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 46.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 45.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 45.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 44.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 44.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 44.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 43.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 43.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 43.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 43.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 42.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 42.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 42.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 42.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 41.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 41.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 41.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 41.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 41.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 40.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 39.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 39.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 39.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 39.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 39.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 39.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 38.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 38.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 37.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 37.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 35.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 33.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 33.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 29.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 28.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 27.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 26.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 20.2
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Brain - Putamen (basal ganglia)
Average nTPM: 55.3
Samples: 205

Max nTPM: 84.8
Min nTPM: 20.2
Std nTPM: 12.8
Median nTPM: 54.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 84.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 79.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 78.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 77.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 76.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 76.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 75.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 75.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 75.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 74.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 74.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 74.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 74.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 73.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 73.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 73.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 73.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 72.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 72.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 72.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 72.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 71.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 71.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 71.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 71.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 71.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 70.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 70.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 70.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 69.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 69.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 69.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 69.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 69.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 69.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 69.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 69.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 69.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 69.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 69.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 68.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 68.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 68.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 68.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 67.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 66.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 66.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 66.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 66.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 65.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 65.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 65.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 65.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 65.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 65.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 64.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 64.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 64.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 64.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 64.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 64.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 63.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 63.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 63.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 63.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 63.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 62.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 62.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 62.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 61.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 61.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 61.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 61.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 60.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 60.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 60.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 60.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 60.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 60.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 59.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 59.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 59.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 59.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 59.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 58.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 58.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 58.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 58.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 57.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 57.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 57.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 56.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 56.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 56.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 56.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 56.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 55.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 55.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 55.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 55.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 55.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 54.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 54.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 54.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 54.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 54.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 54.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 54.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 54.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 54.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 53.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 53.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 53.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 53.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 52.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 52.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 52.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 52.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 52.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 52.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 51.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 51.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 51.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 51.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 51.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 50.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 50.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 50.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 50.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 50.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 50.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 50.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 50.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 50.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 50.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 50.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 50.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 49.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 49.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 49.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 48.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 48.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 47.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 47.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 47.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 47.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 47.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 47.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 47.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 46.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 46.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 46.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 46.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 46.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 45.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 45.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 45.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 45.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 44.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 44.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 44.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 43.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 43.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 43.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 43.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 43.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 42.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 42.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 42.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 42.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 42.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 41.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 41.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 41.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 41.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 41.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 40.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 40.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 39.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 39.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 38.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 38.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 38.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 38.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 37.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 37.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 37.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 36.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 36.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 36.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 35.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 34.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 34.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 33.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 33.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 30.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 30.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 30.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 30.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 30.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 28.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 27.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 27.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 20.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

217.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 180.2
FF:10164-103B2 76 years, female 180.2
Nucleus accumbens
Scaled Tags Per Million: 217.0
FF:10037-101F1 23-56 years, mixed 217.0
Putamen
Scaled Tags Per Million: 210.4
FF:10176-103C5 60 years, female 210.4
Globus pallidus
Scaled Tags Per Million: 121.2
FF:10161-103A8 76 years, female 134.9
FF:10175-103C4 60 years, female 107.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.9
Pig sample Sample description nTPM
Caudate
nTPM: 54.8
Samples: 4

Max nTPM: 61.1
Min nTPM: 43.8
Sample A Female 43.8
Sample B Female 61.0
Sample C Male 61.1
Sample D Male 53.2
Putamen
nTPM: 56.2
Samples: 4

Max nTPM: 67.7
Min nTPM: 47.7
Sample A Female 50.9
Sample B Female 47.7
Sample C Male 58.6
Sample D Male 67.7
Septum
nTPM: 55.2
Samples: 4

Max nTPM: 68.0
Min nTPM: 50.4
Sample A Female 51.8
Sample B Female 50.6
Sample C Male 68.0
Sample D Male 50.4
Ventral pallidum
nTPM: 61.0
Samples: 4

Max nTPM: 92.1
Min nTPM: 46.9
Sample A Female 46.9
Sample B Female 48.3
Sample C Male 92.1
Sample D Male 56.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 108.2
Samples: 4

Max nTPM: 112.9
Min nTPM: 106.4
Sample A Male 107.1
Sample B Male 112.9
Sample C Female 106.4
Sample D Female 106.5
Septum
nTPM: 115.6
Samples: 4

Max nTPM: 131.8
Min nTPM: 104.0
Sample A Male 131.8
Sample B Male 104.9
Sample C Female 104.0
Sample D Female 121.8
Ventral forebrain
nTPM: 117.3
Samples: 4

Max nTPM: 124.9
Min nTPM: 103.5
Sample A Male 118.2
Sample B Male 122.7
Sample C Female 103.5
Sample D Female 124.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.2
69752065 Antisense, RP_050505_01_A07, Mouse strain C57BL/6J (56 days, male) 11.2
Pallidum
Expression energy: 9.6
69752065 Antisense, RP_050505_01_A07, Mouse strain C57BL/6J (56 days, male) 9.6

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